RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ABCC11Q96J66 1382 aa21.13■□□□□ 0.97
ATG4B-218ENST00000479554 TMEM132EQ6IEE7 984 aa21.13■□□□□ 0.97
ATG4B-218ENST00000479554 ORAI2Q96SN7 254 aa21.13■□□□□ 0.97
ATG4B-218ENST00000479554 NRXN1Q9ULB1 1477 aa21.13■□□□□ 0.97
ATG4B-218ENST00000479554 YTHDC2Q9H6S0 1430 aaKnown RBP21.12■□□□□ 0.97
ATG4B-218ENST00000479554 PNPLA6Q8IY17 1366 aa21.12■□□□□ 0.97
ATG4B-218ENST00000479554 ZNF772Q68DY9 489 aaPredicted RBP21.12■□□□□ 0.97
ATG4B-218ENST00000479554 WAPLQ7Z5K2 1190 aa21.1■□□□□ 0.97
ATG4B-218ENST00000479554 PLEKHH1Q9ULM0 1364 aa21.09■□□□□ 0.97
ATG4B-218ENST00000479554 SOS2Q07890 1332 aaPredicted RBP21.08■□□□□ 0.97
ATG4B-218ENST00000479554 C14orf93Q9H972 538 aaKnown RBP21.08■□□□□ 0.97
ATG4B-218ENST00000479554 HRCP23327 699 aa21.06■□□□□ 0.96
ATG4B-218ENST00000479554 ESCO1Q5FWF5 840 aa21.06■□□□□ 0.96
ATG4B-218ENST00000479554 CFAP70Q5T0N1 1121 aa21.06■□□□□ 0.96
ATG4B-218ENST00000479554 DHX57Q6P158 1386 aaKnown RBP21.06■□□□□ 0.96
ATG4B-218ENST00000479554 FMN2Q9NZ56 1722 aa21.05■□□□□ 0.96
ATG4B-218ENST00000479554 AFF2P51816 1311 aa21.04■□□□□ 0.96
ATG4B-218ENST00000479554 NPHP3Q7Z494 1330 aa21.04■□□□□ 0.96
ATG4B-218ENST00000479554 NUTM2FA1L443 756 aa21.03■□□□□ 0.96
ATG4B-218ENST00000479554 SIRT1Q96EB6 747 aa21.03■□□□□ 0.96
ATG4B-218ENST00000479554 C8orf37Q96NL8 207 aa21.03■□□□□ 0.96
ATG4B-218ENST00000479554 PXDNQ92626 1479 aa21.01■□□□□ 0.95
ATG4B-218ENST00000479554 COL22A1Q8NFW1 1626 aaPredicted RBP21.01■□□□□ 0.95
ATG4B-218ENST00000479554 DLC1Q96QB1 1528 aa21■□□□□ 0.95
ATG4B-218ENST00000479554 KIF1AQ12756 1690 aa21■□□□□ 0.95
ATG4B-218ENST00000479554 ADGRB1O14514 1584 aa20.99■□□□□ 0.95
ATG4B-218ENST00000479554 ADAMTS2O95450 1211 aa20.99■□□□□ 0.95
ATG4B-218ENST00000479554 FOXO3O43524 673 aa20.98■□□□□ 0.95
ATG4B-218ENST00000479554 RXRBP28702 533 aa20.98■□□□□ 0.95
ATG4B-218ENST00000479554 PRAM1Q96QH2 718 aa20.98■□□□□ 0.95
ATG4B-218ENST00000479554 XPCQ01831 940 aaPredicted RBP20.97■□□□□ 0.95
ATG4B-218ENST00000479554 DCAF11Q8TEB1 546 aa20.97■□□□□ 0.95
ATG4B-218ENST00000479554 KDM2AQ9Y2K7 1162 aa20.97■□□□□ 0.95
ATG4B-218ENST00000479554 CDK12Q9NYV4 1490 aaPredicted RBP20.96■□□□□ 0.95
ATG4B-218ENST00000479554 SAFB2Q14151 953 aaKnown RBP eCLIP20.96■□□□□ 0.95
ATG4B-218ENST00000479554 NGLY1Q96IV0 654 aa20.95■□□□□ 0.94
ATG4B-218ENST00000479554 POGKQ9P215 609 aa20.95■□□□□ 0.94
ATG4B-218ENST00000479554 STAC3Q96MF2 364 aa20.94■□□□□ 0.94
ATG4B-218ENST00000479554 ADGRB2O60241 1585 aa20.93■□□□□ 0.94
ATG4B-218ENST00000479554 QTRT2Q9H974 415 aaKnown RBP20.92■□□□□ 0.94
ATG4B-218ENST00000479554 TRAK1Q9UPV9 953 aa20.92■□□□□ 0.94
ATG4B-218ENST00000479554 RGPD8O14715 1765 aaPredicted RBP20.92■□□□□ 0.94
ATG4B-218ENST00000479554 PHF8Q9UPP1 1060 aa20.9■□□□□ 0.94
ATG4B-218ENST00000479554 ANKARQ7Z5J8 1434 aa20.89■□□□□ 0.94
ATG4B-218ENST00000479554 RBM6P78332 1123 aaKnown RBP20.89■□□□□ 0.93
ATG4B-218ENST00000479554 MARF1Q9Y4F3 1742 aaKnown RBP20.89■□□□□ 0.93
ATG4B-218ENST00000479554 RGS12O14924 1447 aa20.88■□□□□ 0.93
ATG4B-218ENST00000479554 SPATA31A3Q5VYP0 1347 aa20.88■□□□□ 0.93
ATG4B-218ENST00000479554 KRT28Q7Z3Y7 464 aa20.88■□□□□ 0.93
ATG4B-218ENST00000479554 USP21Q9UK80 565 aa20.88■□□□□ 0.93
ATG4B-218ENST00000479554 USP32Q8NFA0 1604 aa20.88■□□□□ 0.93
ATG4B-218ENST00000479554 FNBP4Q8N3X1 1017 aaPredicted RBP20.86■□□□□ 0.93
ATG4B-218ENST00000479554 HIRIP3Q9BW71 556 aaPredicted RBP20.86■□□□□ 0.93
ATG4B-218ENST00000479554 TNS3Q68CZ2 1445 aa20.86■□□□□ 0.93
ATG4B-218ENST00000479554 EIF3AQ14152 1382 aaKnown RBP20.85■□□□□ 0.93
ATG4B-218ENST00000479554 MINK1Q8N4C8 1332 aaPredicted RBP20.85■□□□□ 0.93
ATG4B-218ENST00000479554 ARHGEF28Q8N1W1 1705 aaKnown RBP20.85■□□□□ 0.93
ATG4B-218ENST00000479554 PSME1Q06323 249 aa20.85■□□□□ 0.93
ATG4B-218ENST00000479554 TRPC5Q9UL62 973 aaPredicted RBP20.85■□□□□ 0.93
ATG4B-218ENST00000479554 TULP4Q9NRJ4 1543 aa20.83■□□□□ 0.93
ATG4B-218ENST00000479554 UPF1Q92900 1129 aaKnown RBP eCLIP20.83■□□□□ 0.93
ATG4B-218ENST00000479554 ATRNO75882 1429 aa20.83■□□□□ 0.93
ATG4B-218ENST00000479554 SBNO1A3KN83 1393 aa20.83■□□□□ 0.92
ATG4B-218ENST00000479554 KIAA1210Q9ULL0 1709 aa20.81■□□□□ 0.92
ATG4B-218ENST00000479554 PMFBP1Q8TBY8 1022 aa20.81■□□□□ 0.92
ATG4B-218ENST00000479554 ARHGEF10O15013 1369 aa20.8■□□□□ 0.92
ATG4B-218ENST00000479554 BCL9LQ86UU0 1499 aa20.8■□□□□ 0.92
ATG4B-218ENST00000479554 WASLO00401 505 aaPredicted RBP20.79■□□□□ 0.92
ATG4B-218ENST00000479554 HAP1P54257 671 aaPredicted RBP20.79■□□□□ 0.92
ATG4B-218ENST00000479554 PRR36Q9H6K5 1346 aa20.78■□□□□ 0.92
ATG4B-218ENST00000479554 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.78■□□□□ 0.92
ATG4B-218ENST00000479554 LMOD2Q6P5Q4 547 aa20.78■□□□□ 0.92
ATG4B-218ENST00000479554 ABCA3Q99758 1704 aa20.78■□□□□ 0.92
ATG4B-218ENST00000479554 TRPM3Q9HCF6 1732 aaPredicted RBP20.77■□□□□ 0.92
ATG4B-218ENST00000479554 ITSN1Q15811 1721 aa20.76■□□□□ 0.91
ATG4B-218ENST00000479554 SLIT2O94813 1529 aa20.76■□□□□ 0.91
ATG4B-218ENST00000479554 GPRASP1Q5JY77 1395 aa20.75■□□□□ 0.91
ATG4B-218ENST00000479554 PLEKHG5O94827 1062 aa20.75■□□□□ 0.91
ATG4B-218ENST00000479554 ATP7BP35670 1465 aa20.75■□□□□ 0.91
ATG4B-218ENST00000479554 CABLES1Q8TDN4 633 aa20.74■□□□□ 0.91
ATG4B-218ENST00000479554 UNC5CLQ8IV45 518 aa20.73■□□□□ 0.91
ATG4B-218ENST00000479554 ALS2Q96Q42 1657 aa20.73■□□□□ 0.91
ATG4B-218ENST00000479554 ATAD2Q6PL18 1390 aa20.72■□□□□ 0.91
ATG4B-218ENST00000479554 NGDNQ8NEJ9 315 aaKnown RBP20.72■□□□□ 0.91
ATG4B-218ENST00000479554 PLCH1Q4KWH8 1693 aa20.72■□□□□ 0.91
ATG4B-218ENST00000479554 GJD4Q96KN9 370 aaPredicted RBP20.71■□□□□ 0.91
ATG4B-218ENST00000479554 NBPF1Q3BBV0 1214 aa20.7■□□□□ 0.9
ATG4B-218ENST00000479554 NWD2Q9ULI1 1742 aa20.7■□□□□ 0.9
ATG4B-218ENST00000479554 RALGAPBQ86X10 1494 aa20.69■□□□□ 0.9
ATG4B-218ENST00000479554 EP400Q96L91 3159 aa20.69■□□□□ 0.9
ATG4B-218ENST00000479554 GLI3P10071 1580 aa20.69■□□□□ 0.9
ATG4B-218ENST00000479554 NUDT16Q96DE0 195 aaKnown RBP20.69■□□□□ 0.9
ATG4B-218ENST00000479554 TOPAZ1Q8N9V7 1692 aa20.68■□□□□ 0.9
ATG4B-218ENST00000479554 CDK19Q9BWU1 502 aa20.68■□□□□ 0.9
ATG4B-218ENST00000479554 PAK3O75914 559 aaPredicted RBP20.66■□□□□ 0.9
ATG4B-218ENST00000479554 L3MBTL2Q969R5 705 aa20.65■□□□□ 0.9
ATG4B-218ENST00000479554 CRYBG1Q9Y4K1 1723 aa20.64■□□□□ 0.9
ATG4B-218ENST00000479554 CENPJQ9HC77 1338 aaPredicted RBP20.64■□□□□ 0.89
ATG4B-218ENST00000479554 SIN3AQ96ST3 1273 aa20.64■□□□□ 0.89
ATG4B-218ENST00000479554 QRICH2Q9H0J4 1663 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms