RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ADGRL3Q9HAR2 1447 aa17.65■□□□□ 0.42
TRAPPC12-218ENST00000479897 SLC24A1O60721 1099 aa17.65■□□□□ 0.42
TRAPPC12-218ENST00000479897 TESK2Q96S53 571 aa17.65■□□□□ 0.42
TRAPPC12-218ENST00000479897 TULP4Q9NRJ4 1543 aa17.65■□□□□ 0.42
TRAPPC12-218ENST00000479897 POGKQ9P215 609 aa17.63■□□□□ 0.41
TRAPPC12-218ENST00000479897 DCCP43146 1447 aa17.63■□□□□ 0.41
TRAPPC12-218ENST00000479897 FMN2Q9NZ56 1722 aa17.62■□□□□ 0.41
TRAPPC12-218ENST00000479897 WAPLQ7Z5K2 1190 aa17.62■□□□□ 0.41
TRAPPC12-218ENST00000479897 TMEM94Q12767 1356 aa17.61■□□□□ 0.41
TRAPPC12-218ENST00000479897 PROSER2Q86WR7 435 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC12-218ENST00000479897 TOPAZ1Q8N9V7 1692 aa17.58■□□□□ 0.4
TRAPPC12-218ENST00000479897 IQSEC2Q5JU85 1478 aa17.57■□□□□ 0.4
TRAPPC12-218ENST00000479897 DISP3Q9P2K9 1392 aa17.57■□□□□ 0.4
TRAPPC12-218ENST00000479897 ITSN1Q15811 1721 aa17.57■□□□□ 0.4
TRAPPC12-218ENST00000479897 MYOM1P52179 1685 aa17.57■□□□□ 0.4
TRAPPC12-218ENST00000479897 EVC2Q86UK5 1308 aa17.56■□□□□ 0.4
TRAPPC12-218ENST00000479897 MINK1Q8N4C8 1332 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC12-218ENST00000479897 TMF1P82094 1093 aa17.56■□□□□ 0.4
TRAPPC12-218ENST00000479897 SAFB2Q14151 953 aaKnown RBP eCLIP17.56■□□□□ 0.4
TRAPPC12-218ENST00000479897 PUS7Q96PZ0 661 aaKnown RBP17.56■□□□□ 0.4
TRAPPC12-218ENST00000479897 USP32Q8NFA0 1604 aa17.56■□□□□ 0.4
TRAPPC12-218ENST00000479897 ATP7BP35670 1465 aa17.55■□□□□ 0.4
TRAPPC12-218ENST00000479897 ANKARQ7Z5J8 1434 aa17.55■□□□□ 0.4
TRAPPC12-218ENST00000479897 HIRIP3Q9BW71 556 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC12-218ENST00000479897 WASLO00401 505 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC12-218ENST00000479897 CDCA8Q53HL2 280 aa17.53■□□□□ 0.4
TRAPPC12-218ENST00000479897 MSH6P52701 1360 aa17.53■□□□□ 0.4
TRAPPC12-218ENST00000479897 C19orf44Q9H6X5 657 aa17.52■□□□□ 0.4
TRAPPC12-218ENST00000479897 ATAD2Q6PL18 1390 aa17.52■□□□□ 0.39
TRAPPC12-218ENST00000479897 CCDC7Q96M83 1385 aa17.52■□□□□ 0.39
TRAPPC12-218ENST00000479897 KIF7Q2M1P5 1343 aa17.5■□□□□ 0.39
TRAPPC12-218ENST00000479897 ZNF316A6NFI3 1004 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC12-218ENST00000479897 RGPD8O14715 1765 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC12-218ENST00000479897 NINLQ9Y2I6 1382 aa17.5■□□□□ 0.39
TRAPPC12-218ENST00000479897 MST1RQ04912 1400 aa17.49■□□□□ 0.39
TRAPPC12-218ENST00000479897 C11orf95C9JLR9 678 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC12-218ENST00000479897 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
TRAPPC12-218ENST00000479897 WASHC2AQ641Q2 1341 aa17.48■□□□□ 0.39
TRAPPC12-218ENST00000479897 C14orf37Q86TY3 774 aa17.48■□□□□ 0.39
TRAPPC12-218ENST00000479897 RBM33Q96EV2 1170 aaKnown RBP17.48■□□□□ 0.39
TRAPPC12-218ENST00000479897 KIF1AQ12756 1690 aa17.48■□□□□ 0.39
TRAPPC12-218ENST00000479897 SRPK2P78362 688 aaKnown RBP17.46■□□□□ 0.39
TRAPPC12-218ENST00000479897 CADPS2Q86UW7 1296 aa17.46■□□□□ 0.39
TRAPPC12-218ENST00000479897 PRR36Q9H6K5 1346 aa17.46■□□□□ 0.38
TRAPPC12-218ENST00000479897 AKAP12Q02952 1782 aa17.45■□□□□ 0.38
TRAPPC12-218ENST00000479897 C1orf167Q5SNV9 1468 aa17.45■□□□□ 0.38
TRAPPC12-218ENST00000479897 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
TRAPPC12-218ENST00000479897 ATF3P18847 181 aa17.43■□□□□ 0.38
TRAPPC12-218ENST00000479897 NUDT16Q96DE0 195 aaKnown RBP17.43■□□□□ 0.38
TRAPPC12-218ENST00000479897 MON2Q7Z3U7 1717 aa17.43■□□□□ 0.38
TRAPPC12-218ENST00000479897 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
TRAPPC12-218ENST00000479897 CCDC61Q9Y6R9 512 aa17.42■□□□□ 0.38
TRAPPC12-218ENST00000479897 CD163L1Q9NR16 1453 aa17.41■□□□□ 0.38
TRAPPC12-218ENST00000479897 NRKQ7Z2Y5 1582 aa17.4■□□□□ 0.38
TRAPPC12-218ENST00000479897 POLR3AO14802 1390 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC12-218ENST00000479897 ANKRD36BQ8N2N9 1353 aa17.4■□□□□ 0.38
TRAPPC12-218ENST00000479897 CPSF1Q10570 1443 aaKnown RBP17.39■□□□□ 0.38
TRAPPC12-218ENST00000479897 NHSL1Q5SYE7 1610 aa17.39■□□□□ 0.37
TRAPPC12-218ENST00000479897 PLEKHG3A1L390 1219 aa17.38■□□□□ 0.37
TRAPPC12-218ENST00000479897 CERKQ8TCT0 537 aa17.38■□□□□ 0.37
TRAPPC12-218ENST00000479897 ROBO1Q9Y6N7 1651 aa17.36■□□□□ 0.37
TRAPPC12-218ENST00000479897 A0A1W2PP64 1363 aa17.36■□□□□ 0.37
TRAPPC12-218ENST00000479897 NUTM2FA1L443 756 aa17.35■□□□□ 0.37
TRAPPC12-218ENST00000479897 SLAIN2Q9P270 581 aa17.35■□□□□ 0.37
TRAPPC12-218ENST00000479897 BRD4O60885 1362 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC12-218ENST00000479897 AHDC1Q5TGY3 1603 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC12-218ENST00000479897 POLR3GLQ9BT43 218 aa17.34■□□□□ 0.37
TRAPPC12-218ENST00000479897 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
TRAPPC12-218ENST00000479897 TRPM3Q9HCF6 1732 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC12-218ENST00000479897 CABP1Q9NZU7 370 aa17.34■□□□□ 0.37
TRAPPC12-218ENST00000479897 TERF2IPQ9NYB0 399 aa17.33■□□□□ 0.36
TRAPPC12-218ENST00000479897 PHF8Q9UPP1 1060 aa17.33■□□□□ 0.36
TRAPPC12-218ENST00000479897 USP6P35125 1406 aa17.32■□□□□ 0.36
TRAPPC12-218ENST00000479897 EDC4Q6P2E9 1401 aaKnown RBP17.32■□□□□ 0.36
TRAPPC12-218ENST00000479897 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
TRAPPC12-218ENST00000479897 TMC1Q8TDI8 760 aa17.32■□□□□ 0.36
TRAPPC12-218ENST00000479897 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
TRAPPC12-218ENST00000479897 USP54Q70EL1 1684 aa17.32■□□□□ 0.36
TRAPPC12-218ENST00000479897 SSH2Q76I76 1423 aa17.31■□□□□ 0.36
TRAPPC12-218ENST00000479897 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
TRAPPC12-218ENST00000479897 ACEP12821 1306 aa17.31■□□□□ 0.36
TRAPPC12-218ENST00000479897 TOM1O60784 492 aa17.31■□□□□ 0.36
TRAPPC12-218ENST00000479897 BRINP3Q76B58 766 aa17.31■□□□□ 0.36
TRAPPC12-218ENST00000479897 PXDNQ92626 1479 aa17.31■□□□□ 0.36
TRAPPC12-218ENST00000479897 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
TRAPPC12-218ENST00000479897 HDGFL2Q7Z4V5 671 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC12-218ENST00000479897 ZNF692Q9BU19 519 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC12-218ENST00000479897 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
TRAPPC12-218ENST00000479897 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
TRAPPC12-218ENST00000479897 NSD3Q9BZ95 1437 aa17.29■□□□□ 0.36
TRAPPC12-218ENST00000479897 NPHP3Q7Z494 1330 aa17.28■□□□□ 0.36
TRAPPC12-218ENST00000479897 PMFBP1Q8TBY8 1022 aa17.28■□□□□ 0.36
TRAPPC12-218ENST00000479897 PANK3Q9H999 370 aa17.28■□□□□ 0.36
TRAPPC12-218ENST00000479897 DDX10Q13206 875 aaKnown RBP17.27■□□□□ 0.36
TRAPPC12-218ENST00000479897 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
TRAPPC12-218ENST00000479897 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.35
TRAPPC12-218ENST00000479897 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
TRAPPC12-218ENST00000479897 PER1O15534 1290 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC12-218ENST00000479897 COL16A1Q07092 1604 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC12-218ENST00000479897 UBAP1LF5GYI3 381 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms