RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 MSS51Q4VC12 460 aa6.54□□□□□ -1.36
R3HDM1-214ENST00000480793 SPRYD3Q8NCJ5 442 aa6.54□□□□□ -1.36
R3HDM1-214ENST00000480793 PXYLP1Q8TE99 480 aa6.54□□□□□ -1.36
R3HDM1-214ENST00000480793 SLC27A5Q9Y2P5 690 aa6.53□□□□□ -1.36
R3HDM1-214ENST00000480793 SALL2Q9Y467 1007 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-214ENST00000480793 H3BM21 787 aa6.52□□□□□ -1.37
R3HDM1-214ENST00000480793 FCHSD2O94868 740 aa6.52□□□□□ -1.37
R3HDM1-214ENST00000480793 FECHP22830 423 aa6.52□□□□□ -1.37
R3HDM1-214ENST00000480793 VEGFBP49765 207 aa6.51□□□□□ -1.37
R3HDM1-214ENST00000480793 BRICD5Q6PL45 260 aa6.51□□□□□ -1.37
R3HDM1-214ENST00000480793 METTL3Q86U44 580 aaKnown RBP6.49□□□□□ -1.37
R3HDM1-214ENST00000480793 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.49□□□□□ -1.37
R3HDM1-214ENST00000480793 ERBB4Q15303 1308 aa6.49□□□□□ -1.37
R3HDM1-214ENST00000480793 DDX11L8A8MPP1 907 aa6.48□□□□□ -1.37
R3HDM1-214ENST00000480793 ALDH1A1P00352 501 aa6.48□□□□□ -1.37
R3HDM1-214ENST00000480793 BMP1P13497 986 aa6.48□□□□□ -1.37
R3HDM1-214ENST00000480793 GRIPAP1Q4V328 841 aa6.48□□□□□ -1.37
R3HDM1-214ENST00000480793 RC3H1Q5TC82 1133 aaKnown RBP6.48□□□□□ -1.37
R3HDM1-214ENST00000480793 RNF19BQ6ZMZ0 732 aa6.48□□□□□ -1.37
R3HDM1-214ENST00000480793 KCTD17Q8N5Z5 321 aa6.48□□□□□ -1.37
R3HDM1-214ENST00000480793 DAXXQ9UER7 740 aaPredicted RBP6.48□□□□□ -1.37
R3HDM1-214ENST00000480793 MMP16P51512 607 aa6.47□□□□□ -1.37
R3HDM1-214ENST00000480793 WNT7BP56706 349 aa6.47□□□□□ -1.37
R3HDM1-214ENST00000480793 KCNMA1Q12791 1236 aa6.47□□□□□ -1.37
R3HDM1-214ENST00000480793 ARHGEF1Q92888 912 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-214ENST00000480793 CAPN5O15484 640 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-214ENST00000480793 GCGRP47871 477 aa6.46□□□□□ -1.38
R3HDM1-214ENST00000480793 Q3C1V9 767 aa6.46□□□□□ -1.38
R3HDM1-214ENST00000480793 TRIM46Q7Z4K8 759 aa6.46□□□□□ -1.38
R3HDM1-214ENST00000480793 SULF1Q8IWU6 871 aa6.45□□□□□ -1.38
R3HDM1-214ENST00000480793 CCDC24Q8N4L8 307 aa6.44□□□□□ -1.38
R3HDM1-214ENST00000480793 WASF2Q9Y6W5 498 aa6.44□□□□□ -1.38
R3HDM1-214ENST00000480793 SKOR1P84550 965 aa6.43□□□□□ -1.38
R3HDM1-214ENST00000480793 HIC1Q14526 733 aa6.43□□□□□ -1.38
R3HDM1-214ENST00000480793 DXOO77932 396 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-214ENST00000480793 TMEM151AQ8N4L1 468 aa6.42□□□□□ -1.38
R3HDM1-214ENST00000480793 CFAP44Q96MT7 982 aa6.42□□□□□ -1.38
R3HDM1-214ENST00000480793 USB1Q9BQ65 265 aaKnown RBP6.41□□□□□ -1.38
R3HDM1-214ENST00000480793 RNF225M0QZC1 329 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-214ENST00000480793 EHBP1Q8NDI1 1231 aa6.4□□□□□ -1.38
R3HDM1-214ENST00000480793 ZFP42Q96MM3 310 aa6.4□□□□□ -1.38
R3HDM1-214ENST00000480793 GDF11O95390 407 aa6.39□□□□□ -1.39
R3HDM1-214ENST00000480793 VSIG8P0DPA2 414 aa6.39□□□□□ -1.39
R3HDM1-214ENST00000480793 PAXIP1Q6ZW49 1069 aaPredicted RBP6.39□□□□□ -1.39
R3HDM1-214ENST00000480793 SCARF1Q14162 830 aa6.38□□□□□ -1.39
R3HDM1-214ENST00000480793 GSK3AP49840 483 aa6.37□□□□□ -1.39
R3HDM1-214ENST00000480793 RASSF7Q02833 373 aa6.37□□□□□ -1.39
R3HDM1-214ENST00000480793 KCNV2Q8TDN2 545 aa6.37□□□□□ -1.39
R3HDM1-214ENST00000480793 NLRP7Q8WX94 980 aa6.37□□□□□ -1.39
R3HDM1-214ENST00000480793 SIAH2O43255 324 aa6.36□□□□□ -1.39
R3HDM1-214ENST00000480793 GNPATO15228 680 aa6.35□□□□□ -1.39
R3HDM1-214ENST00000480793 MRPL14Q6P1L8 145 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-214ENST00000480793 JUNDP17535 347 aa6.33□□□□□ -1.4
R3HDM1-214ENST00000480793 PURBQ96QR8 312 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-214ENST00000480793 SOBPA7XYQ1 873 aa6.32□□□□□ -1.4
R3HDM1-214ENST00000480793 KDM4AO75164 1064 aa6.31□□□□□ -1.4
R3HDM1-214ENST00000480793 NUDT12Q9BQG2 462 aa6.31□□□□□ -1.4
R3HDM1-214ENST00000480793 PLEKHG3A1L390 1219 aa6.3□□□□□ -1.4
R3HDM1-214ENST00000480793 MAN1A2O60476 641 aa6.3□□□□□ -1.4
R3HDM1-214ENST00000480793 IGHA1P01876 353 aa6.3□□□□□ -1.4
R3HDM1-214ENST00000480793 USP46P62068 366 aa6.3□□□□□ -1.4
R3HDM1-214ENST00000480793 NNTQ13423 1086 aa6.3□□□□□ -1.4
R3HDM1-214ENST00000480793 GPAT2Q6NUI2 795 aa6.3□□□□□ -1.4
R3HDM1-214ENST00000480793 ADAMTS8Q9UP79 889 aa6.3□□□□□ -1.4
R3HDM1-214ENST00000480793 SEMA3EO15041 775 aa6.29□□□□□ -1.4
R3HDM1-214ENST00000480793 ADH1CP00326 375 aa6.29□□□□□ -1.4
R3HDM1-214ENST00000480793 CD46P15529 392 aa6.29□□□□□ -1.4
R3HDM1-214ENST00000480793 SH3BP2P78314 561 aa6.29□□□□□ -1.4
R3HDM1-214ENST00000480793 DNMT3AQ9Y6K1 912 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-214ENST00000480793 TLL2Q9Y6L7 1015 aa6.29□□□□□ -1.4
R3HDM1-214ENST00000480793 PPFIA3O75145 1194 aa6.28□□□□□ -1.4
R3HDM1-214ENST00000480793 PTCRAQ6ISU1 281 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-214ENST00000480793 P3H3Q8IVL6 736 aa6.28□□□□□ -1.4
R3HDM1-214ENST00000480793 PHOX2BQ99453 314 aa6.28□□□□□ -1.4
R3HDM1-214ENST00000480793 TIMP2P16035 220 aa6.27□□□□□ -1.41
R3HDM1-214ENST00000480793 WDR4P57081 412 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-214ENST00000480793 XP32Q5T750 250 aa6.27□□□□□ -1.41
R3HDM1-214ENST00000480793 RBM26Q5T8P6 1007 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-214ENST00000480793 HLA-CQ95604 372 aa6.27□□□□□ -1.41
R3HDM1-214ENST00000480793 FOXK2Q01167 660 aa6.26□□□□□ -1.41
R3HDM1-214ENST00000480793 HOXA2O43364 376 aa6.25□□□□□ -1.41
R3HDM1-214ENST00000480793 VARSP26640 1264 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-214ENST00000480793 LINC01559Q495D7 138 aa6.25□□□□□ -1.41
R3HDM1-214ENST00000480793 SMYD5Q6GMV2 418 aa6.25□□□□□ -1.41
R3HDM1-214ENST00000480793 MPNDQ8N594 471 aa6.25□□□□□ -1.41
R3HDM1-214ENST00000480793 CNTNAP3BQ96NU0 1288 aa6.25□□□□□ -1.41
R3HDM1-214ENST00000480793 CNTNAP3Q9BZ76 1288 aa6.25□□□□□ -1.41
R3HDM1-214ENST00000480793 GPR37O15354 613 aa6.24□□□□□ -1.41
R3HDM1-214ENST00000480793 CCNYL3P0C7X3 344 aa6.24□□□□□ -1.41
R3HDM1-214ENST00000480793 IRS1P35568 1242 aa6.24□□□□□ -1.41
R3HDM1-214ENST00000480793 C6orf118Q5T5N4 469 aa6.24□□□□□ -1.41
R3HDM1-214ENST00000480793 RETREG3Q86VR2 466 aa6.24□□□□□ -1.41
R3HDM1-214ENST00000480793 SVOPQ8N4V2 548 aa6.24□□□□□ -1.41
R3HDM1-214ENST00000480793 KANK3Q6NY19 840 aa6.23□□□□□ -1.41
R3HDM1-214ENST00000480793 SYMPKQ92797 1274 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-214ENST00000480793 UNC93B1Q9H1C4 597 aa6.23□□□□□ -1.41
R3HDM1-214ENST00000480793 UPP2O95045 317 aa6.22□□□□□ -1.41
R3HDM1-214ENST00000480793 MS4A1P11836 297 aa6.22□□□□□ -1.41
R3HDM1-214ENST00000480793 KRT76Q01546 638 aa6.22□□□□□ -1.41
R3HDM1-214ENST00000480793 GUCA2AQ02747 115 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms