RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 MYOM2P54296 1465 aa13.68□□□□□ -0.22
CLIP4-210ENST00000481628 PXDNQ92626 1479 aa13.68□□□□□ -0.22
CLIP4-210ENST00000481628 ADGRF5Q8IZF2 1346 aa13.68□□□□□ -0.22
CLIP4-210ENST00000481628 RGS12O14924 1447 aa13.68□□□□□ -0.22
CLIP4-210ENST00000481628 ORAI2Q96SN7 254 aa13.68□□□□□ -0.22
CLIP4-210ENST00000481628 ABCC11Q96J66 1382 aa13.68□□□□□ -0.22
CLIP4-210ENST00000481628 NRXN1Q9ULB1 1477 aa13.67□□□□□ -0.22
CLIP4-210ENST00000481628 ACIN1Q9UKV3 1341 aaKnown RBP13.66□□□□□ -0.22
CLIP4-210ENST00000481628 FOXD1Q16676 465 aa13.66□□□□□ -0.22
CLIP4-210ENST00000481628 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
CLIP4-210ENST00000481628 RBM6P78332 1123 aaKnown RBP13.65□□□□□ -0.22
CLIP4-210ENST00000481628 C8orf37Q96NL8 207 aa13.65□□□□□ -0.22
CLIP4-210ENST00000481628 MPHOSPH9Q99550 1183 aa13.65□□□□□ -0.22
CLIP4-210ENST00000481628 FMN2Q9NZ56 1722 aa13.64□□□□□ -0.23
CLIP4-210ENST00000481628 KIF1AQ12756 1690 aa13.63□□□□□ -0.23
CLIP4-210ENST00000481628 FNBP4Q8N3X1 1017 aaPredicted RBP13.63□□□□□ -0.23
CLIP4-210ENST00000481628 ATRNO75882 1429 aa13.63□□□□□ -0.23
CLIP4-210ENST00000481628 YTHDC2Q9H6S0 1430 aaKnown RBP13.63□□□□□ -0.23
CLIP4-210ENST00000481628 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
CLIP4-210ENST00000481628 SIRT1Q96EB6 747 aa13.62□□□□□ -0.23
CLIP4-210ENST00000481628 QTRT2Q9H974 415 aaKnown RBP13.62□□□□□ -0.23
CLIP4-210ENST00000481628 PLEKHH1Q9ULM0 1364 aa13.61□□□□□ -0.23
CLIP4-210ENST00000481628 ADAMTS2O95450 1211 aa13.6□□□□□ -0.23
CLIP4-210ENST00000481628 RGL3Q3MIN7 710 aa13.6□□□□□ -0.23
CLIP4-210ENST00000481628 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
CLIP4-210ENST00000481628 NGLY1Q96IV0 654 aa13.6□□□□□ -0.23
CLIP4-210ENST00000481628 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.59□□□□□ -0.23
CLIP4-210ENST00000481628 WAPLQ7Z5K2 1190 aa13.59□□□□□ -0.23
CLIP4-210ENST00000481628 C14orf93Q9H972 538 aaKnown RBP13.59□□□□□ -0.23
CLIP4-210ENST00000481628 BCL9LQ86UU0 1499 aa13.59□□□□□ -0.23
CLIP4-210ENST00000481628 DLC1Q96QB1 1528 aa13.59□□□□□ -0.23
CLIP4-210ENST00000481628 USP21Q9UK80 565 aa13.58□□□□□ -0.24
CLIP4-210ENST00000481628 TRPC5Q9UL62 973 aaPredicted RBP13.58□□□□□ -0.24
CLIP4-210ENST00000481628 ADGRB2O60241 1585 aa13.58□□□□□ -0.24
CLIP4-210ENST00000481628 FOXO3O43524 673 aa13.57□□□□□ -0.24
CLIP4-210ENST00000481628 TMEM132EQ6IEE7 984 aa13.57□□□□□ -0.24
CLIP4-210ENST00000481628 STK26Q9P289 416 aa13.57□□□□□ -0.24
CLIP4-210ENST00000481628 ADGRB1O14514 1584 aa13.56□□□□□ -0.24
CLIP4-210ENST00000481628 SPATA31A3Q5VYP0 1347 aa13.56□□□□□ -0.24
CLIP4-210ENST00000481628 ATAD2Q6PL18 1390 aa13.56□□□□□ -0.24
CLIP4-210ENST00000481628 SLIT2O94813 1529 aa13.55□□□□□ -0.24
CLIP4-210ENST00000481628 USP32Q8NFA0 1604 aa13.55□□□□□ -0.24
CLIP4-210ENST00000481628 DHX57Q6P158 1386 aaKnown RBP13.55□□□□□ -0.24
CLIP4-210ENST00000481628 RAB3GAP2Q9H2M9 1393 aa13.54□□□□□ -0.24
CLIP4-210ENST00000481628 TNS3Q68CZ2 1445 aa13.54□□□□□ -0.24
CLIP4-210ENST00000481628 ANKARQ7Z5J8 1434 aa13.54□□□□□ -0.24
CLIP4-210ENST00000481628 XPCQ01831 940 aaPredicted RBP13.53□□□□□ -0.24
CLIP4-210ENST00000481628 ABCA3Q99758 1704 aa13.53□□□□□ -0.24
CLIP4-210ENST00000481628 CFAP70Q5T0N1 1121 aa13.52□□□□□ -0.25
CLIP4-210ENST00000481628 SBNO1A3KN83 1393 aa13.52□□□□□ -0.25
CLIP4-210ENST00000481628 GLI3P10071 1580 aa13.52□□□□□ -0.25
CLIP4-210ENST00000481628 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
CLIP4-210ENST00000481628 NUTM2FA1L443 756 aa13.51□□□□□ -0.25
CLIP4-210ENST00000481628 PHF8Q9UPP1 1060 aa13.5□□□□□ -0.25
CLIP4-210ENST00000481628 NWD2Q9ULI1 1742 aa13.5□□□□□ -0.25
CLIP4-210ENST00000481628 RALGAPBQ86X10 1494 aa13.49□□□□□ -0.25
CLIP4-210ENST00000481628 KRT28Q7Z3Y7 464 aa13.49□□□□□ -0.25
CLIP4-210ENST00000481628 GJD4Q96KN9 370 aaPredicted RBP13.49□□□□□ -0.25
CLIP4-210ENST00000481628 PRAM1Q96QH2 718 aa13.49□□□□□ -0.25
CLIP4-210ENST00000481628 TRPM3Q9HCF6 1732 aaPredicted RBP13.49□□□□□ -0.25
CLIP4-210ENST00000481628 ARHGEF10O15013 1369 aa13.48□□□□□ -0.25
CLIP4-210ENST00000481628 PLCH1Q4KWH8 1693 aa13.48□□□□□ -0.25
CLIP4-210ENST00000481628 UNC5CLQ8IV45 518 aa13.48□□□□□ -0.25
CLIP4-210ENST00000481628 TULP4Q9NRJ4 1543 aa13.48□□□□□ -0.25
CLIP4-210ENST00000481628 PSME1Q06323 249 aa13.47□□□□□ -0.25
CLIP4-210ENST00000481628 STAC3Q96MF2 364 aa13.47□□□□□ -0.25
CLIP4-210ENST00000481628 EP400Q96L91 3159 aa13.47□□□□□ -0.25
CLIP4-210ENST00000481628 ALS2Q96Q42 1657 aa13.47□□□□□ -0.25
CLIP4-210ENST00000481628 EIF3AQ14152 1382 aaKnown RBP13.46□□□□□ -0.25
CLIP4-210ENST00000481628 HRCP23327 699 aa13.46□□□□□ -0.25
CLIP4-210ENST00000481628 CCDC125Q86Z20 511 aa13.46□□□□□ -0.25
CLIP4-210ENST00000481628 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
CLIP4-210ENST00000481628 ARHGEF28Q8N1W1 1705 aaKnown RBP13.44□□□□□ -0.26
CLIP4-210ENST00000481628 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
CLIP4-210ENST00000481628 VPS72Q15906 364 aa13.43□□□□□ -0.26
CLIP4-210ENST00000481628 POGKQ9P215 609 aa13.43□□□□□ -0.26
CLIP4-210ENST00000481628 PRR36Q9H6K5 1346 aa13.42□□□□□ -0.26
CLIP4-210ENST00000481628 BLMP54132 1417 aaPredicted RBP13.42□□□□□ -0.26
CLIP4-210ENST00000481628 BRWD3Q6RI45 1802 aa13.42□□□□□ -0.26
CLIP4-210ENST00000481628 ONECUT3O60422 494 aaPredicted RBP13.42□□□□□ -0.26
CLIP4-210ENST00000481628 SAFB2Q14151 953 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLIP4-210ENST00000481628 ATP7BP35670 1465 aa13.42□□□□□ -0.26
CLIP4-210ENST00000481628 COL14A1Q05707 1796 aaKnown RBP13.4□□□□□ -0.26
CLIP4-210ENST00000481628 ITSN1Q15811 1721 aa13.4□□□□□ -0.26
CLIP4-210ENST00000481628 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
CLIP4-210ENST00000481628 CABLES1Q8TDN4 633 aa13.4□□□□□ -0.26
CLIP4-210ENST00000481628 TRAK1Q9UPV9 953 aa13.4□□□□□ -0.26
CLIP4-210ENST00000481628 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
CLIP4-210ENST00000481628 PMFBP1Q8TBY8 1022 aa13.39□□□□□ -0.27
CLIP4-210ENST00000481628 DCAF11Q8TEB1 546 aa13.39□□□□□ -0.27
CLIP4-210ENST00000481628 GPRASP1Q5JY77 1395 aa13.39□□□□□ -0.27
CLIP4-210ENST00000481628 TOPAZ1Q8N9V7 1692 aa13.38□□□□□ -0.27
CLIP4-210ENST00000481628 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
CLIP4-210ENST00000481628 MINK1Q8N4C8 1332 aaPredicted RBP13.38□□□□□ -0.27
CLIP4-210ENST00000481628 FAM83GA6ND36 823 aa13.37□□□□□ -0.27
CLIP4-210ENST00000481628 SEPT12Q8IYM1 358 aa13.37□□□□□ -0.27
CLIP4-210ENST00000481628 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
CLIP4-210ENST00000481628 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
CLIP4-210ENST00000481628 KDM2AQ9Y2K7 1162 aa13.36□□□□□ -0.27
CLIP4-210ENST00000481628 THSD7AQ9UPZ6 1657 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms