RNA–Protein interactions for RNA: ENST00000482420.1

TMEM139-208, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-208ENST00000482420 QTRT2Q9H974 415 aaKnown RBP28.41■■■□□ 2.14
TMEM139-208ENST00000482420 NGLY1Q96IV0 654 aa28.4■■■□□ 2.14
TMEM139-208ENST00000482420 CDC42BPGQ6DT37 1551 aa28.4■■■□□ 2.14
TMEM139-208ENST00000482420 ESCO1Q5FWF5 840 aa28.39■■■□□ 2.14
TMEM139-208ENST00000482420 IFT172Q9UG01 1749 aa28.39■■■□□ 2.14
TMEM139-208ENST00000482420 ANKRD30BQ9BXX2 1392 aa28.37■■■□□ 2.13
TMEM139-208ENST00000482420 RGS12O14924 1447 aa28.37■■■□□ 2.13
TMEM139-208ENST00000482420 WAPLQ7Z5K2 1190 aa28.37■■■□□ 2.13
TMEM139-208ENST00000482420 NUTM2FA1L443 756 aa28.36■■■□□ 2.13
TMEM139-208ENST00000482420 TMEM132EQ6IEE7 984 aa28.36■■■□□ 2.13
TMEM139-208ENST00000482420 RBM6P78332 1123 aaKnown RBP28.35■■■□□ 2.13
TMEM139-208ENST00000482420 XPCQ01831 940 aaPredicted RBP28.34■■■□□ 2.13
TMEM139-208ENST00000482420 LRPPRCP42704 1394 aaKnown RBP28.34■■■□□ 2.13
TMEM139-208ENST00000482420 PLEKHH1Q9ULM0 1364 aa28.34■■■□□ 2.13
TMEM139-208ENST00000482420 TECPR2O15040 1411 aa28.34■■■□□ 2.13
TMEM139-208ENST00000482420 PIK3C2GO75747 1445 aa28.34■■■□□ 2.13
TMEM139-208ENST00000482420 NPHP3Q7Z494 1330 aa28.33■■■□□ 2.13
TMEM139-208ENST00000482420 FOXO3O43524 673 aa28.31■■■□□ 2.12
TMEM139-208ENST00000482420 USP21Q9UK80 565 aa28.31■■■□□ 2.12
TMEM139-208ENST00000482420 COL22A1Q8NFW1 1626 aaPredicted RBP28.31■■■□□ 2.12
TMEM139-208ENST00000482420 PXDNQ92626 1479 aa28.3■■■□□ 2.12
TMEM139-208ENST00000482420 KNDC1Q76NI1 1749 aa28.29■■■□□ 2.12
TMEM139-208ENST00000482420 ABCC11Q96J66 1382 aa28.28■■■□□ 2.12
TMEM139-208ENST00000482420 YTHDC2Q9H6S0 1430 aaKnown RBP28.27■■■□□ 2.12
TMEM139-208ENST00000482420 MYOM2P54296 1465 aa28.26■■■□□ 2.11
TMEM139-208ENST00000482420 TRPC5Q9UL62 973 aaPredicted RBP28.24■■■□□ 2.11
TMEM139-208ENST00000482420 FMN2Q9NZ56 1722 aa28.23■■■□□ 2.11
TMEM139-208ENST00000482420 FNBP4Q8N3X1 1017 aaPredicted RBP28.22■■■□□ 2.11
TMEM139-208ENST00000482420 CFAP70Q5T0N1 1121 aa28.19■■■□□ 2.1
TMEM139-208ENST00000482420 C14orf93Q9H972 538 aaKnown RBP28.19■■■□□ 2.1
TMEM139-208ENST00000482420 ATRNO75882 1429 aa28.18■■■□□ 2.1
TMEM139-208ENST00000482420 NRXN1Q9ULB1 1477 aa28.17■■■□□ 2.1
TMEM139-208ENST00000482420 MARF1Q9Y4F3 1742 aaKnown RBP28.17■■■□□ 2.1
TMEM139-208ENST00000482420 KIF1AQ12756 1690 aa28.16■■■□□ 2.1
TMEM139-208ENST00000482420 RAB3GAP2Q9H2M9 1393 aa28.16■■■□□ 2.1
TMEM139-208ENST00000482420 SAFB2Q14151 953 aaKnown RBP eCLIP28.16■■■□□ 2.1
TMEM139-208ENST00000482420 ACIN1Q9UKV3 1341 aaKnown RBP28.15■■■□□ 2.1
TMEM139-208ENST00000482420 BCL9LQ86UU0 1499 aa28.15■■■□□ 2.1
TMEM139-208ENST00000482420 DHX57Q6P158 1386 aaKnown RBP28.14■■■□□ 2.1
TMEM139-208ENST00000482420 ATAD2Q6PL18 1390 aa28.14■■■□□ 2.1
TMEM139-208ENST00000482420 RGPD8O14715 1765 aaPredicted RBP28.12■■■□□ 2.09
TMEM139-208ENST00000482420 SIRT1Q96EB6 747 aa28.12■■■□□ 2.09
TMEM139-208ENST00000482420 PRAM1Q96QH2 718 aa28.12■■■□□ 2.09
TMEM139-208ENST00000482420 SPATA31A3Q5VYP0 1347 aa28.12■■■□□ 2.09
TMEM139-208ENST00000482420 KRT28Q7Z3Y7 464 aa28.11■■■□□ 2.09
TMEM139-208ENST00000482420 PLEKHG5O94827 1062 aa28.1■■■□□ 2.09
TMEM139-208ENST00000482420 PHF8Q9UPP1 1060 aa28.09■■■□□ 2.09
TMEM139-208ENST00000482420 GJD4Q96KN9 370 aaPredicted RBP28.06■■■□□ 2.08
TMEM139-208ENST00000482420 POGKQ9P215 609 aa28.06■■■□□ 2.08
TMEM139-208ENST00000482420 HAP1P54257 671 aaPredicted RBP28.05■■■□□ 2.08
TMEM139-208ENST00000482420 TNS3Q68CZ2 1445 aa28.05■■■□□ 2.08
TMEM139-208ENST00000482420 USP32Q8NFA0 1604 aa28.05■■■□□ 2.08
TMEM139-208ENST00000482420 PSME1Q06323 249 aa28.03■■■□□ 2.08
TMEM139-208ENST00000482420 LMOD2Q6P5Q4 547 aa28.03■■■□□ 2.08
TMEM139-208ENST00000482420 CABLES1Q8TDN4 633 aa28.03■■■□□ 2.08
TMEM139-208ENST00000482420 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.03■■■□□ 2.08
TMEM139-208ENST00000482420 DLC1Q96QB1 1528 aa28.02■■■□□ 2.08
TMEM139-208ENST00000482420 UNC5CLQ8IV45 518 aa28.02■■■□□ 2.08
TMEM139-208ENST00000482420 KDM2AQ9Y2K7 1162 aa28.02■■■□□ 2.08
TMEM139-208ENST00000482420 SLIT2O94813 1529 aa28.02■■■□□ 2.08
TMEM139-208ENST00000482420 PMFBP1Q8TBY8 1022 aa28.01■■■□□ 2.07
TMEM139-208ENST00000482420 HIRIP3Q9BW71 556 aaPredicted RBP28.01■■■□□ 2.07
TMEM139-208ENST00000482420 TRAK1Q9UPV9 953 aa28.01■■■□□ 2.07
TMEM139-208ENST00000482420 ADGRB1O14514 1584 aa28.01■■■□□ 2.07
TMEM139-208ENST00000482420 RALGAPBQ86X10 1494 aa28■■■□□ 2.07
TMEM139-208ENST00000482420 EP400Q96L91 3159 aa27.99■■■□□ 2.07
TMEM139-208ENST00000482420 GLI3P10071 1580 aa27.99■■■□□ 2.07
TMEM139-208ENST00000482420 DCAF11Q8TEB1 546 aa27.98■■■□□ 2.07
TMEM139-208ENST00000482420 ADGRB2O60241 1585 aa27.97■■■□□ 2.07
TMEM139-208ENST00000482420 SBNO1A3KN83 1393 aa27.97■■■□□ 2.07
TMEM139-208ENST00000482420 ANKARQ7Z5J8 1434 aa27.96■■■□□ 2.07
TMEM139-208ENST00000482420 ABCA3Q99758 1704 aa27.95■■■□□ 2.07
TMEM139-208ENST00000482420 MINK1Q8N4C8 1332 aaPredicted RBP27.95■■■□□ 2.07
TMEM139-208ENST00000482420 ARHGEF10O15013 1369 aa27.94■■■□□ 2.06
TMEM139-208ENST00000482420 PLCH1Q4KWH8 1693 aa27.94■■■□□ 2.06
TMEM139-208ENST00000482420 CCDC9Q9Y3X0 531 aaKnown RBP27.91■■■□□ 2.06
TMEM139-208ENST00000482420 PRR36Q9H6K5 1346 aa27.89■■■□□ 2.05
TMEM139-208ENST00000482420 TRPM3Q9HCF6 1732 aaPredicted RBP27.88■■■□□ 2.05
TMEM139-208ENST00000482420 TULP4Q9NRJ4 1543 aa27.87■■■□□ 2.05
TMEM139-208ENST00000482420 NWD2Q9ULI1 1742 aa27.87■■■□□ 2.05
TMEM139-208ENST00000482420 VPS72Q15906 364 aa27.87■■■□□ 2.05
TMEM139-208ENST00000482420 CCDC125Q86Z20 511 aa27.87■■■□□ 2.05
TMEM139-208ENST00000482420 EIF3AQ14152 1382 aaKnown RBP27.86■■■□□ 2.05
TMEM139-208ENST00000482420 BRWD3Q6RI45 1802 aa27.86■■■□□ 2.05
TMEM139-208ENST00000482420 SEPT12Q8IYM1 358 aa27.86■■■□□ 2.05
TMEM139-208ENST00000482420 GPRASP1Q5JY77 1395 aa27.86■■■□□ 2.05
TMEM139-208ENST00000482420 FAM83GA6ND36 823 aa27.85■■■□□ 2.05
TMEM139-208ENST00000482420 WASLO00401 505 aaPredicted RBP27.85■■■□□ 2.05
TMEM139-208ENST00000482420 ZRANB1Q9UGI0 708 aa27.85■■■□□ 2.05
TMEM139-208ENST00000482420 ALS2Q96Q42 1657 aa27.82■■■□□ 2.04
TMEM139-208ENST00000482420 ARHGEF28Q8N1W1 1705 aaKnown RBP27.82■■■□□ 2.04
TMEM139-208ENST00000482420 SRCAPQ6ZRS2 3230 aa27.82■■■□□ 2.04
TMEM139-208ENST00000482420 NGDNQ8NEJ9 315 aaKnown RBP27.81■■■□□ 2.04
TMEM139-208ENST00000482420 BLMP54132 1417 aaPredicted RBP27.81■■■□□ 2.04
TMEM139-208ENST00000482420 A0A0G2JS52 829 aa27.8■■■□□ 2.04
TMEM139-208ENST00000482420 PAK3O75914 559 aaPredicted RBP27.8■■■□□ 2.04
TMEM139-208ENST00000482420 MYT1Q01538 1121 aa27.8■■■□□ 2.04
TMEM139-208ENST00000482420 STAC3Q96MF2 364 aa27.79■■■□□ 2.04
TMEM139-208ENST00000482420 BTG4Q9NY30 223 aa27.79■■■□□ 2.04
TMEM139-208ENST00000482420 NRAPQ86VF7 1730 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms