RNA–Protein interactions for RNA: ENST00000479820.1

SEMA6C-206, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-206ENST00000479820 COL22A1Q8NFW1 1626 aaPredicted RBP22.49■■□□□ 1.19
SEMA6C-206ENST00000479820 DLC1Q96QB1 1528 aa22.48■■□□□ 1.19
SEMA6C-206ENST00000479820 PNPLA6Q8IY17 1366 aa22.48■■□□□ 1.19
SEMA6C-206ENST00000479820 TMEM132EQ6IEE7 984 aa22.47■■□□□ 1.19
SEMA6C-206ENST00000479820 RGPD8O14715 1765 aaPredicted RBP22.47■■□□□ 1.19
SEMA6C-206ENST00000479820 PLEKHH1Q9ULM0 1364 aa22.47■■□□□ 1.19
SEMA6C-206ENST00000479820 KIF1AQ12756 1690 aa22.46■■□□□ 1.19
SEMA6C-206ENST00000479820 LRRC59Q96AG4 307 aaKnown RBP22.46■■□□□ 1.19
SEMA6C-206ENST00000479820 SIRT1Q96EB6 747 aa22.46■■□□□ 1.19
SEMA6C-206ENST00000479820 SOS2Q07890 1332 aaPredicted RBP22.46■■□□□ 1.19
SEMA6C-206ENST00000479820 ADGRB2O60241 1585 aa22.44■■□□□ 1.18
SEMA6C-206ENST00000479820 PXDNQ92626 1479 aa22.44■■□□□ 1.18
SEMA6C-206ENST00000479820 DDX17Q92841 729 aaKnown RBP22.44■■□□□ 1.18
SEMA6C-206ENST00000479820 ORAI2Q96SN7 254 aa22.44■■□□□ 1.18
SEMA6C-206ENST00000479820 WAPLQ7Z5K2 1190 aa22.43■■□□□ 1.18
SEMA6C-206ENST00000479820 STK26Q9P289 416 aa22.43■■□□□ 1.18
SEMA6C-206ENST00000479820 CFAP70Q5T0N1 1121 aa22.42■■□□□ 1.18
SEMA6C-206ENST00000479820 MARF1Q9Y4F3 1742 aaKnown RBP22.42■■□□□ 1.18
SEMA6C-206ENST00000479820 DHX57Q6P158 1386 aaKnown RBP22.41■■□□□ 1.18
SEMA6C-206ENST00000479820 ARHGEF28Q8N1W1 1705 aaKnown RBP22.39■■□□□ 1.17
SEMA6C-206ENST00000479820 KIAA1210Q9ULL0 1709 aa22.39■■□□□ 1.17
SEMA6C-206ENST00000479820 STAC3Q96MF2 364 aa22.38■■□□□ 1.17
SEMA6C-206ENST00000479820 USP32Q8NFA0 1604 aa22.38■■□□□ 1.17
SEMA6C-206ENST00000479820 NPHP3Q7Z494 1330 aa22.36■■□□□ 1.17
SEMA6C-206ENST00000479820 MEX3CQ5U5Q3 659 aaKnown RBP22.36■■□□□ 1.17
SEMA6C-206ENST00000479820 ZNF772Q68DY9 489 aaPredicted RBP22.36■■□□□ 1.17
SEMA6C-206ENST00000479820 NUTM2BA6NNL0 878 aaPredicted RBP22.33■■□□□ 1.17
SEMA6C-206ENST00000479820 NUTM2EB1AL46 878 aaPredicted RBP22.33■■□□□ 1.17
SEMA6C-206ENST00000479820 ESCO1Q5FWF5 840 aa22.33■■□□□ 1.17
SEMA6C-206ENST00000479820 NUTM2AQ8IVF1 878 aaPredicted RBP22.33■■□□□ 1.17
SEMA6C-206ENST00000479820 CDK12Q9NYV4 1490 aaPredicted RBP22.33■■□□□ 1.16
SEMA6C-206ENST00000479820 DCAF11Q8TEB1 546 aa22.31■■□□□ 1.16
SEMA6C-206ENST00000479820 PRAM1Q96QH2 718 aa22.3■■□□□ 1.16
SEMA6C-206ENST00000479820 ANKARQ7Z5J8 1434 aa22.3■■□□□ 1.16
SEMA6C-206ENST00000479820 AFF2P51816 1311 aa22.3■■□□□ 1.16
SEMA6C-206ENST00000479820 ABCA3Q99758 1704 aa22.29■■□□□ 1.16
SEMA6C-206ENST00000479820 FOXO3O43524 673 aa22.27■■□□□ 1.16
SEMA6C-206ENST00000479820 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.27■■□□□ 1.16
SEMA6C-206ENST00000479820 TRPM3Q9HCF6 1732 aaPredicted RBP22.27■■□□□ 1.16
SEMA6C-206ENST00000479820 ITSN1Q15811 1721 aa22.26■■□□□ 1.15
SEMA6C-206ENST00000479820 NUTM2FA1L443 756 aa22.26■■□□□ 1.15
SEMA6C-206ENST00000479820 KDM2AQ9Y2K7 1162 aa22.26■■□□□ 1.15
SEMA6C-206ENST00000479820 TULP4Q9NRJ4 1543 aa22.26■■□□□ 1.15
SEMA6C-206ENST00000479820 C8orf37Q96NL8 207 aa22.23■■□□□ 1.15
SEMA6C-206ENST00000479820 ALS2Q96Q42 1657 aa22.23■■□□□ 1.15
SEMA6C-206ENST00000479820 SPATA31A3Q5VYP0 1347 aa22.22■■□□□ 1.15
SEMA6C-206ENST00000479820 TNS3Q68CZ2 1445 aa22.22■■□□□ 1.15
SEMA6C-206ENST00000479820 XPCQ01831 940 aaPredicted RBP22.21■■□□□ 1.15
SEMA6C-206ENST00000479820 SAFB2Q14151 953 aaKnown RBP eCLIP22.21■■□□□ 1.15
SEMA6C-206ENST00000479820 POGKQ9P215 609 aa22.21■■□□□ 1.15
SEMA6C-206ENST00000479820 PHF8Q9UPP1 1060 aa22.21■■□□□ 1.15
SEMA6C-206ENST00000479820 TRAK1Q9UPV9 953 aa22.21■■□□□ 1.15
SEMA6C-206ENST00000479820 TOPAZ1Q8N9V7 1692 aa22.2■■□□□ 1.15
SEMA6C-206ENST00000479820 RXRBP28702 533 aa22.2■■□□□ 1.14
SEMA6C-206ENST00000479820 EIF3AQ14152 1382 aaKnown RBP22.2■■□□□ 1.14
SEMA6C-206ENST00000479820 ADAMTS2O95450 1211 aa22.19■■□□□ 1.14
SEMA6C-206ENST00000479820 FNBP4Q8N3X1 1017 aaPredicted RBP22.19■■□□□ 1.14
SEMA6C-206ENST00000479820 SBNO1A3KN83 1393 aa22.19■■□□□ 1.14
SEMA6C-206ENST00000479820 CRYBG1Q9Y4K1 1723 aa22.19■■□□□ 1.14
SEMA6C-206ENST00000479820 RGS12O14924 1447 aa22.18■■□□□ 1.14
SEMA6C-206ENST00000479820 ATRNO75882 1429 aa22.18■■□□□ 1.14
SEMA6C-206ENST00000479820 ATP7BP35670 1465 aa22.17■■□□□ 1.14
SEMA6C-206ENST00000479820 NWD2Q9ULI1 1742 aa22.17■■□□□ 1.14
SEMA6C-206ENST00000479820 BCL9LQ86UU0 1499 aa22.16■■□□□ 1.14
SEMA6C-206ENST00000479820 PRR36Q9H6K5 1346 aa22.16■■□□□ 1.14
SEMA6C-206ENST00000479820 KRT28Q7Z3Y7 464 aa22.16■■□□□ 1.14
SEMA6C-206ENST00000479820 NGLY1Q96IV0 654 aa22.16■■□□□ 1.14
SEMA6C-206ENST00000479820 PLCH1Q4KWH8 1693 aa22.16■■□□□ 1.14
SEMA6C-206ENST00000479820 RBM6P78332 1123 aaKnown RBP22.15■■□□□ 1.14
SEMA6C-206ENST00000479820 QTRT2Q9H974 415 aaKnown RBP22.15■■□□□ 1.14
SEMA6C-206ENST00000479820 TRPM1Q7Z4N2 1603 aa22.15■■□□□ 1.14
SEMA6C-206ENST00000479820 SLIT2O94813 1529 aa22.15■■□□□ 1.14
SEMA6C-206ENST00000479820 MINK1Q8N4C8 1332 aaPredicted RBP22.14■■□□□ 1.14
SEMA6C-206ENST00000479820 WASLO00401 505 aaPredicted RBP22.14■■□□□ 1.13
SEMA6C-206ENST00000479820 HIRIP3Q9BW71 556 aaPredicted RBP22.14■■□□□ 1.13
SEMA6C-206ENST00000479820 USP21Q9UK80 565 aa22.12■■□□□ 1.13
SEMA6C-206ENST00000479820 ARHGEF10O15013 1369 aa22.12■■□□□ 1.13
SEMA6C-206ENST00000479820 QRICH2Q9H0J4 1663 aa22.11■■□□□ 1.13
SEMA6C-206ENST00000479820 PSME1Q06323 249 aa22.11■■□□□ 1.13
SEMA6C-206ENST00000479820 TRPC5Q9UL62 973 aaPredicted RBP22.1■■□□□ 1.13
SEMA6C-206ENST00000479820 NRAPQ86VF7 1730 aa22.09■■□□□ 1.13
SEMA6C-206ENST00000479820 GLI3P10071 1580 aa22.08■■□□□ 1.12
SEMA6C-206ENST00000479820 NBPF1Q3BBV0 1214 aa22.07■■□□□ 1.12
SEMA6C-206ENST00000479820 PMFBP1Q8TBY8 1022 aa22.07■■□□□ 1.12
SEMA6C-206ENST00000479820 UPF1Q92900 1129 aaKnown RBP eCLIP22.07■■□□□ 1.12
SEMA6C-206ENST00000479820 L3MBTL2Q969R5 705 aa22.05■■□□□ 1.12
SEMA6C-206ENST00000479820 EP400Q96L91 3159 aa22.05■■□□□ 1.12
SEMA6C-206ENST00000479820 GPRASP1Q5JY77 1395 aa22.04■■□□□ 1.12
SEMA6C-206ENST00000479820 PHRF1Q9P1Y6 1649 aaKnown RBP22.04■■□□□ 1.12
SEMA6C-206ENST00000479820 COL14A1Q05707 1796 aaKnown RBP22.04■■□□□ 1.12
SEMA6C-206ENST00000479820 POLR3AO14802 1390 aaPredicted RBP22.03■■□□□ 1.12
SEMA6C-206ENST00000479820 BRWD3Q6RI45 1802 aa22.03■■□□□ 1.12
SEMA6C-206ENST00000479820 NUDT16Q96DE0 195 aaKnown RBP22.02■■□□□ 1.12
SEMA6C-206ENST00000479820 SIN3AQ96ST3 1273 aa22.01■■□□□ 1.11
SEMA6C-206ENST00000479820 RALGAPBQ86X10 1494 aa22.01■■□□□ 1.11
SEMA6C-206ENST00000479820 UNC5CLQ8IV45 518 aa22■■□□□ 1.11
SEMA6C-206ENST00000479820 CABLES1Q8TDN4 633 aa21.99■■□□□ 1.11
SEMA6C-206ENST00000479820 CDK19Q9BWU1 502 aa21.99■■□□□ 1.11
SEMA6C-206ENST00000479820 CENPJQ9HC77 1338 aaPredicted RBP21.99■■□□□ 1.11
SEMA6C-206ENST00000479820 NGDNQ8NEJ9 315 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms