RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
RGPD6-209ENST00000480894 WNT7AO00755 349 aa11.74□□□□□ -0.53
RGPD6-209ENST00000480894 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
RGPD6-209ENST00000480894 SMPD1P17405 629 aa11.73□□□□□ -0.53
RGPD6-209ENST00000480894 WIPF1O43516 503 aa11.72□□□□□ -0.53
RGPD6-209ENST00000480894 SNIP1Q8TAD8 396 aaKnown RBP11.72□□□□□ -0.53
RGPD6-209ENST00000480894 PHOX2BQ99453 314 aa11.72□□□□□ -0.53
RGPD6-209ENST00000480894 STK17AQ9UEE5 414 aa11.71□□□□□ -0.53
RGPD6-209ENST00000480894 TRIM32Q13049 653 aa11.7□□□□□ -0.54
RGPD6-209ENST00000480894 SMYD5Q6GMV2 418 aa11.7□□□□□ -0.54
RGPD6-209ENST00000480894 ATP13A2Q9NQ11 1180 aa11.7□□□□□ -0.54
RGPD6-209ENST00000480894 GRIPAP1Q4V328 841 aa11.69□□□□□ -0.54
RGPD6-209ENST00000480894 SNRPBP14678 240 aaKnown RBP11.67□□□□□ -0.54
RGPD6-209ENST00000480894 MMP16P51512 607 aa11.67□□□□□ -0.54
RGPD6-209ENST00000480894 INSM1Q01101 510 aaPredicted RBP11.67□□□□□ -0.54
RGPD6-209ENST00000480894 MRGPRX2Q96LB1 330 aa11.67□□□□□ -0.54
RGPD6-209ENST00000480894 J3QL48 77 aa11.66□□□□□ -0.54
RGPD6-209ENST00000480894 LCE2CQ5TA81 110 aa11.66□□□□□ -0.54
RGPD6-209ENST00000480894 TRIM47Q96LD4 638 aa11.66□□□□□ -0.54
RGPD6-209ENST00000480894 Q3C1V9 767 aa11.65□□□□□ -0.54
RGPD6-209ENST00000480894 SENP2Q9HC62 589 aa11.64□□□□□ -0.55
RGPD6-209ENST00000480894 TERTO14746 1132 aaKnown RBP11.63□□□□□ -0.55
RGPD6-209ENST00000480894 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
RGPD6-209ENST00000480894 HPS1Q92902 700 aa11.62□□□□□ -0.55
RGPD6-209ENST00000480894 DXOO77932 396 aaKnown RBP11.61□□□□□ -0.55
RGPD6-209ENST00000480894 USB1Q9BQ65 265 aaKnown RBP11.6□□□□□ -0.55
RGPD6-209ENST00000480894 CD46P15529 392 aa11.59□□□□□ -0.55
RGPD6-209ENST00000480894 KIFC2Q96AC6 838 aa11.58□□□□□ -0.56
RGPD6-209ENST00000480894 KDM4AO75164 1064 aa11.56□□□□□ -0.56
RGPD6-209ENST00000480894 SKOR1P84550 965 aa11.56□□□□□ -0.56
RGPD6-209ENST00000480894 RC3H1Q5TC82 1133 aaKnown RBP11.56□□□□□ -0.56
RGPD6-209ENST00000480894 GPIHBP1Q8IV16 184 aa11.56□□□□□ -0.56
RGPD6-209ENST00000480894 CCDC24Q8N4L8 307 aa11.55□□□□□ -0.56
RGPD6-209ENST00000480894 WNT7BP56706 349 aa11.54□□□□□ -0.56
RGPD6-209ENST00000480894 HLA-CQ95604 372 aa11.53□□□□□ -0.56
RGPD6-209ENST00000480894 USP46P62068 366 aa11.5□□□□□ -0.57
RGPD6-209ENST00000480894 HOXA2O43364 376 aa11.48□□□□□ -0.57
RGPD6-209ENST00000480894 ALDH1A1P00352 501 aa11.48□□□□□ -0.57
RGPD6-209ENST00000480894 JUNDP17535 347 aa11.47□□□□□ -0.57
RGPD6-209ENST00000480894 MAP2K5Q13163 448 aa11.47□□□□□ -0.57
RGPD6-209ENST00000480894 SLC16A10Q8TF71 515 aa11.47□□□□□ -0.57
RGPD6-209ENST00000480894 NXF1Q9UBU9 619 aaKnown RBP11.45□□□□□ -0.58
RGPD6-209ENST00000480894 SIAH2O43255 324 aa11.44□□□□□ -0.58
RGPD6-209ENST00000480894 MDM2Q00987 491 aaPredicted RBP11.44□□□□□ -0.58
RGPD6-209ENST00000480894 GUCA2AQ02747 115 aa11.44□□□□□ -0.58
RGPD6-209ENST00000480894 BMP1P13497 986 aa11.43□□□□□ -0.58
RGPD6-209ENST00000480894 TRIM46Q7Z4K8 759 aa11.43□□□□□ -0.58
RGPD6-209ENST00000480894 GMPRP36959 345 aa11.42□□□□□ -0.58
RGPD6-209ENST00000480894 SYMPKQ92797 1274 aaKnown RBP11.42□□□□□ -0.58
RGPD6-209ENST00000480894 FAM181BA6NEQ2 426 aa11.41□□□□□ -0.58
RGPD6-209ENST00000480894 IRF6O14896 467 aa11.41□□□□□ -0.58
RGPD6-209ENST00000480894 PTCRAQ6ISU1 281 aaPredicted RBP11.41□□□□□ -0.58
RGPD6-209ENST00000480894 NPAS3Q8IXF0 933 aa11.41□□□□□ -0.58
RGPD6-209ENST00000480894 EHBP1Q8NDI1 1231 aa11.41□□□□□ -0.58
RGPD6-209ENST00000480894 NUDT12Q9BQG2 462 aa11.41□□□□□ -0.58
RGPD6-209ENST00000480894 CAPN5O15484 640 aaPredicted RBP11.4□□□□□ -0.58
RGPD6-209ENST00000480894 LORP23490 312 aaPredicted RBP11.4□□□□□ -0.58
RGPD6-209ENST00000480894 RETREG3Q86VR2 466 aa11.39□□□□□ -0.59
RGPD6-209ENST00000480894 IRF7Q92985 503 aa11.39□□□□□ -0.59
RGPD6-209ENST00000480894 WASF2Q9Y6W5 498 aa11.39□□□□□ -0.59
RGPD6-209ENST00000480894 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
RGPD6-209ENST00000480894 ZSCAN1Q8NBB4 408 aa11.37□□□□□ -0.59
RGPD6-209ENST00000480894 H3BM21 787 aa11.36□□□□□ -0.59
RGPD6-209ENST00000480894 VEGFBP49765 207 aa11.36□□□□□ -0.59
RGPD6-209ENST00000480894 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
RGPD6-209ENST00000480894 LOC100996750A0A140TA64 210 aa11.35□□□□□ -0.59
RGPD6-209ENST00000480894 SH3BP2P78314 561 aa11.35□□□□□ -0.59
RGPD6-209ENST00000480894 KRTAP4-6Q9BYQ5 205 aa11.35□□□□□ -0.59
RGPD6-209ENST00000480894 GPCPD1Q9NPB8 672 aa11.34□□□□□ -0.59
RGPD6-209ENST00000480894 FAM217BQ9NTX9 383 aaPredicted RBP11.34□□□□□ -0.59
RGPD6-209ENST00000480894 CCNYL3P0C7X3 344 aa11.32□□□□□ -0.6
RGPD6-209ENST00000480894 CLCN1P35523 988 aa11.32□□□□□ -0.6
RGPD6-209ENST00000480894 NUTM1Q86Y26 1132 aa11.32□□□□□ -0.6
RGPD6-209ENST00000480894 CCDC102AQ96A19 550 aa11.32□□□□□ -0.6
RGPD6-209ENST00000480894 ERBB4Q15303 1308 aa11.32□□□□□ -0.6
RGPD6-209ENST00000480894 MS4A1P11836 297 aa11.31□□□□□ -0.6
RGPD6-209ENST00000480894 ZFP42Q96MM3 310 aa11.31□□□□□ -0.6
RGPD6-209ENST00000480894 FDX1P10109 184 aa11.3□□□□□ -0.6
RGPD6-209ENST00000480894 PCDHGC3Q9UN70 934 aa11.3□□□□□ -0.6
RGPD6-209ENST00000480894 UNC93B1Q9H1C4 597 aa11.29□□□□□ -0.6
RGPD6-209ENST00000480894 TLL2Q9Y6L7 1015 aa11.29□□□□□ -0.6
RGPD6-209ENST00000480894 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
RGPD6-209ENST00000480894 PTPRNQ16849 979 aa11.27□□□□□ -0.61
RGPD6-209ENST00000480894 LINC01559Q495D7 138 aa11.26□□□□□ -0.61
RGPD6-209ENST00000480894 EVA1BQ9NVM1 165 aa11.26□□□□□ -0.61
RGPD6-209ENST00000480894 NNTQ13423 1086 aa11.25□□□□□ -0.61
RGPD6-209ENST00000480894 BAP1Q92560 729 aa11.25□□□□□ -0.61
RGPD6-209ENST00000480894 PLEKHG3A1L390 1219 aa11.24□□□□□ -0.61
RGPD6-209ENST00000480894 MRPL14Q6P1L8 145 aaKnown RBP11.24□□□□□ -0.61
RGPD6-209ENST00000480894 MPNDQ8N594 471 aa11.24□□□□□ -0.61
RGPD6-209ENST00000480894 VARSP26640 1264 aaKnown RBP11.23□□□□□ -0.61
RGPD6-209ENST00000480894 KCNH2Q12809 1159 aa11.23□□□□□ -0.61
RGPD6-209ENST00000480894 ZNF511Q8NB15 262 aa11.23□□□□□ -0.61
RGPD6-209ENST00000480894 TULP1O00294 542 aaPredicted RBP11.22□□□□□ -0.61
RGPD6-209ENST00000480894 TIMP2P16035 220 aa11.21□□□□□ -0.61
RGPD6-209ENST00000480894 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
RGPD6-209ENST00000480894 ADH1CP00326 375 aa11.2□□□□□ -0.62
RGPD6-209ENST00000480894 SCARF1Q14162 830 aa11.2□□□□□ -0.62
RGPD6-209ENST00000480894 SPIRE2Q8WWL2 714 aa11.2□□□□□ -0.62
RGPD6-209ENST00000480894 PURBQ96QR8 312 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms