RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 SAFB2Q14151 953 aaKnown RBP eCLIP16.46■□□□□ 0.23
TM9SF4-206ENST00000479591 AMOTL2Q9Y2J4 779 aa16.46■□□□□ 0.23
TM9SF4-206ENST00000479591 CHD2O14647 1828 aaKnown RBP16.46■□□□□ 0.23
TM9SF4-206ENST00000479591 WAPLQ7Z5K2 1190 aa16.45■□□□□ 0.22
TM9SF4-206ENST00000479591 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
TM9SF4-206ENST00000479591 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
TM9SF4-206ENST00000479591 PLEKHH1Q9ULM0 1364 aa16.45■□□□□ 0.22
TM9SF4-206ENST00000479591 MINK1Q8N4C8 1332 aaPredicted RBP16.45■□□□□ 0.22
TM9SF4-206ENST00000479591 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
TM9SF4-206ENST00000479591 ADGRB2O60241 1585 aa16.43■□□□□ 0.22
TM9SF4-206ENST00000479591 ATAD2Q6PL18 1390 aa16.43■□□□□ 0.22
TM9SF4-206ENST00000479591 NINLQ9Y2I6 1382 aa16.43■□□□□ 0.22
TM9SF4-206ENST00000479591 PANK3Q9H999 370 aa16.42■□□□□ 0.22
TM9SF4-206ENST00000479591 SRPK2P78362 688 aaKnown RBP16.41■□□□□ 0.22
TM9SF4-206ENST00000479591 NWD1Q149M9 1564 aa16.41■□□□□ 0.22
TM9SF4-206ENST00000479591 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.4■□□□□ 0.22
TM9SF4-206ENST00000479591 CDK19Q9BWU1 502 aa16.4■□□□□ 0.22
TM9SF4-206ENST00000479591 WASLO00401 505 aaPredicted RBP16.39■□□□□ 0.21
TM9SF4-206ENST00000479591 PER1O15534 1290 aaPredicted RBP16.39■□□□□ 0.21
TM9SF4-206ENST00000479591 CABP2Q9NPB3 220 aa16.39■□□□□ 0.21
TM9SF4-206ENST00000479591 KTN1Q86UP2 1357 aaKnown RBP16.38■□□□□ 0.21
TM9SF4-206ENST00000479591 CCER2I3L3R5 266 aa16.38■□□□□ 0.21
TM9SF4-206ENST00000479591 KCNA6P17658 529 aa16.38■□□□□ 0.21
TM9SF4-206ENST00000479591 HSPA2P54652 639 aa16.38■□□□□ 0.21
TM9SF4-206ENST00000479591 PRKRIP1Q9H875 184 aaPredicted RBP16.38■□□□□ 0.21
TM9SF4-206ENST00000479591 STRCQ7RTU9 1775 aa16.36■□□□□ 0.21
TM9SF4-206ENST00000479591 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
TM9SF4-206ENST00000479591 KNSTRNQ9Y448 316 aa16.35■□□□□ 0.21
TM9SF4-206ENST00000479591 ANKRD36BQ8N2N9 1353 aa16.35■□□□□ 0.21
TM9SF4-206ENST00000479591 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
TM9SF4-206ENST00000479591 SLC12A5Q9H2X9 1139 aa16.34■□□□□ 0.21
TM9SF4-206ENST00000479591 NPC1L1Q9UHC9 1359 aa16.34■□□□□ 0.21
TM9SF4-206ENST00000479591 RALBP1Q15311 655 aa16.33■□□□□ 0.2
TM9SF4-206ENST00000479591 ATP7BP35670 1465 aa16.32■□□□□ 0.2
TM9SF4-206ENST00000479591 USP32Q8NFA0 1604 aa16.32■□□□□ 0.2
TM9SF4-206ENST00000479591 TERF2IPQ9NYB0 399 aa16.31■□□□□ 0.2
TM9SF4-206ENST00000479591 NALCNQ8IZF0 1738 aa16.31■□□□□ 0.2
TM9SF4-206ENST00000479591 CDC42BPGQ6DT37 1551 aa16.3■□□□□ 0.2
TM9SF4-206ENST00000479591 PARD3Q8TEW0 1356 aa16.3■□□□□ 0.2
TM9SF4-206ENST00000479591 NUDT16Q96DE0 195 aaKnown RBP16.3■□□□□ 0.2
TM9SF4-206ENST00000479591 CCDC61Q9Y6R9 512 aa16.3■□□□□ 0.2
TM9SF4-206ENST00000479591 ITSN1Q15811 1721 aa16.3■□□□□ 0.2
TM9SF4-206ENST00000479591 TOPAZ1Q8N9V7 1692 aa16.3■□□□□ 0.2
TM9SF4-206ENST00000479591 PPIP5K1Q6PFW1 1433 aa16.29■□□□□ 0.2
TM9SF4-206ENST00000479591 NSD3Q9BZ95 1437 aa16.29■□□□□ 0.2
TM9SF4-206ENST00000479591 ADGRL3Q9HAR2 1447 aa16.29■□□□□ 0.2
TM9SF4-206ENST00000479591 FMN2Q9NZ56 1722 aa16.29■□□□□ 0.2
TM9SF4-206ENST00000479591 AMER1Q5JTC6 1135 aaPredicted RBP16.29■□□□□ 0.2
TM9SF4-206ENST00000479591 HDGFL2Q7Z4V5 671 aaPredicted RBP16.29■□□□□ 0.2
TM9SF4-206ENST00000479591 CARD14Q9BXL6 1004 aa16.29■□□□□ 0.2
TM9SF4-206ENST00000479591 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
TM9SF4-206ENST00000479591 ANKARQ7Z5J8 1434 aa16.28■□□□□ 0.2
TM9SF4-206ENST00000479591 A0A1W2PP64 1363 aa16.28■□□□□ 0.2
TM9SF4-206ENST00000479591 CABP1Q9NZU7 370 aa16.28■□□□□ 0.2
TM9SF4-206ENST00000479591 NCOA3Q9Y6Q9 1424 aa16.28■□□□□ 0.2
TM9SF4-206ENST00000479591 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
TM9SF4-206ENST00000479591 NSD2O96028 1365 aa16.26■□□□□ 0.19
TM9SF4-206ENST00000479591 STRCP1A6NGW2 1772 aa16.26■□□□□ 0.19
TM9SF4-206ENST00000479591 MYBBP1AQ9BQG0 1328 aaKnown RBP16.26■□□□□ 0.19
TM9SF4-206ENST00000479591 PRR36Q9H6K5 1346 aa16.26■□□□□ 0.19
TM9SF4-206ENST00000479591 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
TM9SF4-206ENST00000479591 CGNL1Q0VF96 1302 aa16.25■□□□□ 0.19
TM9SF4-206ENST00000479591 PROSER2Q86WR7 435 aaPredicted RBP16.25■□□□□ 0.19
TM9SF4-206ENST00000479591 CPSF1Q10570 1443 aaKnown RBP16.25■□□□□ 0.19
TM9SF4-206ENST00000479591 AKAP12Q02952 1782 aa16.25■□□□□ 0.19
TM9SF4-206ENST00000479591 PLEKHG3A1L390 1219 aa16.24■□□□□ 0.19
TM9SF4-206ENST00000479591 CNGB1Q14028 1251 aaPredicted RBP16.24■□□□□ 0.19
TM9SF4-206ENST00000479591 MON2Q7Z3U7 1717 aa16.23■□□□□ 0.19
TM9SF4-206ENST00000479591 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
TM9SF4-206ENST00000479591 C14orf37Q86TY3 774 aa16.22■□□□□ 0.19
TM9SF4-206ENST00000479591 BRD4O60885 1362 aaPredicted RBP16.22■□□□□ 0.19
TM9SF4-206ENST00000479591 EDC4Q6P2E9 1401 aaKnown RBP16.21■□□□□ 0.19
TM9SF4-206ENST00000479591 NLRP13Q86W25 1043 aa16.21■□□□□ 0.19
TM9SF4-206ENST00000479591 RGPD8O14715 1765 aaPredicted RBP16.21■□□□□ 0.18
TM9SF4-206ENST00000479591 DCCP43146 1447 aa16.2■□□□□ 0.18
TM9SF4-206ENST00000479591 ANKRD26Q9UPS8 1709 aa16.2■□□□□ 0.18
TM9SF4-206ENST00000479591 KIF20BQ96Q89 1820 aa16.2■□□□□ 0.18
TM9SF4-206ENST00000479591 MRS2Q9HD23 443 aa16.2■□□□□ 0.18
TM9SF4-206ENST00000479591 TMEM94Q12767 1356 aa16.2■□□□□ 0.18
TM9SF4-206ENST00000479591 NUTM2FA1L443 756 aa16.19■□□□□ 0.18
TM9SF4-206ENST00000479591 C19orf44Q9H6X5 657 aa16.19■□□□□ 0.18
TM9SF4-206ENST00000479591 POLR3AO14802 1390 aaPredicted RBP16.18■□□□□ 0.18
TM9SF4-206ENST00000479591 RBM33Q96EV2 1170 aaKnown RBP16.18■□□□□ 0.18
TM9SF4-206ENST00000479591 ACEP12821 1306 aa16.18■□□□□ 0.18
TM9SF4-206ENST00000479591 FBXO41Q8TF61 875 aa16.17■□□□□ 0.18
TM9SF4-206ENST00000479591 NRKQ7Z2Y5 1582 aa16.17■□□□□ 0.18
TM9SF4-206ENST00000479591 PPP2R1AP30153 589 aa16.16■□□□□ 0.18
TM9SF4-206ENST00000479591 MORC1Q86VD1 984 aa16.16■□□□□ 0.18
TM9SF4-206ENST00000479591 LRRC7Q96NW7 1537 aa16.15■□□□□ 0.18
TM9SF4-206ENST00000479591 XIRP1Q702N8 1843 aaKnown RBP16.15■□□□□ 0.18
TM9SF4-206ENST00000479591 FYB1O15117 783 aa16.15■□□□□ 0.18
TM9SF4-206ENST00000479591 USP6P35125 1406 aa16.15■□□□□ 0.18
TM9SF4-206ENST00000479591 CCDC184Q52MB2 194 aa16.15■□□□□ 0.18
TM9SF4-206ENST00000479591 ZNF335Q9H4Z2 1342 aaPredicted RBP16.15■□□□□ 0.18
TM9SF4-206ENST00000479591 MSH6P52701 1360 aa16.14■□□□□ 0.17
TM9SF4-206ENST00000479591 ATF3P18847 181 aa16.14■□□□□ 0.17
TM9SF4-206ENST00000479591 NGDNQ8NEJ9 315 aaKnown RBP16.14■□□□□ 0.17
TM9SF4-206ENST00000479591 PMFBP1Q8TBY8 1022 aa16.13■□□□□ 0.17
TM9SF4-206ENST00000479591 PHF23Q9BUL5 403 aaPredicted RBP16.13■□□□□ 0.17
TM9SF4-206ENST00000479591 PHF8Q9UPP1 1060 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms