RNA–Protein interactions for RNA: ENST00000479488.1

GSE1-209, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-209ENST00000479488 ROCK2O75116 1388 aaKnown RBP22.07■■□□□ 1.12
GSE1-209ENST00000479488 PLEKHH1Q9ULM0 1364 aa22.07■■□□□ 1.12
GSE1-209ENST00000479488 NBPF1Q3BBV0 1214 aa22.06■■□□□ 1.12
GSE1-209ENST00000479488 ARHGEF28Q8N1W1 1705 aaKnown RBP22.06■■□□□ 1.12
GSE1-209ENST00000479488 ROBO1Q9Y6N7 1651 aa22.04■■□□□ 1.12
GSE1-209ENST00000479488 CDC42BPGQ6DT37 1551 aa22.04■■□□□ 1.12
GSE1-209ENST00000479488 SLAIN2Q9P270 581 aa22.03■■□□□ 1.12
GSE1-209ENST00000479488 NBPF8Q3BBV2 869 aa22.02■■□□□ 1.12
GSE1-209ENST00000479488 SIRT1Q96EB6 747 aa22.02■■□□□ 1.12
GSE1-209ENST00000479488 RALGAPBQ86X10 1494 aa22■■□□□ 1.11
GSE1-209ENST00000479488 MINK1Q8N4C8 1332 aaPredicted RBP21.99■■□□□ 1.11
GSE1-209ENST00000479488 MST1RQ04912 1400 aa21.98■■□□□ 1.11
GSE1-209ENST00000479488 TIMELESSQ9UNS1 1208 aa21.98■■□□□ 1.11
GSE1-209ENST00000479488 NUTM2FA1L443 756 aa21.97■■□□□ 1.11
GSE1-209ENST00000479488 CARD11Q9BXL7 1154 aa21.97■■□□□ 1.11
GSE1-209ENST00000479488 EIF3AQ14152 1382 aaKnown RBP21.97■■□□□ 1.11
GSE1-209ENST00000479488 HIRIP3Q9BW71 556 aaPredicted RBP21.96■■□□□ 1.11
GSE1-209ENST00000479488 FMN2Q9NZ56 1722 aa21.96■■□□□ 1.11
GSE1-209ENST00000479488 ADGRB2O60241 1585 aa21.95■■□□□ 1.1
GSE1-209ENST00000479488 QRICH2Q9H0J4 1663 aa21.95■■□□□ 1.1
GSE1-209ENST00000479488 HSPA1LP34931 641 aa21.94■■□□□ 1.1
GSE1-209ENST00000479488 CENPJQ9HC77 1338 aaPredicted RBP21.94■■□□□ 1.1
GSE1-209ENST00000479488 C1orf167Q5SNV9 1468 aa21.94■■□□□ 1.1
GSE1-209ENST00000479488 PHLPP1O60346 1717 aa21.92■■□□□ 1.1
GSE1-209ENST00000479488 GPRASP1Q5JY77 1395 aa21.91■■□□□ 1.1
GSE1-209ENST00000479488 BRINP3Q76B58 766 aa21.91■■□□□ 1.1
GSE1-209ENST00000479488 ESCO1Q5FWF5 840 aa21.89■■□□□ 1.09
GSE1-209ENST00000479488 ORAI2Q96SN7 254 aa21.87■■□□□ 1.09
GSE1-209ENST00000479488 WASLO00401 505 aaPredicted RBP21.86■■□□□ 1.09
GSE1-209ENST00000479488 AHDC1Q5TGY3 1603 aaPredicted RBP21.86■■□□□ 1.09
GSE1-209ENST00000479488 RGPD8O14715 1765 aaPredicted RBP21.86■■□□□ 1.09
GSE1-209ENST00000479488 TULP4Q9NRJ4 1543 aa21.85■■□□□ 1.09
GSE1-209ENST00000479488 KIF1AQ12756 1690 aa21.85■■□□□ 1.09
GSE1-209ENST00000479488 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
GSE1-209ENST00000479488 ANKARQ7Z5J8 1434 aa21.84■■□□□ 1.09
GSE1-209ENST00000479488 ITSN1Q15811 1721 aa21.83■■□□□ 1.08
GSE1-209ENST00000479488 SRPK2P78362 688 aaKnown RBP21.82■■□□□ 1.08
GSE1-209ENST00000479488 COL16A1Q07092 1604 aaPredicted RBP21.81■■□□□ 1.08
GSE1-209ENST00000479488 USP32Q8NFA0 1604 aa21.81■■□□□ 1.08
GSE1-209ENST00000479488 DDX17Q92841 729 aaKnown RBP21.81■■□□□ 1.08
GSE1-209ENST00000479488 CDK19Q9BWU1 502 aa21.8■■□□□ 1.08
GSE1-209ENST00000479488 NPHP3Q7Z494 1330 aa21.8■■□□□ 1.08
GSE1-209ENST00000479488 USP47Q96K76 1375 aa21.79■■□□□ 1.08
GSE1-209ENST00000479488 PHF8Q9UPP1 1060 aa21.79■■□□□ 1.08
GSE1-209ENST00000479488 EVC2Q86UK5 1308 aa21.79■■□□□ 1.08
GSE1-209ENST00000479488 ATP7BP35670 1465 aa21.77■■□□□ 1.08
GSE1-209ENST00000479488 FOXO3O43524 673 aa21.77■■□□□ 1.08
GSE1-209ENST00000479488 XPCQ01831 940 aaPredicted RBP21.76■■□□□ 1.07
GSE1-209ENST00000479488 PMFBP1Q8TBY8 1022 aa21.76■■□□□ 1.07
GSE1-209ENST00000479488 PRR36Q9H6K5 1346 aa21.76■■□□□ 1.07
GSE1-209ENST00000479488 NUDT16Q96DE0 195 aaKnown RBP21.75■■□□□ 1.07
GSE1-209ENST00000479488 CABP2Q9NPB3 220 aa21.75■■□□□ 1.07
GSE1-209ENST00000479488 JCADQ9P266 1359 aa21.74■■□□□ 1.07
GSE1-209ENST00000479488 SBNO2Q9Y2G9 1366 aa21.74■■□□□ 1.07
GSE1-209ENST00000479488 TOPAZ1Q8N9V7 1692 aa21.73■■□□□ 1.07
GSE1-209ENST00000479488 ST20-MTHFSA0A0A6YYL1 179 aa21.73■■□□□ 1.07
GSE1-209ENST00000479488 NGDNQ8NEJ9 315 aaKnown RBP21.73■■□□□ 1.07
GSE1-209ENST00000479488 LRRC59Q96AG4 307 aaKnown RBP21.72■■□□□ 1.07
GSE1-209ENST00000479488 PSME1Q06323 249 aa21.71■■□□□ 1.07
GSE1-209ENST00000479488 SHPRHQ149N8 1683 aa21.71■■□□□ 1.07
GSE1-209ENST00000479488 CCDC61Q9Y6R9 512 aa21.7■■□□□ 1.06
GSE1-209ENST00000479488 SOS2Q07890 1332 aaPredicted RBP21.7■■□□□ 1.06
GSE1-209ENST00000479488 PPIP5K1Q6PFW1 1433 aa21.7■■□□□ 1.06
GSE1-209ENST00000479488 PXDNQ92626 1479 aa21.7■■□□□ 1.06
GSE1-209ENST00000479488 KRT28Q7Z3Y7 464 aa21.68■■□□□ 1.06
GSE1-209ENST00000479488 MED1Q15648 1581 aaPredicted RBP21.67■■□□□ 1.06
GSE1-209ENST00000479488 ATAD2Q6PL18 1390 aa21.67■■□□□ 1.06
GSE1-209ENST00000479488 LMOD2Q6P5Q4 547 aa21.67■■□□□ 1.06
GSE1-209ENST00000479488 SLC24A1O60721 1099 aa21.66■■□□□ 1.06
GSE1-209ENST00000479488 PNPLA6Q8IY17 1366 aa21.65■■□□□ 1.06
GSE1-209ENST00000479488 EIF4G2P78344 907 aaKnown RBP eCLIP21.65■■□□□ 1.06
GSE1-209ENST00000479488 NUTM2BA6NNL0 878 aaPredicted RBP21.64■■□□□ 1.05
GSE1-209ENST00000479488 NUTM2EB1AL46 878 aaPredicted RBP21.64■■□□□ 1.05
GSE1-209ENST00000479488 TMF1P82094 1093 aa21.64■■□□□ 1.05
GSE1-209ENST00000479488 NUTM2AQ8IVF1 878 aaPredicted RBP21.64■■□□□ 1.05
GSE1-209ENST00000479488 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
GSE1-209ENST00000479488 SPATA31A6Q5VVP1 1343 aa21.63■■□□□ 1.05
GSE1-209ENST00000479488 PAK3O75914 559 aaPredicted RBP21.63■■□□□ 1.05
GSE1-209ENST00000479488 MEX3CQ5U5Q3 659 aaKnown RBP21.63■■□□□ 1.05
GSE1-209ENST00000479488 TESK2Q96S53 571 aa21.63■■□□□ 1.05
GSE1-209ENST00000479488 ACEP12821 1306 aa21.62■■□□□ 1.05
GSE1-209ENST00000479488 PLEKHG5O94827 1062 aa21.62■■□□□ 1.05
GSE1-209ENST00000479488 TMC1Q8TDI8 760 aa21.62■■□□□ 1.05
GSE1-209ENST00000479488 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
GSE1-209ENST00000479488 CABP1Q9NZU7 370 aa21.62■■□□□ 1.05
GSE1-209ENST00000479488 SPATA31A3Q5VYP0 1347 aa21.6■■□□□ 1.05
GSE1-209ENST00000479488 TRPM3Q9HCF6 1732 aaPredicted RBP21.6■■□□□ 1.05
GSE1-209ENST00000479488 SBNO1A3KN83 1393 aa21.6■■□□□ 1.05
GSE1-209ENST00000479488 POLR3AO14802 1390 aaPredicted RBP21.6■■□□□ 1.05
GSE1-209ENST00000479488 PLEKHG3A1L390 1219 aa21.59■■□□□ 1.05
GSE1-209ENST00000479488 HSPA5P11021 654 aaKnown RBP21.59■■□□□ 1.05
GSE1-209ENST00000479488 HAP1P54257 671 aaPredicted RBP21.59■■□□□ 1.05
GSE1-209ENST00000479488 ARHGEF10O15013 1369 aa21.59■■□□□ 1.05
GSE1-209ENST00000479488 DISP3Q9P2K9 1392 aa21.59■■□□□ 1.05
GSE1-209ENST00000479488 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.04
GSE1-209ENST00000479488 CDCA8Q53HL2 280 aa21.57■■□□□ 1.04
GSE1-209ENST00000479488 POLR3GLQ9BT43 218 aa21.57■■□□□ 1.04
GSE1-209ENST00000479488 LRP6O75581 1613 aa21.56■■□□□ 1.04
GSE1-209ENST00000479488 AKAP12Q02952 1782 aa21.55■■□□□ 1.04
GSE1-209ENST00000479488 ALS2Q96Q42 1657 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms