RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 DCAF11Q8TEB1 546 aa15.41■□□□□ 0.06
SSBP1-210ENST00000481508 NALCNQ8IZF0 1738 aa15.4■□□□□ 0.06
SSBP1-210ENST00000481508 NEUROD1Q13562 356 aa15.4■□□□□ 0.06
SSBP1-210ENST00000481508 PROSER2Q86WR7 435 aaPredicted RBP15.4■□□□□ 0.06
SSBP1-210ENST00000481508 RGS12O14924 1447 aa15.4■□□□□ 0.06
SSBP1-210ENST00000481508 CFAP70Q5T0N1 1121 aa15.39■□□□□ 0.05
SSBP1-210ENST00000481508 ADGRB1O14514 1584 aa15.39■□□□□ 0.05
SSBP1-210ENST00000481508 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.39■□□□□ 0.05
SSBP1-210ENST00000481508 MEX3CQ5U5Q3 659 aaKnown RBP15.38■□□□□ 0.05
SSBP1-210ENST00000481508 TMEM132EQ6IEE7 984 aa15.38■□□□□ 0.05
SSBP1-210ENST00000481508 ROBO2Q9HCK4 1378 aa15.37■□□□□ 0.05
SSBP1-210ENST00000481508 PRAG1Q86YV5 1406 aa15.37■□□□□ 0.05
SSBP1-210ENST00000481508 C14orf93Q9H972 538 aaKnown RBP15.37■□□□□ 0.05
SSBP1-210ENST00000481508 CDK12Q9NYV4 1490 aaPredicted RBP15.37■□□□□ 0.05
SSBP1-210ENST00000481508 AHDC1Q5TGY3 1603 aaPredicted RBP15.36■□□□□ 0.05
SSBP1-210ENST00000481508 PTCH1Q13635 1447 aa15.36■□□□□ 0.05
SSBP1-210ENST00000481508 L3MBTL2Q969R5 705 aa15.36■□□□□ 0.05
SSBP1-210ENST00000481508 KIAA1210Q9ULL0 1709 aa15.36■□□□□ 0.05
SSBP1-210ENST00000481508 LRPPRCP42704 1394 aaKnown RBP15.35■□□□□ 0.05
SSBP1-210ENST00000481508 YTHDC2Q9H6S0 1430 aaKnown RBP15.34■□□□□ 0.05
SSBP1-210ENST00000481508 ZNF772Q68DY9 489 aaPredicted RBP15.34■□□□□ 0.05
SSBP1-210ENST00000481508 TECPR2O15040 1411 aa15.34■□□□□ 0.05
SSBP1-210ENST00000481508 TRPM1Q7Z4N2 1603 aa15.33■□□□□ 0.04
SSBP1-210ENST00000481508 RXRBP28702 533 aa15.33■□□□□ 0.04
SSBP1-210ENST00000481508 STK26Q9P289 416 aa15.33■□□□□ 0.04
SSBP1-210ENST00000481508 PLEKHH1Q9ULM0 1364 aa15.33■□□□□ 0.04
SSBP1-210ENST00000481508 ARHGEF28Q8N1W1 1705 aaKnown RBP15.32■□□□□ 0.04
SSBP1-210ENST00000481508 SAMD1Q6SPF0 538 aaPredicted RBP15.32■□□□□ 0.04
SSBP1-210ENST00000481508 MSH6P52701 1360 aa15.32■□□□□ 0.04
SSBP1-210ENST00000481508 NCOA3Q9Y6Q9 1424 aa15.31■□□□□ 0.04
SSBP1-210ENST00000481508 SPATA31A6Q5VVP1 1343 aa15.3■□□□□ 0.04
SSBP1-210ENST00000481508 ABCC11Q96J66 1382 aa15.3■□□□□ 0.04
SSBP1-210ENST00000481508 ADGRL3Q9HAR2 1447 aa15.3■□□□□ 0.04
SSBP1-210ENST00000481508 WAPLQ7Z5K2 1190 aa15.29■□□□□ 0.04
SSBP1-210ENST00000481508 SLAIN2Q9P270 581 aa15.29■□□□□ 0.04
SSBP1-210ENST00000481508 DLC1Q96QB1 1528 aa15.28■□□□□ 0.04
SSBP1-210ENST00000481508 NBPF1Q3BBV0 1214 aa15.28■□□□□ 0.04
SSBP1-210ENST00000481508 STAC3Q96MF2 364 aa15.28■□□□□ 0.04
SSBP1-210ENST00000481508 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
SSBP1-210ENST00000481508 AFF2P51816 1311 aa15.27■□□□□ 0.04
SSBP1-210ENST00000481508 NUTM2BA6NNL0 878 aaPredicted RBP15.27■□□□□ 0.04
SSBP1-210ENST00000481508 NUTM2EB1AL46 878 aaPredicted RBP15.27■□□□□ 0.04
SSBP1-210ENST00000481508 NBPF8Q3BBV2 869 aa15.27■□□□□ 0.04
SSBP1-210ENST00000481508 C14orf37Q86TY3 774 aa15.27■□□□□ 0.04
SSBP1-210ENST00000481508 NUTM2AQ8IVF1 878 aaPredicted RBP15.27■□□□□ 0.04
SSBP1-210ENST00000481508 TONSLQ96HA7 1378 aa15.26■□□□□ 0.03
SSBP1-210ENST00000481508 NHSL1Q5SYE7 1610 aa15.26■□□□□ 0.03
SSBP1-210ENST00000481508 CDC42BPGQ6DT37 1551 aa15.26■□□□□ 0.03
SSBP1-210ENST00000481508 C19orf44Q9H6X5 657 aa15.25■□□□□ 0.03
SSBP1-210ENST00000481508 RGPD8O14715 1765 aaPredicted RBP15.25■□□□□ 0.03
SSBP1-210ENST00000481508 FMN2Q9NZ56 1722 aa15.25■□□□□ 0.03
SSBP1-210ENST00000481508 DCCP43146 1447 aa15.25■□□□□ 0.03
SSBP1-210ENST00000481508 MST1RQ04912 1400 aa15.25■□□□□ 0.03
SSBP1-210ENST00000481508 TRAK1Q9UPV9 953 aa15.24■□□□□ 0.03
SSBP1-210ENST00000481508 PRAM1Q96QH2 718 aa15.23■□□□□ 0.03
SSBP1-210ENST00000481508 LRP5O75197 1615 aa15.22■□□□□ 0.03
SSBP1-210ENST00000481508 SAFB2Q14151 953 aaKnown RBP eCLIP15.22■□□□□ 0.03
SSBP1-210ENST00000481508 CCER1Q8TC90 406 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-210ENST00000481508 ADGRB2O60241 1585 aa15.22■□□□□ 0.03
SSBP1-210ENST00000481508 SIRT1Q96EB6 747 aa15.21■□□□□ 0.03
SSBP1-210ENST00000481508 RALGAPBQ86X10 1494 aa15.2■□□□□ 0.02
SSBP1-210ENST00000481508 QRICH2Q9H0J4 1663 aa15.2■□□□□ 0.02
SSBP1-210ENST00000481508 MYCNP04198 464 aaPredicted RBP15.2■□□□□ 0.02
SSBP1-210ENST00000481508 ATF3P18847 181 aa15.2■□□□□ 0.02
SSBP1-210ENST00000481508 CADPS2Q86UW7 1296 aa15.2■□□□□ 0.02
SSBP1-210ENST00000481508 USP32Q8NFA0 1604 aa15.2■□□□□ 0.02
SSBP1-210ENST00000481508 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
SSBP1-210ENST00000481508 C1orf167Q5SNV9 1468 aa15.19■□□□□ 0.02
SSBP1-210ENST00000481508 ZRANB1Q9UGI0 708 aa15.18■□□□□ 0.02
SSBP1-210ENST00000481508 ROCK2O75116 1388 aaKnown RBP15.17■□□□□ 0.02
SSBP1-210ENST00000481508 GPRASP1Q5JY77 1395 aa15.17■□□□□ 0.02
SSBP1-210ENST00000481508 ATAD2Q6PL18 1390 aa15.17■□□□□ 0.02
SSBP1-210ENST00000481508 MINK1Q8N4C8 1332 aaPredicted RBP15.17■□□□□ 0.02
SSBP1-210ENST00000481508 BRWD3Q6RI45 1802 aa15.16■□□□□ 0.02
SSBP1-210ENST00000481508 BRINP3Q76B58 766 aa15.16■□□□□ 0.02
SSBP1-210ENST00000481508 C8orf37Q96NL8 207 aa15.16■□□□□ 0.02
SSBP1-210ENST00000481508 POGKQ9P215 609 aa15.16■□□□□ 0.02
SSBP1-210ENST00000481508 NUTM2FA1L443 756 aa15.15■□□□□ 0.02
SSBP1-210ENST00000481508 HIRIP3Q9BW71 556 aaPredicted RBP15.15■□□□□ 0.02
SSBP1-210ENST00000481508 RBM6P78332 1123 aaKnown RBP15.14■□□□□ 0.01
SSBP1-210ENST00000481508 DDX17Q92841 729 aaKnown RBP15.14■□□□□ 0.01
SSBP1-210ENST00000481508 ORAI2Q96SN7 254 aa15.14■□□□□ 0.01
SSBP1-210ENST00000481508 QTRT2Q9H974 415 aaKnown RBP15.14■□□□□ 0.01
SSBP1-210ENST00000481508 MARF1Q9Y4F3 1742 aaKnown RBP15.12■□□□□ 0.01
SSBP1-210ENST00000481508 TOPAZ1Q8N9V7 1692 aa15.12■□□□□ 0.01
SSBP1-210ENST00000481508 TULP4Q9NRJ4 1543 aa15.12■□□□□ 0.01
SSBP1-210ENST00000481508 PRR36Q9H6K5 1346 aa15.11■□□□□ 0.01
SSBP1-210ENST00000481508 KIF1AQ12756 1690 aa15.1■□□□□ 0.01
SSBP1-210ENST00000481508 CENPJQ9HC77 1338 aaPredicted RBP15.1■□□□□ 0.01
SSBP1-210ENST00000481508 PNPLA6Q8IY17 1366 aa15.1■□□□□ 0.01
SSBP1-210ENST00000481508 CARD11Q9BXL7 1154 aa15.09■□□□□ 0.01
SSBP1-210ENST00000481508 ITSN1Q15811 1721 aa15.09■□□□□ 0.01
SSBP1-210ENST00000481508 ATP7BP35670 1465 aa15.08■□□□□ 0.01
SSBP1-210ENST00000481508 WASLO00401 505 aaPredicted RBP15.08■□□□□ 0
SSBP1-210ENST00000481508 ANKARQ7Z5J8 1434 aa15.08■□□□□ 0
SSBP1-210ENST00000481508 ABCB7O75027 752 aa15.07■□□□□ 0
SSBP1-210ENST00000481508 ESCO1Q5FWF5 840 aa15.07■□□□□ 0
SSBP1-210ENST00000481508 TIMELESSQ9UNS1 1208 aa15.07■□□□□ 0
SSBP1-210ENST00000481508 PXDNQ92626 1479 aa15.07■□□□□ 0
SSBP1-210ENST00000481508 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms