RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 C1orf167Q5SNV9 1468 aa21.88■■□□□ 1.09
COL16A1-213ENST00000482910 COL16A1Q07092 1604 aaPredicted RBP21.87■■□□□ 1.09
COL16A1-213ENST00000482910 PLEKHH1Q9ULM0 1364 aa21.87■■□□□ 1.09
COL16A1-213ENST00000482910 SIN3AQ96ST3 1273 aa21.86■■□□□ 1.09
COL16A1-213ENST00000482910 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
COL16A1-213ENST00000482910 MED1Q15648 1581 aaPredicted RBP21.84■■□□□ 1.09
COL16A1-213ENST00000482910 L3MBTL2Q969R5 705 aa21.83■■□□□ 1.09
COL16A1-213ENST00000482910 PRAM1Q96QH2 718 aa21.81■■□□□ 1.08
COL16A1-213ENST00000482910 JCADQ9P266 1359 aa21.81■■□□□ 1.08
COL16A1-213ENST00000482910 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
COL16A1-213ENST00000482910 ADGRB2O60241 1585 aa21.8■■□□□ 1.08
COL16A1-213ENST00000482910 NEUROD1Q13562 356 aa21.8■■□□□ 1.08
COL16A1-213ENST00000482910 TRAK1Q9UPV9 953 aa21.8■■□□□ 1.08
COL16A1-213ENST00000482910 POGKQ9P215 609 aa21.79■■□□□ 1.08
COL16A1-213ENST00000482910 ARHGEF28Q8N1W1 1705 aaKnown RBP21.78■■□□□ 1.08
COL16A1-213ENST00000482910 SHPRHQ149N8 1683 aa21.76■■□□□ 1.07
COL16A1-213ENST00000482910 ORAI2Q96SN7 254 aa21.76■■□□□ 1.07
COL16A1-213ENST00000482910 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
COL16A1-213ENST00000482910 NBPF1Q3BBV0 1214 aa21.73■■□□□ 1.07
COL16A1-213ENST00000482910 SPATA31A6Q5VVP1 1343 aa21.73■■□□□ 1.07
COL16A1-213ENST00000482910 SAFB2Q14151 953 aaKnown RBP eCLIP21.72■■□□□ 1.07
COL16A1-213ENST00000482910 ESCO1Q5FWF5 840 aa21.72■■□□□ 1.07
COL16A1-213ENST00000482910 LRRC59Q96AG4 307 aaKnown RBP21.72■■□□□ 1.07
COL16A1-213ENST00000482910 SOS2Q07890 1332 aaPredicted RBP21.72■■□□□ 1.07
COL16A1-213ENST00000482910 KIF1AQ12756 1690 aa21.72■■□□□ 1.07
COL16A1-213ENST00000482910 ANKARQ7Z5J8 1434 aa21.72■■□□□ 1.07
COL16A1-213ENST00000482910 NPHP3Q7Z494 1330 aa21.71■■□□□ 1.07
COL16A1-213ENST00000482910 EIF3AQ14152 1382 aaKnown RBP21.71■■□□□ 1.07
COL16A1-213ENST00000482910 TONSLQ96HA7 1378 aa21.7■■□□□ 1.06
COL16A1-213ENST00000482910 PCGF6Q9BYE7 350 aa21.69■■□□□ 1.06
COL16A1-213ENST00000482910 DDX17Q92841 729 aaKnown RBP21.68■■□□□ 1.06
COL16A1-213ENST00000482910 RGPD8O14715 1765 aaPredicted RBP21.68■■□□□ 1.06
COL16A1-213ENST00000482910 MINK1Q8N4C8 1332 aaPredicted RBP21.67■■□□□ 1.06
COL16A1-213ENST00000482910 CLSPNQ9HAW4 1339 aa21.67■■□□□ 1.06
COL16A1-213ENST00000482910 NUTM2FA1L443 756 aa21.67■■□□□ 1.06
COL16A1-213ENST00000482910 USP32Q8NFA0 1604 aa21.66■■□□□ 1.06
COL16A1-213ENST00000482910 TULP4Q9NRJ4 1543 aa21.66■■□□□ 1.06
COL16A1-213ENST00000482910 WASLO00401 505 aaPredicted RBP21.66■■□□□ 1.06
COL16A1-213ENST00000482910 PXDNQ92626 1479 aa21.65■■□□□ 1.06
COL16A1-213ENST00000482910 PNPLA6Q8IY17 1366 aa21.65■■□□□ 1.06
COL16A1-213ENST00000482910 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
COL16A1-213ENST00000482910 GPRASP1Q5JY77 1395 aa21.64■■□□□ 1.06
COL16A1-213ENST00000482910 FOXO3O43524 673 aa21.64■■□□□ 1.05
COL16A1-213ENST00000482910 HIRIP3Q9BW71 556 aaPredicted RBP21.64■■□□□ 1.05
COL16A1-213ENST00000482910 ROCK2O75116 1388 aaKnown RBP21.63■■□□□ 1.05
COL16A1-213ENST00000482910 NBPF8Q3BBV2 869 aa21.63■■□□□ 1.05
COL16A1-213ENST00000482910 PHF8Q9UPP1 1060 aa21.63■■□□□ 1.05
COL16A1-213ENST00000482910 CENPJQ9HC77 1338 aaPredicted RBP21.62■■□□□ 1.05
COL16A1-213ENST00000482910 LRP6O75581 1613 aa21.62■■□□□ 1.05
COL16A1-213ENST00000482910 RALGAPBQ86X10 1494 aa21.6■■□□□ 1.05
COL16A1-213ENST00000482910 COL22A1Q8NFW1 1626 aaPredicted RBP21.6■■□□□ 1.05
COL16A1-213ENST00000482910 PRR36Q9H6K5 1346 aa21.59■■□□□ 1.05
COL16A1-213ENST00000482910 ITSN1Q15811 1721 aa21.59■■□□□ 1.05
COL16A1-213ENST00000482910 QRICH2Q9H0J4 1663 aa21.59■■□□□ 1.05
COL16A1-213ENST00000482910 ATP7BP35670 1465 aa21.58■■□□□ 1.05
COL16A1-213ENST00000482910 CDK19Q9BWU1 502 aa21.56■■□□□ 1.04
COL16A1-213ENST00000482910 RGS17Q9UGC6 210 aaPredicted RBP21.56■■□□□ 1.04
COL16A1-213ENST00000482910 TIMELESSQ9UNS1 1208 aa21.56■■□□□ 1.04
COL16A1-213ENST00000482910 PSME1Q06323 249 aa21.55■■□□□ 1.04
COL16A1-213ENST00000482910 KRT28Q7Z3Y7 464 aa21.55■■□□□ 1.04
COL16A1-213ENST00000482910 SBNO1A3KN83 1393 aa21.55■■□□□ 1.04
COL16A1-213ENST00000482910 SPATA31A3Q5VYP0 1347 aa21.55■■□□□ 1.04
COL16A1-213ENST00000482910 XPCQ01831 940 aaPredicted RBP21.54■■□□□ 1.04
COL16A1-213ENST00000482910 NUDT16Q96DE0 195 aaKnown RBP21.54■■□□□ 1.04
COL16A1-213ENST00000482910 TOPAZ1Q8N9V7 1692 aa21.53■■□□□ 1.04
COL16A1-213ENST00000482910 MEX3CQ5U5Q3 659 aaKnown RBP21.53■■□□□ 1.04
COL16A1-213ENST00000482910 NUTM2BA6NNL0 878 aaPredicted RBP21.52■■□□□ 1.04
COL16A1-213ENST00000482910 NUTM2EB1AL46 878 aaPredicted RBP21.52■■□□□ 1.04
COL16A1-213ENST00000482910 NUTM2AQ8IVF1 878 aaPredicted RBP21.52■■□□□ 1.04
COL16A1-213ENST00000482910 PMFBP1Q8TBY8 1022 aa21.52■■□□□ 1.04
COL16A1-213ENST00000482910 TNS3Q68CZ2 1445 aa21.52■■□□□ 1.04
COL16A1-213ENST00000482910 SBNO2Q9Y2G9 1366 aa21.51■■□□□ 1.03
COL16A1-213ENST00000482910 CARD11Q9BXL7 1154 aa21.51■■□□□ 1.03
COL16A1-213ENST00000482910 CCDC61Q9Y6R9 512 aa21.51■■□□□ 1.03
COL16A1-213ENST00000482910 TRPM3Q9HCF6 1732 aaPredicted RBP21.5■■□□□ 1.03
COL16A1-213ENST00000482910 ARHGEF10O15013 1369 aa21.48■■□□□ 1.03
COL16A1-213ENST00000482910 PLEKHG3A1L390 1219 aa21.48■■□□□ 1.03
COL16A1-213ENST00000482910 EVC2Q86UK5 1308 aa21.48■■□□□ 1.03
COL16A1-213ENST00000482910 POLR3AO14802 1390 aaPredicted RBP21.48■■□□□ 1.03
COL16A1-213ENST00000482910 SRPK2P78362 688 aaKnown RBP21.47■■□□□ 1.03
COL16A1-213ENST00000482910 ZNF772Q68DY9 489 aaPredicted RBP21.47■■□□□ 1.03
COL16A1-213ENST00000482910 NGDNQ8NEJ9 315 aaKnown RBP21.47■■□□□ 1.03
COL16A1-213ENST00000482910 ALS2Q96Q42 1657 aa21.45■■□□□ 1.02
COL16A1-213ENST00000482910 POTEAQ6S8J7 498 aa21.45■■□□□ 1.02
COL16A1-213ENST00000482910 MARF1Q9Y4F3 1742 aaKnown RBP21.45■■□□□ 1.02
COL16A1-213ENST00000482910 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
COL16A1-213ENST00000482910 CABP2Q9NPB3 220 aa21.43■■□□□ 1.02
COL16A1-213ENST00000482910 PPIP5K1Q6PFW1 1433 aa21.43■■□□□ 1.02
COL16A1-213ENST00000482910 ADAMTS2O95450 1211 aa21.42■■□□□ 1.02
COL16A1-213ENST00000482910 ACEP12821 1306 aa21.42■■□□□ 1.02
COL16A1-213ENST00000482910 AFF2P51816 1311 aa21.42■■□□□ 1.02
COL16A1-213ENST00000482910 C8orf37Q96NL8 207 aa21.42■■□□□ 1.02
COL16A1-213ENST00000482910 BRD4O60885 1362 aaPredicted RBP21.4■■□□□ 1.02
COL16A1-213ENST00000482910 ABCA3Q99758 1704 aa21.4■■□□□ 1.02
COL16A1-213ENST00000482910 ATAD2Q6PL18 1390 aa21.39■■□□□ 1.02
COL16A1-213ENST00000482910 FNBP4Q8N3X1 1017 aaPredicted RBP21.39■■□□□ 1.01
COL16A1-213ENST00000482910 NGLY1Q96IV0 654 aa21.39■■□□□ 1.01
COL16A1-213ENST00000482910 SLC24A1O60721 1099 aa21.38■■□□□ 1.01
COL16A1-213ENST00000482910 LMOD2Q6P5Q4 547 aa21.37■■□□□ 1.01
COL16A1-213ENST00000482910 PUS7Q96PZ0 661 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms