RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 RGS12O14924 1447 aa21.28■■□□□ 1
C9orf85-205ENST00000479413 NPHP3Q7Z494 1330 aa21.28■■□□□ 1
C9orf85-205ENST00000479413 RGL3Q3MIN7 710 aa21.27■■□□□ 1
C9orf85-205ENST00000479413 ESCO1Q5FWF5 840 aa21.27■■□□□ 1
C9orf85-205ENST00000479413 ADGRF5Q8IZF2 1346 aa21.27■□□□□ 0.99
C9orf85-205ENST00000479413 SPATA31E1Q6ZUB1 1445 aa21.26■□□□□ 0.99
C9orf85-205ENST00000479413 COL22A1Q8NFW1 1626 aaPredicted RBP21.26■□□□□ 0.99
C9orf85-205ENST00000479413 TECPR2O15040 1411 aa21.25■□□□□ 0.99
C9orf85-205ENST00000479413 MPHOSPH9Q99550 1183 aa21.25■□□□□ 0.99
C9orf85-205ENST00000479413 IFT172Q9UG01 1749 aa21.25■□□□□ 0.99
C9orf85-205ENST00000479413 STK26Q9P289 416 aa21.24■□□□□ 0.99
C9orf85-205ENST00000479413 USP21Q9UK80 565 aa21.24■□□□□ 0.99
C9orf85-205ENST00000479413 LRPPRCP42704 1394 aaKnown RBP21.23■□□□□ 0.99
C9orf85-205ENST00000479413 TRPC5Q9UL62 973 aaPredicted RBP21.22■□□□□ 0.99
C9orf85-205ENST00000479413 PIK3C2GO75747 1445 aa21.21■□□□□ 0.99
C9orf85-205ENST00000479413 KNDC1Q76NI1 1749 aa21.21■□□□□ 0.99
C9orf85-205ENST00000479413 PXDNQ92626 1479 aa21.21■□□□□ 0.99
C9orf85-205ENST00000479413 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
C9orf85-205ENST00000479413 ABCC11Q96J66 1382 aa21.21■□□□□ 0.99
C9orf85-205ENST00000479413 FOXO3O43524 673 aa21.2■□□□□ 0.98
C9orf85-205ENST00000479413 WAPLQ7Z5K2 1190 aa21.2■□□□□ 0.98
C9orf85-205ENST00000479413 FNBP4Q8N3X1 1017 aaPredicted RBP21.2■□□□□ 0.98
C9orf85-205ENST00000479413 MYOM2P54296 1465 aa21.2■□□□□ 0.98
C9orf85-205ENST00000479413 TMEM132EQ6IEE7 984 aa21.18■□□□□ 0.98
C9orf85-205ENST00000479413 ATAD2Q6PL18 1390 aa21.18■□□□□ 0.98
C9orf85-205ENST00000479413 NUTM2FA1L443 756 aa21.17■□□□□ 0.98
C9orf85-205ENST00000479413 XPCQ01831 940 aaPredicted RBP21.17■□□□□ 0.98
C9orf85-205ENST00000479413 YTHDC2Q9H6S0 1430 aaKnown RBP21.17■□□□□ 0.98
C9orf85-205ENST00000479413 FMN2Q9NZ56 1722 aa21.15■□□□□ 0.98
C9orf85-205ENST00000479413 MARF1Q9Y4F3 1742 aaKnown RBP21.15■□□□□ 0.98
C9orf85-205ENST00000479413 KIF1AQ12756 1690 aa21.15■□□□□ 0.98
C9orf85-205ENST00000479413 ATRNO75882 1429 aa21.15■□□□□ 0.98
C9orf85-205ENST00000479413 PLEKHH1Q9ULM0 1364 aa21.15■□□□□ 0.98
C9orf85-205ENST00000479413 SIRT1Q96EB6 747 aa21.11■□□□□ 0.97
C9orf85-205ENST00000479413 BCL9LQ86UU0 1499 aa21.11■□□□□ 0.97
C9orf85-205ENST00000479413 C14orf93Q9H972 538 aaKnown RBP21.1■□□□□ 0.97
C9orf85-205ENST00000479413 DHX57Q6P158 1386 aaKnown RBP21.1■□□□□ 0.97
C9orf85-205ENST00000479413 NRXN1Q9ULB1 1477 aa21.09■□□□□ 0.97
C9orf85-205ENST00000479413 SPATA31A3Q5VYP0 1347 aa21.08■□□□□ 0.97
C9orf85-205ENST00000479413 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.07■□□□□ 0.96
C9orf85-205ENST00000479413 KRT28Q7Z3Y7 464 aa21.06■□□□□ 0.96
C9orf85-205ENST00000479413 GJD4Q96KN9 370 aaPredicted RBP21.06■□□□□ 0.96
C9orf85-205ENST00000479413 HAP1P54257 671 aaPredicted RBP21.05■□□□□ 0.96
C9orf85-205ENST00000479413 PSME1Q06323 249 aa21.05■□□□□ 0.96
C9orf85-205ENST00000479413 CFAP70Q5T0N1 1121 aa21.05■□□□□ 0.96
C9orf85-205ENST00000479413 PHF8Q9UPP1 1060 aa21.05■□□□□ 0.96
C9orf85-205ENST00000479413 USP32Q8NFA0 1604 aa21.04■□□□□ 0.96
C9orf85-205ENST00000479413 TNS3Q68CZ2 1445 aa21.04■□□□□ 0.96
C9orf85-205ENST00000479413 RGPD8O14715 1765 aaPredicted RBP21.03■□□□□ 0.96
C9orf85-205ENST00000479413 UNC5CLQ8IV45 518 aa21.03■□□□□ 0.96
C9orf85-205ENST00000479413 PRAM1Q96QH2 718 aa21.03■□□□□ 0.96
C9orf85-205ENST00000479413 SLIT2O94813 1529 aa21.03■□□□□ 0.96
C9orf85-205ENST00000479413 SAFB2Q14151 953 aaKnown RBP eCLIP21.02■□□□□ 0.96
C9orf85-205ENST00000479413 CCDC125Q86Z20 511 aa21.02■□□□□ 0.96
C9orf85-205ENST00000479413 POGKQ9P215 609 aa21.02■□□□□ 0.96
C9orf85-205ENST00000479413 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
C9orf85-205ENST00000479413 DLC1Q96QB1 1528 aa21.01■□□□□ 0.95
C9orf85-205ENST00000479413 RALGAPBQ86X10 1494 aa21■□□□□ 0.95
C9orf85-205ENST00000479413 SBNO1A3KN83 1393 aa20.99■□□□□ 0.95
C9orf85-205ENST00000479413 ARHGEF10O15013 1369 aa20.99■□□□□ 0.95
C9orf85-205ENST00000479413 ANKARQ7Z5J8 1434 aa20.98■□□□□ 0.95
C9orf85-205ENST00000479413 LMOD2Q6P5Q4 547 aa20.98■□□□□ 0.95
C9orf85-205ENST00000479413 ADGRB2O60241 1585 aa20.97■□□□□ 0.95
C9orf85-205ENST00000479413 GLI3P10071 1580 aa20.97■□□□□ 0.95
C9orf85-205ENST00000479413 EP400Q96L91 3159 aa20.97■□□□□ 0.95
C9orf85-205ENST00000479413 ZRANB1Q9UGI0 708 aa20.97■□□□□ 0.95
C9orf85-205ENST00000479413 CABLES1Q8TDN4 633 aa20.96■□□□□ 0.95
C9orf85-205ENST00000479413 ADGRB1O14514 1584 aa20.95■□□□□ 0.94
C9orf85-205ENST00000479413 PLEKHG5O94827 1062 aa20.95■□□□□ 0.94
C9orf85-205ENST00000479413 EIF3AQ14152 1382 aaKnown RBP20.95■□□□□ 0.94
C9orf85-205ENST00000479413 ABCA3Q99758 1704 aa20.95■□□□□ 0.94
C9orf85-205ENST00000479413 NWD2Q9ULI1 1742 aa20.95■□□□□ 0.94
C9orf85-205ENST00000479413 PLCH1Q4KWH8 1693 aa20.94■□□□□ 0.94
C9orf85-205ENST00000479413 PMFBP1Q8TBY8 1022 aa20.93■□□□□ 0.94
C9orf85-205ENST00000479413 TRAK1Q9UPV9 953 aa20.93■□□□□ 0.94
C9orf85-205ENST00000479413 CCDC9Q9Y3X0 531 aaKnown RBP20.93■□□□□ 0.94
C9orf85-205ENST00000479413 VPS72Q15906 364 aa20.92■□□□□ 0.94
C9orf85-205ENST00000479413 BLMP54132 1417 aaPredicted RBP20.91■□□□□ 0.94
C9orf85-205ENST00000479413 GPRASP1Q5JY77 1395 aa20.91■□□□□ 0.94
C9orf85-205ENST00000479413 HIRIP3Q9BW71 556 aaPredicted RBP20.91■□□□□ 0.94
C9orf85-205ENST00000479413 KDM2AQ9Y2K7 1162 aa20.91■□□□□ 0.94
C9orf85-205ENST00000479413 DCAF11Q8TEB1 546 aa20.9■□□□□ 0.94
C9orf85-205ENST00000479413 STAC3Q96MF2 364 aa20.9■□□□□ 0.94
C9orf85-205ENST00000479413 BRWD3Q6RI45 1802 aa20.9■□□□□ 0.94
C9orf85-205ENST00000479413 MINK1Q8N4C8 1332 aaPredicted RBP20.89■□□□□ 0.93
C9orf85-205ENST00000479413 SEPT12Q8IYM1 358 aa20.89■□□□□ 0.93
C9orf85-205ENST00000479413 TULP4Q9NRJ4 1543 aa20.88■□□□□ 0.93
C9orf85-205ENST00000479413 TRPM3Q9HCF6 1732 aaPredicted RBP20.88■□□□□ 0.93
C9orf85-205ENST00000479413 SF3B2Q13435 895 aaKnown RBP20.87■□□□□ 0.93
C9orf85-205ENST00000479413 FAM83GA6ND36 823 aa20.86■□□□□ 0.93
C9orf85-205ENST00000479413 SRCAPQ6ZRS2 3230 aa20.86■□□□□ 0.93
C9orf85-205ENST00000479413 WASLO00401 505 aaPredicted RBP20.85■□□□□ 0.93
C9orf85-205ENST00000479413 ALS2Q96Q42 1657 aa20.85■□□□□ 0.93
C9orf85-205ENST00000479413 A0A0G2JS52 829 aa20.84■□□□□ 0.93
C9orf85-205ENST00000479413 ONECUT3O60422 494 aaPredicted RBP20.84■□□□□ 0.93
C9orf85-205ENST00000479413 MYT1Q01538 1121 aa20.84■□□□□ 0.93
C9orf85-205ENST00000479413 KRT27Q7Z3Y8 459 aa20.84■□□□□ 0.93
C9orf85-205ENST00000479413 NGDNQ8NEJ9 315 aaKnown RBP20.84■□□□□ 0.93
C9orf85-205ENST00000479413 PRR36Q9H6K5 1346 aa20.83■□□□□ 0.93
C9orf85-205ENST00000479413 COL14A1Q05707 1796 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms