RNA–Protein interactions for RNA: ENST00000480747.1

CKAP2-206, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 4

Gene CKAP2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-206ENST00000480747 POLR3EQ9NVU0 708 aa10.51□□□□□ -0.73
CKAP2-206ENST00000480747 NR1I2O75469 434 aa10.5□□□□□ -0.73
CKAP2-206ENST00000480747 GGCXP38435 758 aa10.5□□□□□ -0.73
CKAP2-206ENST00000480747 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.5□□□□□ -0.73
CKAP2-206ENST00000480747 FAM217BQ9NTX9 383 aaPredicted RBP10.5□□□□□ -0.73
CKAP2-206ENST00000480747 TLL1O43897 1013 aa10.49□□□□□ -0.73
CKAP2-206ENST00000480747 GCGRP47871 477 aa10.48□□□□□ -0.73
CKAP2-206ENST00000480747 FBXO31Q5XUX0 539 aaPredicted RBP10.48□□□□□ -0.73
CKAP2-206ENST00000480747 MYSM1Q5VVJ2 828 aa10.47□□□□□ -0.73
CKAP2-206ENST00000480747 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.47□□□□□ -0.73
CKAP2-206ENST00000480747 ZBTB7CA1YPR0 619 aa10.46□□□□□ -0.73
CKAP2-206ENST00000480747 PUS10Q3MIT2 529 aaKnown RBP10.46□□□□□ -0.73
CKAP2-206ENST00000480747 FUT2Q10981 343 aa10.45□□□□□ -0.74
CKAP2-206ENST00000480747 COG6Q9Y2V7 657 aa10.45□□□□□ -0.74
CKAP2-206ENST00000480747 ADH1BP00325 375 aa10.44□□□□□ -0.74
CKAP2-206ENST00000480747 CD46P15529 392 aa10.44□□□□□ -0.74
CKAP2-206ENST00000480747 MORN1Q5T089 497 aa10.44□□□□□ -0.74
CKAP2-206ENST00000480747 SCUBE3Q8IX30 993 aa10.44□□□□□ -0.74
CKAP2-206ENST00000480747 IRX2Q9BZI1 471 aaPredicted RBP10.44□□□□□ -0.74
CKAP2-206ENST00000480747 SNRKQ9NRH2 765 aa10.44□□□□□ -0.74
CKAP2-206ENST00000480747 ATP6V1AP38606 617 aa10.43□□□□□ -0.74
CKAP2-206ENST00000480747 PRKD2Q9BZL6 878 aa10.43□□□□□ -0.74
CKAP2-206ENST00000480747 ATP1B4Q9UN42 357 aaPredicted RBP10.43□□□□□ -0.74
CKAP2-206ENST00000480747 SPDYE5A6NIY4 337 aa10.42□□□□□ -0.74
CKAP2-206ENST00000480747 RAD21O60216 631 aa10.42□□□□□ -0.74
CKAP2-206ENST00000480747 V9GY48 417 aaPredicted RBP10.42□□□□□ -0.74
CKAP2-206ENST00000480747 RNF223E7ERA6 249 aa10.4□□□□□ -0.74
CKAP2-206ENST00000480747 S1PR4O95977 384 aa10.4□□□□□ -0.74
CKAP2-206ENST00000480747 CLK2P49760 499 aaKnown RBP10.4□□□□□ -0.74
CKAP2-206ENST00000480747 GRIPAP1Q4V328 841 aa10.4□□□□□ -0.74
CKAP2-206ENST00000480747 CCDC97Q96F63 343 aaPredicted RBP10.4□□□□□ -0.74
CKAP2-206ENST00000480747 SERPINA10Q9UK55 444 aa10.4□□□□□ -0.74
CKAP2-206ENST00000480747 RFC5P40937 340 aa10.39□□□□□ -0.75
CKAP2-206ENST00000480747 SPSB2Q99619 263 aa10.39□□□□□ -0.75
CKAP2-206ENST00000480747 TRAIPQ9BWF2 469 aa10.39□□□□□ -0.75
CKAP2-206ENST00000480747 TBC1D2Q9BYX2 928 aa10.39□□□□□ -0.75
CKAP2-206ENST00000480747 SLC6A16Q9GZN6 736 aa10.39□□□□□ -0.75
CKAP2-206ENST00000480747 CCDC9Q9Y3X0 531 aaKnown RBP10.39□□□□□ -0.75
CKAP2-206ENST00000480747 LIMD1Q9UGP4 676 aa10.38□□□□□ -0.75
CKAP2-206ENST00000480747 SLC27A5Q9Y2P5 690 aa10.38□□□□□ -0.75
CKAP2-206ENST00000480747 KDM4AO75164 1064 aa10.37□□□□□ -0.75
CKAP2-206ENST00000480747 ANKLE1Q8NAG6 615 aa10.37□□□□□ -0.75
CKAP2-206ENST00000480747 THAP11Q96EK4 314 aa10.37□□□□□ -0.75
CKAP2-206ENST00000480747 FMNL1O95466 1100 aaPredicted RBP10.36□□□□□ -0.75
CKAP2-206ENST00000480747 SALL2Q9Y467 1007 aaPredicted RBP10.36□□□□□ -0.75
CKAP2-206ENST00000480747 USP46P62068 366 aa10.35□□□□□ -0.75
CKAP2-206ENST00000480747 BANK1Q8NDB2 785 aa10.35□□□□□ -0.75
CKAP2-206ENST00000480747 RETREG2Q8NC44 543 aa10.34□□□□□ -0.75
CKAP2-206ENST00000480747 MTMR14Q8NCE2 650 aa10.34□□□□□ -0.75
CKAP2-206ENST00000480747 ZNF330Q9Y3S2 320 aaPredicted RBP10.34□□□□□ -0.75
CKAP2-206ENST00000480747 PPEF1O14829 653 aaPredicted RBP10.33□□□□□ -0.76
CKAP2-206ENST00000480747 BRICD5Q6PL45 260 aa10.33□□□□□ -0.76
CKAP2-206ENST00000480747 Q3C1V9 767 aa10.32□□□□□ -0.76
CKAP2-206ENST00000480747 KCTD17Q8N5Z5 321 aa10.32□□□□□ -0.76
CKAP2-206ENST00000480747 HOXA2O43364 376 aa10.31□□□□□ -0.76
CKAP2-206ENST00000480747 SLC19A1P41440 591 aa10.31□□□□□ -0.76
CKAP2-206ENST00000480747 LAPTM4AQ15012 233 aa10.31□□□□□ -0.76
CKAP2-206ENST00000480747 PPP2R2DQ66LE6 453 aa10.31□□□□□ -0.76
CKAP2-206ENST00000480747 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
CKAP2-206ENST00000480747 GDPD2Q9HCC8 539 aa10.31□□□□□ -0.76
CKAP2-206ENST00000480747 FAM160A2Q8N612 972 aaPredicted RBP10.3□□□□□ -0.76
CKAP2-206ENST00000480747 EMID1Q96A84 441 aaPredicted RBP10.3□□□□□ -0.76
CKAP2-206ENST00000480747 MSS51Q4VC12 460 aa10.29□□□□□ -0.76
CKAP2-206ENST00000480747 AEBP1Q8IUX7 1158 aa10.29□□□□□ -0.76
CKAP2-206ENST00000480747 SPIRE2Q8WWL2 714 aa10.29□□□□□ -0.76
CKAP2-206ENST00000480747 IRF5Q13568 498 aa10.28□□□□□ -0.76
CKAP2-206ENST00000480747 TMEM259Q4ZIN3 620 aa10.28□□□□□ -0.76
CKAP2-206ENST00000480747 RIC3Q7Z5B4 369 aa10.28□□□□□ -0.76
CKAP2-206ENST00000480747 NUTM1Q86Y26 1132 aa10.28□□□□□ -0.76
CKAP2-206ENST00000480747 HLA-CQ95604 372 aa10.28□□□□□ -0.76
CKAP2-206ENST00000480747 PRDM9Q9NQV7 894 aa10.28□□□□□ -0.76
CKAP2-206ENST00000480747 POM121CA8CG34 1229 aa10.27□□□□□ -0.77
CKAP2-206ENST00000480747 GFRA3O60609 400 aa10.27□□□□□ -0.77
CKAP2-206ENST00000480747 PLA2G2CQ5R387 149 aa10.27□□□□□ -0.77
CKAP2-206ENST00000480747 NRG2O14511 850 aaPredicted RBP10.26□□□□□ -0.77
CKAP2-206ENST00000480747 SPRYD7Q5W111 196 aa10.26□□□□□ -0.77
CKAP2-206ENST00000480747 LIAT1Q6ZQX7 453 aa10.26□□□□□ -0.77
CKAP2-206ENST00000480747 FCF1Q9Y324 198 aaKnown RBP10.26□□□□□ -0.77
CKAP2-206ENST00000480747 QPCTQ16769 361 aa10.25□□□□□ -0.77
CKAP2-206ENST00000480747 Q6ZNB5 142 aa10.25□□□□□ -0.77
CKAP2-206ENST00000480747 SPTLC1O15269 473 aa10.24□□□□□ -0.77
CKAP2-206ENST00000480747 DIXDC1Q155Q3 683 aa10.24□□□□□ -0.77
CKAP2-206ENST00000480747 RSBN1LQ6PCB5 846 aaPredicted RBP10.24□□□□□ -0.77
CKAP2-206ENST00000480747 ZNF598Q86UK7 904 aaKnown RBP10.24□□□□□ -0.77
CKAP2-206ENST00000480747 USB1Q9BQ65 265 aaKnown RBP10.24□□□□□ -0.77
CKAP2-206ENST00000480747 PDZRN3Q9UPQ7 1066 aa10.24□□□□□ -0.77
CKAP2-206ENST00000480747 TBC1D2BQ9UPU7 963 aa10.24□□□□□ -0.77
CKAP2-206ENST00000480747 ABL2P42684 1182 aa10.23□□□□□ -0.77
CKAP2-206ENST00000480747 GUCA2AQ02747 115 aa10.23□□□□□ -0.77
CKAP2-206ENST00000480747 CSPP1Q1MSJ5 1256 aa10.23□□□□□ -0.77
CKAP2-206ENST00000480747 MOXD2PA6NHM9 499 aa10.22□□□□□ -0.77
CKAP2-206ENST00000480747 MMP16P51512 607 aa10.22□□□□□ -0.77
CKAP2-206ENST00000480747 TUSC1Q2TAM9 212 aa10.22□□□□□ -0.77
CKAP2-206ENST00000480747 ZNF697Q5TEC3 545 aa10.22□□□□□ -0.77
CKAP2-206ENST00000480747 GLMNQ92990 594 aa10.22□□□□□ -0.77
CKAP2-206ENST00000480747 RPIAP49247 311 aa10.21□□□□□ -0.77
CKAP2-206ENST00000480747 CALR3Q96L12 384 aaKnown RBP10.21□□□□□ -0.77
CKAP2-206ENST00000480747 FDX1P10109 184 aa10.2□□□□□ -0.78
CKAP2-206ENST00000480747 NDUFV2P19404 249 aa10.2□□□□□ -0.78
CKAP2-206ENST00000480747 RTL5Q5HYW3 569 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms