RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 ORAI2Q96SN7 254 aa12.2□□□□□ -0.46
SYN3-212ENST00000483062 MYOM2P54296 1465 aa12.2□□□□□ -0.46
SYN3-212ENST00000483062 APLP2Q06481 763 aa12.18□□□□□ -0.46
SYN3-212ENST00000483062 GJD4Q96KN9 370 aaPredicted RBP12.18□□□□□ -0.46
SYN3-212ENST00000483062 E9PCH4 1651 aa12.17□□□□□ -0.46
SYN3-212ENST00000483062 BLMP54132 1417 aaPredicted RBP12.17□□□□□ -0.46
SYN3-212ENST00000483062 PRAG1Q86YV5 1406 aa12.16□□□□□ -0.46
SYN3-212ENST00000483062 ROBO2Q9HCK4 1378 aa12.15□□□□□ -0.46
SYN3-212ENST00000483062 COL22A1Q8NFW1 1626 aaPredicted RBP12.15□□□□□ -0.47
SYN3-212ENST00000483062 DEFB132Q7Z7B7 95 aa12.14□□□□□ -0.47
SYN3-212ENST00000483062 NALCNQ8IZF0 1738 aa12.14□□□□□ -0.47
SYN3-212ENST00000483062 ROCK1Q13464 1354 aa12.13□□□□□ -0.47
SYN3-212ENST00000483062 LRP5O75197 1615 aa12.12□□□□□ -0.47
SYN3-212ENST00000483062 IQGAP3Q86VI3 1631 aa12.12□□□□□ -0.47
SYN3-212ENST00000483062 FAM50AQ14320 339 aaKnown RBP12.12□□□□□ -0.47
SYN3-212ENST00000483062 NUP155O75694 1391 aa12.12□□□□□ -0.47
SYN3-212ENST00000483062 PXDNQ92626 1479 aa12.12□□□□□ -0.47
SYN3-212ENST00000483062 SLIT2O94813 1529 aa12.11□□□□□ -0.47
SYN3-212ENST00000483062 RALGAPBQ86X10 1494 aa12.11□□□□□ -0.47
SYN3-212ENST00000483062 ONECUT3O60422 494 aaPredicted RBP12.11□□□□□ -0.47
SYN3-212ENST00000483062 UNC5CLQ8IV45 518 aa12.11□□□□□ -0.47
SYN3-212ENST00000483062 NEXMIFQ5QGS0 1516 aa12.1□□□□□ -0.47
SYN3-212ENST00000483062 NPHP3Q7Z494 1330 aa12.1□□□□□ -0.47
SYN3-212ENST00000483062 GLI3P10071 1580 aa12.09□□□□□ -0.47
SYN3-212ENST00000483062 HRCP23327 699 aa12.09□□□□□ -0.47
SYN3-212ENST00000483062 ZNF326Q5BKZ1 582 aaKnown RBP12.09□□□□□ -0.47
SYN3-212ENST00000483062 HFM1A2PYH4 1435 aa12.07□□□□□ -0.48
SYN3-212ENST00000483062 FOXO3O43524 673 aa12.07□□□□□ -0.48
SYN3-212ENST00000483062 SEPT12Q8IYM1 358 aa12.07□□□□□ -0.48
SYN3-212ENST00000483062 SLC4A1APQ9BWU0 796 aaKnown RBP12.07□□□□□ -0.48
SYN3-212ENST00000483062 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
SYN3-212ENST00000483062 VPS72Q15906 364 aa12.06□□□□□ -0.48
SYN3-212ENST00000483062 ESCO1Q5FWF5 840 aa12.06□□□□□ -0.48
SYN3-212ENST00000483062 XPCQ01831 940 aaPredicted RBP12.05□□□□□ -0.48
SYN3-212ENST00000483062 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
SYN3-212ENST00000483062 SPATA31A3Q5VYP0 1347 aa12.05□□□□□ -0.48
SYN3-212ENST00000483062 SPHKAPQ2M3C7 1700 aa12.04□□□□□ -0.48
SYN3-212ENST00000483062 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
SYN3-212ENST00000483062 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
SYN3-212ENST00000483062 SF3B2Q13435 895 aaKnown RBP12.03□□□□□ -0.48
SYN3-212ENST00000483062 KRT27Q7Z3Y8 459 aa12.03□□□□□ -0.48
SYN3-212ENST00000483062 CDC42BPGQ6DT37 1551 aa12.02□□□□□ -0.49
SYN3-212ENST00000483062 LRPPRCP42704 1394 aaKnown RBP12.02□□□□□ -0.49
SYN3-212ENST00000483062 MARF1Q9Y4F3 1742 aaKnown RBP12.01□□□□□ -0.49
SYN3-212ENST00000483062 RPGRIP1LQ68CZ1 1315 aa12.01□□□□□ -0.49
SYN3-212ENST00000483062 CLTCL1P53675 1640 aa12□□□□□ -0.49
SYN3-212ENST00000483062 BAG6P46379 1132 aa12□□□□□ -0.49
SYN3-212ENST00000483062 U3KPZ7 1027 aaPredicted RBP12□□□□□ -0.49
SYN3-212ENST00000483062 NAIPQ13075 1403 aa11.99□□□□□ -0.49
SYN3-212ENST00000483062 BRWD3Q6RI45 1802 aa11.99□□□□□ -0.49
SYN3-212ENST00000483062 DISP2A7MBM2 1401 aa11.98□□□□□ -0.49
SYN3-212ENST00000483062 TECPR2O15040 1411 aa11.98□□□□□ -0.49
SYN3-212ENST00000483062 USP32Q8NFA0 1604 aa11.97□□□□□ -0.49
SYN3-212ENST00000483062 FAM83GA6ND36 823 aa11.97□□□□□ -0.49
SYN3-212ENST00000483062 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
SYN3-212ENST00000483062 KRT28Q7Z3Y7 464 aa11.97□□□□□ -0.49
SYN3-212ENST00000483062 WAPLQ7Z5K2 1190 aa11.97□□□□□ -0.49
SYN3-212ENST00000483062 CCDC144AA2RUR9 1427 aa11.96□□□□□ -0.49
SYN3-212ENST00000483062 NUTM2FA1L443 756 aa11.96□□□□□ -0.49
SYN3-212ENST00000483062 R3HDM1Q15032 1099 aaKnown RBP11.96□□□□□ -0.49
SYN3-212ENST00000483062 CABLES1Q8TDN4 633 aa11.96□□□□□ -0.49
SYN3-212ENST00000483062 ABCC11Q96J66 1382 aa11.95□□□□□ -0.5
SYN3-212ENST00000483062 KIF1BO60333 1816 aa11.95□□□□□ -0.5
SYN3-212ENST00000483062 RRBP1Q9P2E9 1410 aaKnown RBP11.94□□□□□ -0.5
SYN3-212ENST00000483062 PLEKHH1Q9ULM0 1364 aa11.94□□□□□ -0.5
SYN3-212ENST00000483062 CAMKK2Q96RR4 588 aa11.94□□□□□ -0.5
SYN3-212ENST00000483062 TNS3Q68CZ2 1445 aa11.94□□□□□ -0.5
SYN3-212ENST00000483062 SBNO1A3KN83 1393 aa11.93□□□□□ -0.5
SYN3-212ENST00000483062 YY1P25490 414 aa11.93□□□□□ -0.5
SYN3-212ENST00000483062 FAM98CQ17RN3 349 aaKnown RBP11.93□□□□□ -0.5
SYN3-212ENST00000483062 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
SYN3-212ENST00000483062 SIRT1Q96EB6 747 aa11.92□□□□□ -0.5
SYN3-212ENST00000483062 NWD2Q9ULI1 1742 aa11.91□□□□□ -0.5
SYN3-212ENST00000483062 PSME1Q06323 249 aa11.91□□□□□ -0.5
SYN3-212ENST00000483062 EZH2Q15910 746 aaKnown RBP11.91□□□□□ -0.5
SYN3-212ENST00000483062 FAM182BQ5T319 152 aa11.91□□□□□ -0.5
SYN3-212ENST00000483062 CCDC9Q9Y3X0 531 aaKnown RBP11.91□□□□□ -0.5
SYN3-212ENST00000483062 ITGAEP38570 1179 aa11.9□□□□□ -0.5
SYN3-212ENST00000483062 STK26Q9P289 416 aa11.9□□□□□ -0.5
SYN3-212ENST00000483062 PHF8Q9UPP1 1060 aa11.9□□□□□ -0.5
SYN3-212ENST00000483062 ARHGEF10O15013 1369 aa11.9□□□□□ -0.5
SYN3-212ENST00000483062 SPATA31A5Q5VU36 1347 aa11.89□□□□□ -0.51
SYN3-212ENST00000483062 SPATA31A7Q8IWB4 1347 aa11.89□□□□□ -0.51
SYN3-212ENST00000483062 NRXN1Q9ULB1 1477 aa11.89□□□□□ -0.51
SYN3-212ENST00000483062 PLCH1Q4KWH8 1693 aa11.88□□□□□ -0.51
SYN3-212ENST00000483062 TMEM132EQ6IEE7 984 aa11.88□□□□□ -0.51
SYN3-212ENST00000483062 BTG4Q9NY30 223 aa11.88□□□□□ -0.51
SYN3-212ENST00000483062 FMN2Q9NZ56 1722 aa11.88□□□□□ -0.51
SYN3-212ENST00000483062 KIF1AQ12756 1690 aa11.87□□□□□ -0.51
SYN3-212ENST00000483062 HAP1P54257 671 aaPredicted RBP11.87□□□□□ -0.51
SYN3-212ENST00000483062 PPLO60437 1756 aa11.87□□□□□ -0.51
SYN3-212ENST00000483062 PARD3Q8TEW0 1356 aa11.86□□□□□ -0.51
SYN3-212ENST00000483062 NRAPQ86VF7 1730 aa11.86□□□□□ -0.51
SYN3-212ENST00000483062 SPATA31E1Q6ZUB1 1445 aa11.86□□□□□ -0.51
SYN3-212ENST00000483062 YTHDC2Q9H6S0 1430 aaKnown RBP11.86□□□□□ -0.51
SYN3-212ENST00000483062 A0A0G2JS52 829 aa11.85□□□□□ -0.51
SYN3-212ENST00000483062 MYT1Q01538 1121 aa11.85□□□□□ -0.51
SYN3-212ENST00000483062 UTRNP46939 3433 aa11.85□□□□□ -0.51
SYN3-212ENST00000483062 THSD7AQ9UPZ6 1657 aa11.84□□□□□ -0.51
SYN3-212ENST00000483062 ANKRD30BQ9BXX2 1392 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms