RNA–Protein interactions for RNA: ENST00000482961.1

GTDC1-216, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best)

Gene GTDC1, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-216ENST00000482961 SPRYD3Q8NCJ5 442 aa7.62□□□□□ -1.19
GTDC1-216ENST00000482961 PXYLP1Q8TE99 480 aa7.62□□□□□ -1.19
GTDC1-216ENST00000482961 OATP04181 439 aa7.61□□□□□ -1.19
GTDC1-216ENST00000482961 NPAS3Q8IXF0 933 aa7.61□□□□□ -1.19
GTDC1-216ENST00000482961 REPIN1Q9BWE0 567 aaKnown RBP7.6□□□□□ -1.19
GTDC1-216ENST00000482961 ERBB4Q15303 1308 aa7.59□□□□□ -1.19
GTDC1-216ENST00000482961 BRICD5Q6PL45 260 aa7.59□□□□□ -1.19
GTDC1-216ENST00000482961 H3BM21 787 aa7.58□□□□□ -1.2
GTDC1-216ENST00000482961 BMP1P13497 986 aa7.58□□□□□ -1.2
GTDC1-216ENST00000482961 MSS51Q4VC12 460 aa7.58□□□□□ -1.2
GTDC1-216ENST00000482961 KCTD17Q8N5Z5 321 aa7.58□□□□□ -1.2
GTDC1-216ENST00000482961 SALL2Q9Y467 1007 aaPredicted RBP7.58□□□□□ -1.2
GTDC1-216ENST00000482961 DDX11L8A8MPP1 907 aa7.57□□□□□ -1.2
GTDC1-216ENST00000482961 ALDH1A1P00352 501 aa7.57□□□□□ -1.2
GTDC1-216ENST00000482961 RNF19BQ6ZMZ0 732 aa7.57□□□□□ -1.2
GTDC1-216ENST00000482961 FCHSD2O94868 740 aa7.56□□□□□ -1.2
GTDC1-216ENST00000482961 RC3H1Q5TC82 1133 aaKnown RBP7.56□□□□□ -1.2
GTDC1-216ENST00000482961 METTL3Q86U44 580 aaKnown RBP7.55□□□□□ -1.2
GTDC1-216ENST00000482961 TRIM46Q7Z4K8 759 aa7.54□□□□□ -1.2
GTDC1-216ENST00000482961 CCDC24Q8N4L8 307 aa7.54□□□□□ -1.2
GTDC1-216ENST00000482961 DAXXQ9UER7 740 aaPredicted RBP7.54□□□□□ -1.2
GTDC1-216ENST00000482961 CAPN5O15484 640 aaPredicted RBP7.53□□□□□ -1.2
GTDC1-216ENST00000482961 GCGRP47871 477 aa7.53□□□□□ -1.2
GTDC1-216ENST00000482961 SKOR1P84550 965 aa7.52□□□□□ -1.21
GTDC1-216ENST00000482961 KCNMA1Q12791 1236 aa7.52□□□□□ -1.21
GTDC1-216ENST00000482961 MMP16P51512 607 aa7.51□□□□□ -1.21
GTDC1-216ENST00000482961 ARHGEF1Q92888 912 aaKnown RBP7.51□□□□□ -1.21
GTDC1-216ENST00000482961 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.51□□□□□ -1.21
GTDC1-216ENST00000482961 WNT7BP56706 349 aa7.5□□□□□ -1.21
GTDC1-216ENST00000482961 GRIPAP1Q4V328 841 aa7.5□□□□□ -1.21
GTDC1-216ENST00000482961 CFAP44Q96MT7 982 aa7.5□□□□□ -1.21
GTDC1-216ENST00000482961 WASF2Q9Y6W5 498 aa7.5□□□□□ -1.21
GTDC1-216ENST00000482961 NLRP7Q8WX94 980 aa7.49□□□□□ -1.21
GTDC1-216ENST00000482961 ZFP42Q96MM3 310 aa7.49□□□□□ -1.21
GTDC1-216ENST00000482961 Q3C1V9 767 aa7.48□□□□□ -1.21
GTDC1-216ENST00000482961 SULF1Q8IWU6 871 aa7.48□□□□□ -1.21
GTDC1-216ENST00000482961 TMEM151AQ8N4L1 468 aa7.48□□□□□ -1.21
GTDC1-216ENST00000482961 GDF11O95390 407 aa7.47□□□□□ -1.21
GTDC1-216ENST00000482961 GSK3AP49840 483 aa7.47□□□□□ -1.21
GTDC1-216ENST00000482961 DXOO77932 396 aaKnown RBP7.46□□□□□ -1.22
GTDC1-216ENST00000482961 PAXIP1Q6ZW49 1069 aaPredicted RBP7.46□□□□□ -1.22
GTDC1-216ENST00000482961 USB1Q9BQ65 265 aaKnown RBP7.46□□□□□ -1.22
GTDC1-216ENST00000482961 HIC1Q14526 733 aa7.45□□□□□ -1.22
GTDC1-216ENST00000482961 EHBP1Q8NDI1 1231 aa7.45□□□□□ -1.22
GTDC1-216ENST00000482961 RASSF7Q02833 373 aa7.44□□□□□ -1.22
GTDC1-216ENST00000482961 SOBPA7XYQ1 873 aa7.43□□□□□ -1.22
GTDC1-216ENST00000482961 SIAH2O43255 324 aa7.43□□□□□ -1.22
GTDC1-216ENST00000482961 VSIG8P0DPA2 414 aa7.42□□□□□ -1.22
GTDC1-216ENST00000482961 KCNV2Q8TDN2 545 aa7.42□□□□□ -1.22
GTDC1-216ENST00000482961 SCARF1Q14162 830 aa7.4□□□□□ -1.22
GTDC1-216ENST00000482961 PURBQ96QR8 312 aaKnown RBP7.4□□□□□ -1.22
GTDC1-216ENST00000482961 RNF225M0QZC1 329 aaPredicted RBP7.39□□□□□ -1.23
GTDC1-216ENST00000482961 MRPL14Q6P1L8 145 aaKnown RBP7.39□□□□□ -1.23
GTDC1-216ENST00000482961 GNPATO15228 680 aa7.38□□□□□ -1.23
GTDC1-216ENST00000482961 GPAT2Q6NUI2 795 aa7.37□□□□□ -1.23
GTDC1-216ENST00000482961 PHOX2BQ99453 314 aa7.37□□□□□ -1.23
GTDC1-216ENST00000482961 SEMA3EO15041 775 aa7.36□□□□□ -1.23
GTDC1-216ENST00000482961 PTCRAQ6ISU1 281 aaPredicted RBP7.36□□□□□ -1.23
GTDC1-216ENST00000482961 ADAMTS8Q9UP79 889 aa7.36□□□□□ -1.23
GTDC1-216ENST00000482961 HLA-CQ95604 372 aa7.35□□□□□ -1.23
GTDC1-216ENST00000482961 KDM4AO75164 1064 aa7.34□□□□□ -1.23
GTDC1-216ENST00000482961 JUNDP17535 347 aa7.34□□□□□ -1.23
GTDC1-216ENST00000482961 SH3BP2P78314 561 aa7.34□□□□□ -1.23
GTDC1-216ENST00000482961 NNTQ13423 1086 aa7.34□□□□□ -1.23
GTDC1-216ENST00000482961 RBM26Q5T8P6 1007 aaKnown RBP7.34□□□□□ -1.23
GTDC1-216ENST00000482961 NUDT12Q9BQG2 462 aa7.34□□□□□ -1.23
GTDC1-216ENST00000482961 TLL2Q9Y6L7 1015 aa7.34□□□□□ -1.23
GTDC1-216ENST00000482961 MAN1A2O60476 641 aa7.33□□□□□ -1.24
GTDC1-216ENST00000482961 PPFIA3O75145 1194 aa7.33□□□□□ -1.24
GTDC1-216ENST00000482961 XP32Q5T750 250 aa7.33□□□□□ -1.24
GTDC1-216ENST00000482961 PLEKHG3A1L390 1219 aa7.32□□□□□ -1.24
GTDC1-216ENST00000482961 CD46P15529 392 aa7.32□□□□□ -1.24
GTDC1-216ENST00000482961 WDR4P57081 412 aaKnown RBP7.32□□□□□ -1.24
GTDC1-216ENST00000482961 IGHA1P01876 353 aa7.31□□□□□ -1.24
GTDC1-216ENST00000482961 SYMPKQ92797 1274 aaKnown RBP7.31□□□□□ -1.24
GTDC1-216ENST00000482961 CNTNAP3BQ96NU0 1288 aa7.31□□□□□ -1.24
GTDC1-216ENST00000482961 CNTNAP3Q9BZ76 1288 aa7.31□□□□□ -1.24
GTDC1-216ENST00000482961 TIMP2P16035 220 aa7.3□□□□□ -1.24
GTDC1-216ENST00000482961 C6orf118Q5T5N4 469 aa7.3□□□□□ -1.24
GTDC1-216ENST00000482961 DNMT3AQ9Y6K1 912 aaPredicted RBP7.3□□□□□ -1.24
GTDC1-216ENST00000482961 ADH1CP00326 375 aa7.29□□□□□ -1.24
GTDC1-216ENST00000482961 IRS1P35568 1242 aa7.29□□□□□ -1.24
GTDC1-216ENST00000482961 GUCA2AQ02747 115 aa7.29□□□□□ -1.24
GTDC1-216ENST00000482961 LINC01559Q495D7 138 aa7.29□□□□□ -1.24
GTDC1-216ENST00000482961 USP46P62068 366 aa7.28□□□□□ -1.24
GTDC1-216ENST00000482961 KRT76Q01546 638 aa7.28□□□□□ -1.24
GTDC1-216ENST00000482961 HOXA2O43364 376 aa7.27□□□□□ -1.25
GTDC1-216ENST00000482961 SVOPQ8N4V2 548 aa7.27□□□□□ -1.25
GTDC1-216ENST00000482961 GPR161Q8N6U8 529 aaKnown RBP7.27□□□□□ -1.25
GTDC1-216ENST00000482961 BAP1Q92560 729 aa7.27□□□□□ -1.25
GTDC1-216ENST00000482961 GPR37O15354 613 aa7.26□□□□□ -1.25
GTDC1-216ENST00000482961 VARSP26640 1264 aaKnown RBP7.26□□□□□ -1.25
GTDC1-216ENST00000482961 UNC93B1Q9H1C4 597 aa7.26□□□□□ -1.25
GTDC1-216ENST00000482961 CCNYL3P0C7X3 344 aa7.25□□□□□ -1.25
GTDC1-216ENST00000482961 ZNF385CQ66K41 422 aaPredicted RBP7.25□□□□□ -1.25
GTDC1-216ENST00000482961 RETREG3Q86VR2 466 aa7.25□□□□□ -1.25
GTDC1-216ENST00000482961 ZIC2O95409 532 aaPredicted RBP7.24□□□□□ -1.25
GTDC1-216ENST00000482961 BMP2P12643 396 aa7.24□□□□□ -1.25
GTDC1-216ENST00000482961 FOXK2Q01167 660 aa7.24□□□□□ -1.25
GTDC1-216ENST00000482961 SMYD5Q6GMV2 418 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms