RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 DISP3Q9P2K9 1392 aa18.37■□□□□ 0.53
COL4A2-206ENST00000480609 TULP4Q9NRJ4 1543 aa18.35■□□□□ 0.53
COL4A2-206ENST00000480609 PLEKHH1Q9ULM0 1364 aa18.35■□□□□ 0.53
COL4A2-206ENST00000480609 EVC2Q86UK5 1308 aa18.35■□□□□ 0.53
COL4A2-206ENST00000480609 POGKQ9P215 609 aa18.35■□□□□ 0.53
COL4A2-206ENST00000480609 WAPLQ7Z5K2 1190 aa18.33■□□□□ 0.52
COL4A2-206ENST00000480609 NINLQ9Y2I6 1382 aa18.32■□□□□ 0.52
COL4A2-206ENST00000480609 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
COL4A2-206ENST00000480609 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.31■□□□□ 0.52
COL4A2-206ENST00000480609 ATAD2Q6PL18 1390 aa18.3■□□□□ 0.52
COL4A2-206ENST00000480609 WASLO00401 505 aaPredicted RBP18.29■□□□□ 0.52
COL4A2-206ENST00000480609 ADGRL3Q9HAR2 1447 aa18.29■□□□□ 0.52
COL4A2-206ENST00000480609 CDC42BPGQ6DT37 1551 aa18.28■□□□□ 0.52
COL4A2-206ENST00000480609 DCCP43146 1447 aa18.27■□□□□ 0.52
COL4A2-206ENST00000480609 STRCP1A6NGW2 1772 aa18.27■□□□□ 0.51
COL4A2-206ENST00000480609 MINK1Q8N4C8 1332 aaPredicted RBP18.25■□□□□ 0.51
COL4A2-206ENST00000480609 ANKARQ7Z5J8 1434 aa18.25■□□□□ 0.51
COL4A2-206ENST00000480609 CDK19Q9BWU1 502 aa18.24■□□□□ 0.51
COL4A2-206ENST00000480609 MYOM1P52179 1685 aa18.23■□□□□ 0.51
COL4A2-206ENST00000480609 SAFB2Q14151 953 aaKnown RBP eCLIP18.23■□□□□ 0.51
COL4A2-206ENST00000480609 ATP7BP35670 1465 aa18.22■□□□□ 0.51
COL4A2-206ENST00000480609 NALCNQ8IZF0 1738 aa18.21■□□□□ 0.51
COL4A2-206ENST00000480609 TMEM94Q12767 1356 aa18.21■□□□□ 0.51
COL4A2-206ENST00000480609 DDX10Q13206 875 aaKnown RBP18.21■□□□□ 0.51
COL4A2-206ENST00000480609 AEBP2Q6ZN18 517 aaPredicted RBP18.21■□□□□ 0.51
COL4A2-206ENST00000480609 PROSER2Q86WR7 435 aaPredicted RBP18.21■□□□□ 0.51
COL4A2-206ENST00000480609 C19orf44Q9H6X5 657 aa18.21■□□□□ 0.51
COL4A2-206ENST00000480609 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.51
COL4A2-206ENST00000480609 CCDC61Q9Y6R9 512 aa18.2■□□□□ 0.5
COL4A2-206ENST00000480609 FMN2Q9NZ56 1722 aa18.2■□□□□ 0.5
COL4A2-206ENST00000480609 PER1O15534 1290 aaPredicted RBP18.19■□□□□ 0.5
COL4A2-206ENST00000480609 SRPK2P78362 688 aaKnown RBP18.19■□□□□ 0.5
COL4A2-206ENST00000480609 CABP2Q9NPB3 220 aa18.19■□□□□ 0.5
COL4A2-206ENST00000480609 ZNF335Q9H4Z2 1342 aaPredicted RBP18.19■□□□□ 0.5
COL4A2-206ENST00000480609 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
COL4A2-206ENST00000480609 PLEKHG3A1L390 1219 aa18.18■□□□□ 0.5
COL4A2-206ENST00000480609 DIEXFQ68CQ4 756 aaKnown RBP18.18■□□□□ 0.5
COL4A2-206ENST00000480609 LTBP4Q8N2S1 1624 aa18.18■□□□□ 0.5
COL4A2-206ENST00000480609 TOPAZ1Q8N9V7 1692 aa18.18■□□□□ 0.5
COL4A2-206ENST00000480609 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
COL4A2-206ENST00000480609 NUDT16Q96DE0 195 aaKnown RBP18.17■□□□□ 0.5
COL4A2-206ENST00000480609 PRR36Q9H6K5 1346 aa18.17■□□□□ 0.5
COL4A2-206ENST00000480609 CPSF1Q10570 1443 aaKnown RBP18.16■□□□□ 0.5
COL4A2-206ENST00000480609 USP32Q8NFA0 1604 aa18.16■□□□□ 0.5
COL4A2-206ENST00000480609 CD163L1Q9NR16 1453 aa18.15■□□□□ 0.5
COL4A2-206ENST00000480609 XIRP1Q702N8 1843 aaKnown RBP18.15■□□□□ 0.5
COL4A2-206ENST00000480609 ITSN1Q15811 1721 aa18.14■□□□□ 0.49
COL4A2-206ENST00000480609 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
COL4A2-206ENST00000480609 PANK3Q9H999 370 aa18.13■□□□□ 0.49
COL4A2-206ENST00000480609 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
COL4A2-206ENST00000480609 BRD4O60885 1362 aaPredicted RBP18.13■□□□□ 0.49
COL4A2-206ENST00000480609 KTN1Q86UP2 1357 aaKnown RBP18.13■□□□□ 0.49
COL4A2-206ENST00000480609 CADPS2Q86UW7 1296 aa18.12■□□□□ 0.49
COL4A2-206ENST00000480609 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
COL4A2-206ENST00000480609 TERF2IPQ9NYB0 399 aa18.12■□□□□ 0.49
COL4A2-206ENST00000480609 MSH6P52701 1360 aa18.12■□□□□ 0.49
COL4A2-206ENST00000480609 PPIP5K1Q6PFW1 1433 aa18.12■□□□□ 0.49
COL4A2-206ENST00000480609 MST1RQ04912 1400 aa18.1■□□□□ 0.49
COL4A2-206ENST00000480609 A0A1W2PP64 1363 aa18.1■□□□□ 0.49
COL4A2-206ENST00000480609 CABP1Q9NZU7 370 aa18.1■□□□□ 0.49
COL4A2-206ENST00000480609 IQSEC2Q5JU85 1478 aa18.09■□□□□ 0.49
COL4A2-206ENST00000480609 POLR3GLQ9BT43 218 aa18.09■□□□□ 0.49
COL4A2-206ENST00000480609 C1orf167Q5SNV9 1468 aa18.08■□□□□ 0.49
COL4A2-206ENST00000480609 AMER1Q5JTC6 1135 aaPredicted RBP18.08■□□□□ 0.48
COL4A2-206ENST00000480609 HDGFL2Q7Z4V5 671 aaPredicted RBP18.08■□□□□ 0.48
COL4A2-206ENST00000480609 CARD14Q9BXL6 1004 aa18.08■□□□□ 0.48
COL4A2-206ENST00000480609 SSH2Q76I76 1423 aa18.07■□□□□ 0.48
COL4A2-206ENST00000480609 NSD2O96028 1365 aa18.07■□□□□ 0.48
COL4A2-206ENST00000480609 TMC1Q8TDI8 760 aa18.07■□□□□ 0.48
COL4A2-206ENST00000480609 AKAP12Q02952 1782 aa18.07■□□□□ 0.48
COL4A2-206ENST00000480609 EDC4Q6P2E9 1401 aaKnown RBP18.06■□□□□ 0.48
COL4A2-206ENST00000480609 ATF3P18847 181 aa18.06■□□□□ 0.48
COL4A2-206ENST00000480609 C14orf37Q86TY3 774 aa18.06■□□□□ 0.48
COL4A2-206ENST00000480609 KNSTRNQ9Y448 316 aa18.06■□□□□ 0.48
COL4A2-206ENST00000480609 MON2Q7Z3U7 1717 aa18.06■□□□□ 0.48
COL4A2-206ENST00000480609 KIF1AQ12756 1690 aa18.04■□□□□ 0.48
COL4A2-206ENST00000480609 RBM33Q96EV2 1170 aaKnown RBP18.04■□□□□ 0.48
COL4A2-206ENST00000480609 USP6P35125 1406 aa18.04■□□□□ 0.48
COL4A2-206ENST00000480609 NSD3Q9BZ95 1437 aa18.04■□□□□ 0.48
COL4A2-206ENST00000480609 ACEP12821 1306 aa18.03■□□□□ 0.48
COL4A2-206ENST00000480609 PRKRIP1Q9H875 184 aaPredicted RBP18.03■□□□□ 0.48
COL4A2-206ENST00000480609 PHF8Q9UPP1 1060 aa18.03■□□□□ 0.48
COL4A2-206ENST00000480609 PARD3Q8TEW0 1356 aa18.03■□□□□ 0.48
COL4A2-206ENST00000480609 CGNL1Q0VF96 1302 aa18.02■□□□□ 0.48
COL4A2-206ENST00000480609 RGPD8O14715 1765 aaPredicted RBP18.02■□□□□ 0.48
COL4A2-206ENST00000480609 ANP32CO43423 234 aa18.02■□□□□ 0.48
COL4A2-206ENST00000480609 RALBP1Q15311 655 aa18.02■□□□□ 0.48
COL4A2-206ENST00000480609 NRKQ7Z2Y5 1582 aa18.01■□□□□ 0.47
COL4A2-206ENST00000480609 TTC21AQ8NDW8 1320 aa17.99■□□□□ 0.47
COL4A2-206ENST00000480609 USP31Q70CQ4 1352 aa17.97■□□□□ 0.47
COL4A2-206ENST00000480609 CCER2I3L3R5 266 aa17.97■□□□□ 0.47
COL4A2-206ENST00000480609 SLAIN2Q9P270 581 aa17.97■□□□□ 0.47
COL4A2-206ENST00000480609 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
COL4A2-206ENST00000480609 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
COL4A2-206ENST00000480609 USP54Q70EL1 1684 aa17.96■□□□□ 0.47
COL4A2-206ENST00000480609 NUTM2FA1L443 756 aa17.96■□□□□ 0.47
COL4A2-206ENST00000480609 FYB1O15117 783 aa17.96■□□□□ 0.47
COL4A2-206ENST00000480609 ESCO1Q5FWF5 840 aa17.96■□□□□ 0.47
COL4A2-206ENST00000480609 NGDNQ8NEJ9 315 aaKnown RBP17.96■□□□□ 0.47
COL4A2-206ENST00000480609 ORAI2Q96SN7 254 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms