RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TMEM132EQ6IEE7 984 aa19.57■□□□□ 0.72
ATG4B-220ENST00000482507 PIK3C2GO75747 1445 aa19.57■□□□□ 0.72
ATG4B-220ENST00000482507 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
ATG4B-220ENST00000482507 TMEM131LA2VDJ0 1609 aa19.56■□□□□ 0.72
ATG4B-220ENST00000482507 A2ML1A8K2U0 1454 aa19.56■□□□□ 0.72
ATG4B-220ENST00000482507 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
ATG4B-220ENST00000482507 KIAA1210Q9ULL0 1709 aa19.54■□□□□ 0.72
ATG4B-220ENST00000482507 CCDC146Q8IYE0 955 aa19.54■□□□□ 0.72
ATG4B-220ENST00000482507 ADAMTSL3P82987 1691 aa19.53■□□□□ 0.72
ATG4B-220ENST00000482507 EIF3AQ14152 1382 aaKnown RBP19.53■□□□□ 0.72
ATG4B-220ENST00000482507 MYO5BQ9ULV0 1848 aa19.53■□□□□ 0.72
ATG4B-220ENST00000482507 KDM2BQ8NHM5 1336 aa19.52■□□□□ 0.72
ATG4B-220ENST00000482507 NEURL4Q96JN8 1562 aa19.52■□□□□ 0.72
ATG4B-220ENST00000482507 KDM5AP29375 1690 aaKnown RBP19.52■□□□□ 0.72
ATG4B-220ENST00000482507 GOLGA2Q08379 1002 aa19.52■□□□□ 0.72
ATG4B-220ENST00000482507 NEXMIFQ5QGS0 1516 aa19.52■□□□□ 0.71
ATG4B-220ENST00000482507 CARD14Q9BXL6 1004 aa19.52■□□□□ 0.71
ATG4B-220ENST00000482507 SPINK5Q9NQ38 1064 aaPredicted RBP19.52■□□□□ 0.71
ATG4B-220ENST00000482507 KDM4FA0A1W2PPD8 638 aa19.51■□□□□ 0.71
ATG4B-220ENST00000482507 C14orf93Q9H972 538 aaKnown RBP19.51■□□□□ 0.71
ATG4B-220ENST00000482507 LTKP29376 864 aa19.51■□□□□ 0.71
ATG4B-220ENST00000482507 SLFN5Q08AF3 891 aa19.51■□□□□ 0.71
ATG4B-220ENST00000482507 RIMS2Q9UQ26 1411 aa19.5■□□□□ 0.71
ATG4B-220ENST00000482507 MYOM2P54296 1465 aa19.5■□□□□ 0.71
ATG4B-220ENST00000482507 TRMT2AQ8IZ69 625 aaKnown RBP19.49■□□□□ 0.71
ATG4B-220ENST00000482507 PTPRMP28827 1452 aa19.49■□□□□ 0.71
ATG4B-220ENST00000482507 APAF1O14727 1248 aa19.48■□□□□ 0.71
ATG4B-220ENST00000482507 TXNDC2Q86VQ3 553 aa19.47■□□□□ 0.71
ATG4B-220ENST00000482507 TRAK1Q9UPV9 953 aa19.47■□□□□ 0.71
ATG4B-220ENST00000482507 NRXN1Q9ULB1 1477 aa19.47■□□□□ 0.71
ATG4B-220ENST00000482507 TMEM2Q9UHN6 1383 aa19.47■□□□□ 0.71
ATG4B-220ENST00000482507 STK26Q9P289 416 aa19.47■□□□□ 0.71
ATG4B-220ENST00000482507 PPLO60437 1756 aa19.47■□□□□ 0.71
ATG4B-220ENST00000482507 IFT172Q9UG01 1749 aa19.46■□□□□ 0.71
ATG4B-220ENST00000482507 NLRP1Q9C000 1473 aa19.46■□□□□ 0.71
ATG4B-220ENST00000482507 DMRT2Q9Y5R5 561 aa19.46■□□□□ 0.71
ATG4B-220ENST00000482507 THEMISQ8N1K5 641 aaPredicted RBP19.45■□□□□ 0.7
ATG4B-220ENST00000482507 ZFYVE9O95405 1425 aa19.44■□□□□ 0.7
ATG4B-220ENST00000482507 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.43■□□□□ 0.7
ATG4B-220ENST00000482507 HDGFP51858 240 aaKnown RBP19.42■□□□□ 0.7
ATG4B-220ENST00000482507 CENPQQ7L2Z9 268 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-220ENST00000482507 SLC26A8Q96RN1 970 aa19.42■□□□□ 0.7
ATG4B-220ENST00000482507 BCAR3O75815 825 aa19.41■□□□□ 0.7
ATG4B-220ENST00000482507 EID1Q9Y6B2 187 aa19.41■□□□□ 0.7
ATG4B-220ENST00000482507 UBR1Q8IWV7 1749 aa19.41■□□□□ 0.7
ATG4B-220ENST00000482507 LAS1LQ9Y4W2 734 aaKnown RBP19.41■□□□□ 0.7
ATG4B-220ENST00000482507 MYO3AQ8NEV4 1616 aa19.4■□□□□ 0.7
ATG4B-220ENST00000482507 SAFB2Q14151 953 aaKnown RBP eCLIP19.4■□□□□ 0.7
ATG4B-220ENST00000482507 NKTRP30414 1462 aaKnown RBP19.4■□□□□ 0.7
ATG4B-220ENST00000482507 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.38■□□□□ 0.69
ATG4B-220ENST00000482507 SBNO2Q9Y2G9 1366 aa19.37■□□□□ 0.69
ATG4B-220ENST00000482507 RTL5Q5HYW3 569 aaPredicted RBP19.37■□□□□ 0.69
ATG4B-220ENST00000482507 CENPJQ9HC77 1338 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-220ENST00000482507 SLC24A1O60721 1099 aa19.36■□□□□ 0.69
ATG4B-220ENST00000482507 METP08581 1390 aa19.36■□□□□ 0.69
ATG4B-220ENST00000482507 E9PSI1 815 aa19.35■□□□□ 0.69
ATG4B-220ENST00000482507 ADGRB1O14514 1584 aa19.35■□□□□ 0.69
ATG4B-220ENST00000482507 CEP170BQ9Y4F5 1589 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-220ENST00000482507 C8orf34Q49A92 452 aa19.35■□□□□ 0.69
ATG4B-220ENST00000482507 POLR3AO14802 1390 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-220ENST00000482507 HSPA2P54652 639 aa19.34■□□□□ 0.69
ATG4B-220ENST00000482507 NSD3Q9BZ95 1437 aa19.34■□□□□ 0.69
ATG4B-220ENST00000482507 SLC12A5Q9H2X9 1139 aa19.34■□□□□ 0.69
ATG4B-220ENST00000482507 SETBP1Q9Y6X0 1596 aa19.34■□□□□ 0.69
ATG4B-220ENST00000482507 ALKQ9UM73 1620 aa19.33■□□□□ 0.69
ATG4B-220ENST00000482507 SHPRHQ149N8 1683 aa19.32■□□□□ 0.68
ATG4B-220ENST00000482507 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-220ENST00000482507 ANKLE2Q86XL3 938 aa19.32■□□□□ 0.68
ATG4B-220ENST00000482507 WWC1Q8IX03 1113 aa19.32■□□□□ 0.68
ATG4B-220ENST00000482507 WAPLQ7Z5K2 1190 aa19.32■□□□□ 0.68
ATG4B-220ENST00000482507 NCKAP5LQ9HCH0 1330 aa19.31■□□□□ 0.68
ATG4B-220ENST00000482507 SETD1BQ9UPS6 1966 aaKnown RBP19.31■□□□□ 0.68
ATG4B-220ENST00000482507 ARHGAP23Q9P227 1491 aa19.3■□□□□ 0.68
ATG4B-220ENST00000482507 NEFMP07197 916 aa19.3■□□□□ 0.68
ATG4B-220ENST00000482507 RGS3P49796 1198 aa19.3■□□□□ 0.68
ATG4B-220ENST00000482507 FAM161AQ3B820 660 aa19.3■□□□□ 0.68
ATG4B-220ENST00000482507 PRAM1Q96QH2 718 aa19.3■□□□□ 0.68
ATG4B-220ENST00000482507 QRICH2Q9H0J4 1663 aa19.3■□□□□ 0.68
ATG4B-220ENST00000482507 IGHDP01880 384 aa19.3■□□□□ 0.68
ATG4B-220ENST00000482507 SLIT1O75093 1534 aa19.29■□□□□ 0.68
ATG4B-220ENST00000482507 YTHDC2Q9H6S0 1430 aaKnown RBP19.29■□□□□ 0.68
ATG4B-220ENST00000482507 PLEKHG1Q9ULL1 1385 aa19.29■□□□□ 0.68
ATG4B-220ENST00000482507 SLC4A3P48751 1232 aa19.29■□□□□ 0.68
ATG4B-220ENST00000482507 MORC1Q86VD1 984 aa19.29■□□□□ 0.68
ATG4B-220ENST00000482507 ADAMTS13Q76LX8 1427 aa19.29■□□□□ 0.68
ATG4B-220ENST00000482507 DDRGK1Q96HY6 314 aa19.28■□□□□ 0.68
ATG4B-220ENST00000482507 POGKQ9P215 609 aa19.28■□□□□ 0.68
ATG4B-220ENST00000482507 RRP7AQ9Y3A4 280 aaKnown RBP19.28■□□□□ 0.68
ATG4B-220ENST00000482507 NGEFQ8N5V2 710 aa19.27■□□□□ 0.68
ATG4B-220ENST00000482507 NRXN3Q9Y4C0 1643 aa19.27■□□□□ 0.67
ATG4B-220ENST00000482507 NEUROD2Q15784 382 aa19.26■□□□□ 0.67
ATG4B-220ENST00000482507 PANK1Q8TE04 598 aa19.26■□□□□ 0.67
ATG4B-220ENST00000482507 MINK1Q8N4C8 1332 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-220ENST00000482507 IQSEC2Q5JU85 1478 aa19.25■□□□□ 0.67
ATG4B-220ENST00000482507 PDE3AQ14432 1141 aa19.23■□□□□ 0.67
ATG4B-220ENST00000482507 TCP11L2Q8N4U5 519 aa19.23■□□□□ 0.67
ATG4B-220ENST00000482507 COG6Q9Y2V7 657 aa19.23■□□□□ 0.67
ATG4B-220ENST00000482507 PPM1GO15355 546 aaPredicted RBP19.23■□□□□ 0.67
ATG4B-220ENST00000482507 RUNDC1Q96C34 613 aa19.23■□□□□ 0.67
ATG4B-220ENST00000482507 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms