RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 INSM1Q01101 510 aaPredicted RBP11.42□□□□□ -0.58
SGIP1-210ENST00000483060 SNIP1Q8TAD8 396 aaKnown RBP11.42□□□□□ -0.58
SGIP1-210ENST00000483060 FECHP22830 423 aa11.41□□□□□ -0.58
SGIP1-210ENST00000483060 RBM26Q5T8P6 1007 aaKnown RBP11.41□□□□□ -0.58
SGIP1-210ENST00000483060 TESPA1A2RU30 521 aaPredicted RBP11.39□□□□□ -0.59
SGIP1-210ENST00000483060 SMPD1P17405 629 aa11.39□□□□□ -0.59
SGIP1-210ENST00000483060 Q3C1V9 767 aa11.38□□□□□ -0.59
SGIP1-210ENST00000483060 RNF19BQ6ZMZ0 732 aa11.38□□□□□ -0.59
SGIP1-210ENST00000483060 SENP2Q9HC62 589 aa11.38□□□□□ -0.59
SGIP1-210ENST00000483060 ATP13A2Q9NQ11 1180 aa11.38□□□□□ -0.59
SGIP1-210ENST00000483060 TRIM32Q13049 653 aa11.37□□□□□ -0.59
SGIP1-210ENST00000483060 GPR37O15354 613 aa11.36□□□□□ -0.59
SGIP1-210ENST00000483060 NLRP7Q8WX94 980 aa11.36□□□□□ -0.59
SGIP1-210ENST00000483060 MMP16P51512 607 aa11.35□□□□□ -0.59
SGIP1-210ENST00000483060 REPIN1Q9BWE0 567 aaKnown RBP11.35□□□□□ -0.59
SGIP1-210ENST00000483060 MRGPRX2Q96LB1 330 aa11.34□□□□□ -0.59
SGIP1-210ENST00000483060 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
SGIP1-210ENST00000483060 TERTO14746 1132 aaKnown RBP11.33□□□□□ -0.6
SGIP1-210ENST00000483060 SNRPBP14678 240 aaKnown RBP11.32□□□□□ -0.6
SGIP1-210ENST00000483060 KIFC2Q96AC6 838 aa11.32□□□□□ -0.6
SGIP1-210ENST00000483060 PHOX2BQ99453 314 aa11.32□□□□□ -0.6
SGIP1-210ENST00000483060 J3QL48 77 aa11.31□□□□□ -0.6
SGIP1-210ENST00000483060 USB1Q9BQ65 265 aaKnown RBP11.29□□□□□ -0.6
SGIP1-210ENST00000483060 DXOO77932 396 aaKnown RBP11.28□□□□□ -0.6
SGIP1-210ENST00000483060 HPS1Q92902 700 aa11.27□□□□□ -0.61
SGIP1-210ENST00000483060 CD46P15529 392 aa11.26□□□□□ -0.61
SGIP1-210ENST00000483060 WNT7BP56706 349 aa11.26□□□□□ -0.61
SGIP1-210ENST00000483060 KDM4AO75164 1064 aa11.24□□□□□ -0.61
SGIP1-210ENST00000483060 LCE2CQ5TA81 110 aa11.24□□□□□ -0.61
SGIP1-210ENST00000483060 RC3H1Q5TC82 1133 aaKnown RBP11.24□□□□□ -0.61
SGIP1-210ENST00000483060 USP46P62068 366 aa11.23□□□□□ -0.61
SGIP1-210ENST00000483060 GPIHBP1Q8IV16 184 aa11.23□□□□□ -0.61
SGIP1-210ENST00000483060 CCDC24Q8N4L8 307 aa11.23□□□□□ -0.61
SGIP1-210ENST00000483060 SLC16A10Q8TF71 515 aa11.22□□□□□ -0.61
SGIP1-210ENST00000483060 FAM181BA6NEQ2 426 aa11.21□□□□□ -0.61
SGIP1-210ENST00000483060 SKOR1P84550 965 aa11.2□□□□□ -0.62
SGIP1-210ENST00000483060 ALDH1A1P00352 501 aa11.17□□□□□ -0.62
SGIP1-210ENST00000483060 NXF1Q9UBU9 619 aaKnown RBP11.17□□□□□ -0.62
SGIP1-210ENST00000483060 JUNDP17535 347 aa11.15□□□□□ -0.62
SGIP1-210ENST00000483060 NPAS3Q8IXF0 933 aa11.15□□□□□ -0.62
SGIP1-210ENST00000483060 HOXA2O43364 376 aa11.14□□□□□ -0.63
SGIP1-210ENST00000483060 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
SGIP1-210ENST00000483060 HLA-CQ95604 372 aa11.13□□□□□ -0.63
SGIP1-210ENST00000483060 EHBP1Q8NDI1 1231 aa11.12□□□□□ -0.63
SGIP1-210ENST00000483060 IRF7Q92985 503 aa11.12□□□□□ -0.63
SGIP1-210ENST00000483060 SIAH2O43255 324 aa11.11□□□□□ -0.63
SGIP1-210ENST00000483060 WASF2Q9Y6W5 498 aa11.11□□□□□ -0.63
SGIP1-210ENST00000483060 CAPN5O15484 640 aaPredicted RBP11.1□□□□□ -0.63
SGIP1-210ENST00000483060 MDM2Q00987 491 aaPredicted RBP11.1□□□□□ -0.63
SGIP1-210ENST00000483060 GMPRP36959 345 aa11.09□□□□□ -0.63
SGIP1-210ENST00000483060 ZSCAN1Q8NBB4 408 aa11.09□□□□□ -0.63
SGIP1-210ENST00000483060 NUDT12Q9BQG2 462 aa11.09□□□□□ -0.63
SGIP1-210ENST00000483060 IRF6O14896 467 aa11.08□□□□□ -0.64
SGIP1-210ENST00000483060 TRIM46Q7Z4K8 759 aa11.08□□□□□ -0.64
SGIP1-210ENST00000483060 RETREG3Q86VR2 466 aa11.08□□□□□ -0.64
SGIP1-210ENST00000483060 BMP1P13497 986 aa11.07□□□□□ -0.64
SGIP1-210ENST00000483060 GUCA2AQ02747 115 aa11.06□□□□□ -0.64
SGIP1-210ENST00000483060 PTCRAQ6ISU1 281 aaPredicted RBP11.06□□□□□ -0.64
SGIP1-210ENST00000483060 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
SGIP1-210ENST00000483060 SYMPKQ92797 1274 aaKnown RBP11.05□□□□□ -0.64
SGIP1-210ENST00000483060 H3BM21 787 aa11.04□□□□□ -0.64
SGIP1-210ENST00000483060 LORP23490 312 aaPredicted RBP11.03□□□□□ -0.64
SGIP1-210ENST00000483060 NUTM1Q86Y26 1132 aa11.03□□□□□ -0.64
SGIP1-210ENST00000483060 GPCPD1Q9NPB8 672 aa11.03□□□□□ -0.64
SGIP1-210ENST00000483060 CLCN1P35523 988 aa11.02□□□□□ -0.65
SGIP1-210ENST00000483060 SH3BP2P78314 561 aa11.02□□□□□ -0.65
SGIP1-210ENST00000483060 CCNYL3P0C7X3 344 aa11.01□□□□□ -0.65
SGIP1-210ENST00000483060 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
SGIP1-210ENST00000483060 TULP1O00294 542 aaPredicted RBP11□□□□□ -0.65
SGIP1-210ENST00000483060 MS4A1P11836 297 aa11□□□□□ -0.65
SGIP1-210ENST00000483060 PLEKHG3A1L390 1219 aa10.99□□□□□ -0.65
SGIP1-210ENST00000483060 VEGFBP49765 207 aa10.99□□□□□ -0.65
SGIP1-210ENST00000483060 ZFP42Q96MM3 310 aa10.99□□□□□ -0.65
SGIP1-210ENST00000483060 FDX1P10109 184 aa10.98□□□□□ -0.65
SGIP1-210ENST00000483060 PTPRNQ16849 979 aa10.98□□□□□ -0.65
SGIP1-210ENST00000483060 C6orf229H3BNL8 230 aa10.97□□□□□ -0.65
SGIP1-210ENST00000483060 PLCB2Q00722 1185 aa10.97□□□□□ -0.65
SGIP1-210ENST00000483060 MPNDQ8N594 471 aa10.97□□□□□ -0.65
SGIP1-210ENST00000483060 CCDC102AQ96A19 550 aa10.97□□□□□ -0.65
SGIP1-210ENST00000483060 UNC93B1Q9H1C4 597 aa10.97□□□□□ -0.65
SGIP1-210ENST00000483060 ERBB4Q15303 1308 aa10.97□□□□□ -0.65
SGIP1-210ENST00000483060 SCARF1Q14162 830 aa10.96□□□□□ -0.65
SGIP1-210ENST00000483060 EVA1BQ9NVM1 165 aa10.96□□□□□ -0.65
SGIP1-210ENST00000483060 VARSP26640 1264 aaKnown RBP10.95□□□□□ -0.66
SGIP1-210ENST00000483060 KRI1Q8N9T8 703 aaKnown RBP10.95□□□□□ -0.66
SGIP1-210ENST00000483060 PCDHGC3Q9UN70 934 aa10.94□□□□□ -0.66
SGIP1-210ENST00000483060 TLL2Q9Y6L7 1015 aa10.94□□□□□ -0.66
SGIP1-210ENST00000483060 KCNH2Q12809 1159 aa10.93□□□□□ -0.66
SGIP1-210ENST00000483060 NNTQ13423 1086 aa10.93□□□□□ -0.66
SGIP1-210ENST00000483060 MRPL14Q6P1L8 145 aaKnown RBP10.93□□□□□ -0.66
SGIP1-210ENST00000483060 BAP1Q92560 729 aa10.93□□□□□ -0.66
SGIP1-210ENST00000483060 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
SGIP1-210ENST00000483060 ZNF511Q8NB15 262 aa10.91□□□□□ -0.66
SGIP1-210ENST00000483060 ADH1CP00326 375 aa10.9□□□□□ -0.66
SGIP1-210ENST00000483060 VSIG8P0DPA2 414 aa10.89□□□□□ -0.67
SGIP1-210ENST00000483060 DESI1Q6ICB0 168 aa10.89□□□□□ -0.67
SGIP1-210ENST00000483060 PURBQ96QR8 312 aaKnown RBP10.89□□□□□ -0.67
SGIP1-210ENST00000483060 SPDYE5A6NIY4 337 aa10.88□□□□□ -0.67
SGIP1-210ENST00000483060 TIMP2P16035 220 aa10.88□□□□□ -0.67
SGIP1-210ENST00000483060 WDR4P57081 412 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms