RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 NUTM2FA1L443 756 aa16.64■□□□□ 0.25
RAPGEF1-207ENST00000481260 KNDC1Q76NI1 1749 aa16.63■□□□□ 0.25
RAPGEF1-207ENST00000481260 NEUROD1Q13562 356 aa16.63■□□□□ 0.25
RAPGEF1-207ENST00000481260 AHDC1Q5TGY3 1603 aaPredicted RBP16.63■□□□□ 0.25
RAPGEF1-207ENST00000481260 PRAM1Q96QH2 718 aa16.62■□□□□ 0.25
RAPGEF1-207ENST00000481260 TRAK1Q9UPV9 953 aa16.62■□□□□ 0.25
RAPGEF1-207ENST00000481260 LAMC1P11047 1609 aa16.6■□□□□ 0.25
RAPGEF1-207ENST00000481260 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
RAPGEF1-207ENST00000481260 L3MBTL2Q969R5 705 aa16.6■□□□□ 0.25
RAPGEF1-207ENST00000481260 RGS17Q9UGC6 210 aaPredicted RBP16.59■□□□□ 0.25
RAPGEF1-207ENST00000481260 CDC42BPGQ6DT37 1551 aa16.59■□□□□ 0.25
RAPGEF1-207ENST00000481260 NHSL1Q5SYE7 1610 aa16.58■□□□□ 0.24
RAPGEF1-207ENST00000481260 LRP6O75581 1613 aa16.57■□□□□ 0.24
RAPGEF1-207ENST00000481260 HIRIP3Q9BW71 556 aaPredicted RBP16.57■□□□□ 0.24
RAPGEF1-207ENST00000481260 JCADQ9P266 1359 aa16.56■□□□□ 0.24
RAPGEF1-207ENST00000481260 XPCQ01831 940 aaPredicted RBP16.56■□□□□ 0.24
RAPGEF1-207ENST00000481260 SIRT1Q96EB6 747 aa16.56■□□□□ 0.24
RAPGEF1-207ENST00000481260 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
RAPGEF1-207ENST00000481260 ESCO1Q5FWF5 840 aa16.55■□□□□ 0.24
RAPGEF1-207ENST00000481260 MINK1Q8N4C8 1332 aaPredicted RBP16.54■□□□□ 0.24
RAPGEF1-207ENST00000481260 POGKQ9P215 609 aa16.54■□□□□ 0.24
RAPGEF1-207ENST00000481260 FMN2Q9NZ56 1722 aa16.53■□□□□ 0.24
RAPGEF1-207ENST00000481260 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
RAPGEF1-207ENST00000481260 NUTM2BA6NNL0 878 aaPredicted RBP16.51■□□□□ 0.23
RAPGEF1-207ENST00000481260 NUTM2EB1AL46 878 aaPredicted RBP16.51■□□□□ 0.23
RAPGEF1-207ENST00000481260 FOXO3O43524 673 aa16.51■□□□□ 0.23
RAPGEF1-207ENST00000481260 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
RAPGEF1-207ENST00000481260 NUTM2AQ8IVF1 878 aaPredicted RBP16.51■□□□□ 0.23
RAPGEF1-207ENST00000481260 STAC3Q96MF2 364 aa16.51■□□□□ 0.23
RAPGEF1-207ENST00000481260 SOS2Q07890 1332 aaPredicted RBP16.5■□□□□ 0.23
RAPGEF1-207ENST00000481260 PRR36Q9H6K5 1346 aa16.5■□□□□ 0.23
RAPGEF1-207ENST00000481260 USP32Q8NFA0 1604 aa16.5■□□□□ 0.23
RAPGEF1-207ENST00000481260 ARHGEF28Q8N1W1 1705 aaKnown RBP16.5■□□□□ 0.23
RAPGEF1-207ENST00000481260 PNPLA6Q8IY17 1366 aa16.5■□□□□ 0.23
RAPGEF1-207ENST00000481260 SHPRHQ149N8 1683 aa16.5■□□□□ 0.23
RAPGEF1-207ENST00000481260 PXDNQ92626 1479 aa16.49■□□□□ 0.23
RAPGEF1-207ENST00000481260 RGPD8O14715 1765 aaPredicted RBP16.49■□□□□ 0.23
RAPGEF1-207ENST00000481260 POTEAQ6S8J7 498 aa16.49■□□□□ 0.23
RAPGEF1-207ENST00000481260 PCGF6Q9BYE7 350 aa16.49■□□□□ 0.23
RAPGEF1-207ENST00000481260 ADGRB2O60241 1585 aa16.47■□□□□ 0.23
RAPGEF1-207ENST00000481260 KIAA1210Q9ULL0 1709 aa16.47■□□□□ 0.23
RAPGEF1-207ENST00000481260 PMFBP1Q8TBY8 1022 aa16.46■□□□□ 0.23
RAPGEF1-207ENST00000481260 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
RAPGEF1-207ENST00000481260 SPATA31A6Q5VVP1 1343 aa16.45■□□□□ 0.22
RAPGEF1-207ENST00000481260 PHF8Q9UPP1 1060 aa16.45■□□□□ 0.22
RAPGEF1-207ENST00000481260 WASLO00401 505 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF1-207ENST00000481260 TRPM1Q7Z4N2 1603 aa16.44■□□□□ 0.22
RAPGEF1-207ENST00000481260 NPHP3Q7Z494 1330 aa16.43■□□□□ 0.22
RAPGEF1-207ENST00000481260 ADAMTS2O95450 1211 aa16.42■□□□□ 0.22
RAPGEF1-207ENST00000481260 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
RAPGEF1-207ENST00000481260 PLEKHG5O94827 1062 aa16.41■□□□□ 0.22
RAPGEF1-207ENST00000481260 KRT28Q7Z3Y7 464 aa16.41■□□□□ 0.22
RAPGEF1-207ENST00000481260 CDK19Q9BWU1 502 aa16.41■□□□□ 0.22
RAPGEF1-207ENST00000481260 TULP4Q9NRJ4 1543 aa16.4■□□□□ 0.22
RAPGEF1-207ENST00000481260 ANKARQ7Z5J8 1434 aa16.4■□□□□ 0.22
RAPGEF1-207ENST00000481260 ATP7BP35670 1465 aa16.4■□□□□ 0.22
RAPGEF1-207ENST00000481260 KIF1AQ12756 1690 aa16.39■□□□□ 0.21
RAPGEF1-207ENST00000481260 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
RAPGEF1-207ENST00000481260 TONSLQ96HA7 1378 aa16.38■□□□□ 0.21
RAPGEF1-207ENST00000481260 NUDT16Q96DE0 195 aaKnown RBP16.38■□□□□ 0.21
RAPGEF1-207ENST00000481260 C8orf37Q96NL8 207 aa16.38■□□□□ 0.21
RAPGEF1-207ENST00000481260 SPATA31A3Q5VYP0 1347 aa16.38■□□□□ 0.21
RAPGEF1-207ENST00000481260 CENPJQ9HC77 1338 aaPredicted RBP16.38■□□□□ 0.21
RAPGEF1-207ENST00000481260 CABLES1Q8TDN4 633 aa16.37■□□□□ 0.21
RAPGEF1-207ENST00000481260 CABP2Q9NPB3 220 aa16.37■□□□□ 0.21
RAPGEF1-207ENST00000481260 AFF2P51816 1311 aa16.37■□□□□ 0.21
RAPGEF1-207ENST00000481260 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
RAPGEF1-207ENST00000481260 QRICH2Q9H0J4 1663 aa16.35■□□□□ 0.21
RAPGEF1-207ENST00000481260 PSME1Q06323 249 aa16.34■□□□□ 0.21
RAPGEF1-207ENST00000481260 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
RAPGEF1-207ENST00000481260 TNS3Q68CZ2 1445 aa16.34■□□□□ 0.21
RAPGEF1-207ENST00000481260 LMOD2Q6P5Q4 547 aa16.33■□□□□ 0.2
RAPGEF1-207ENST00000481260 TRPM3Q9HCF6 1732 aaPredicted RBP16.33■□□□□ 0.2
RAPGEF1-207ENST00000481260 RALGAPBQ86X10 1494 aa16.32■□□□□ 0.2
RAPGEF1-207ENST00000481260 TOPAZ1Q8N9V7 1692 aa16.31■□□□□ 0.2
RAPGEF1-207ENST00000481260 SBNO1A3KN83 1393 aa16.31■□□□□ 0.2
RAPGEF1-207ENST00000481260 EIF3AQ14152 1382 aaKnown RBP16.31■□□□□ 0.2
RAPGEF1-207ENST00000481260 SRPK2P78362 688 aaKnown RBP16.31■□□□□ 0.2
RAPGEF1-207ENST00000481260 NGDNQ8NEJ9 315 aaKnown RBP16.31■□□□□ 0.2
RAPGEF1-207ENST00000481260 ACEP12821 1306 aa16.3■□□□□ 0.2
RAPGEF1-207ENST00000481260 NGLY1Q96IV0 654 aa16.3■□□□□ 0.2
RAPGEF1-207ENST00000481260 CARD11Q9BXL7 1154 aa16.3■□□□□ 0.2
RAPGEF1-207ENST00000481260 NUTM2GQ5VZR2 741 aa16.28■□□□□ 0.2
RAPGEF1-207ENST00000481260 ZNF772Q68DY9 489 aaPredicted RBP16.28■□□□□ 0.2
RAPGEF1-207ENST00000481260 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
RAPGEF1-207ENST00000481260 PPIP5K1Q6PFW1 1433 aa16.28■□□□□ 0.2
RAPGEF1-207ENST00000481260 ALS2Q96Q42 1657 aa16.27■□□□□ 0.2
RAPGEF1-207ENST00000481260 PLEKHG3A1L390 1219 aa16.27■□□□□ 0.2
RAPGEF1-207ENST00000481260 PAK3O75914 559 aaPredicted RBP16.27■□□□□ 0.2
RAPGEF1-207ENST00000481260 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
RAPGEF1-207ENST00000481260 ABCA3Q99758 1704 aa16.26■□□□□ 0.19
RAPGEF1-207ENST00000481260 FNBP4Q8N3X1 1017 aaPredicted RBP16.26■□□□□ 0.19
RAPGEF1-207ENST00000481260 QTRT2Q9H974 415 aaKnown RBP16.26■□□□□ 0.19
RAPGEF1-207ENST00000481260 CABP1Q9NZU7 370 aa16.26■□□□□ 0.19
RAPGEF1-207ENST00000481260 BCL9LQ86UU0 1499 aa16.26■□□□□ 0.19
RAPGEF1-207ENST00000481260 ITSN1Q15811 1721 aa16.25■□□□□ 0.19
RAPGEF1-207ENST00000481260 USP21Q9UK80 565 aa16.25■□□□□ 0.19
RAPGEF1-207ENST00000481260 ARHGEF10O15013 1369 aa16.24■□□□□ 0.19
RAPGEF1-207ENST00000481260 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
RAPGEF1-207ENST00000481260 EVC2Q86UK5 1308 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms