RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 PROSER2Q86WR7 435 aaPredicted RBP19.11■□□□□ 0.65
SMARCAL1-211ENST00000479008 TESK2Q96S53 571 aa19.11■□□□□ 0.65
SMARCAL1-211ENST00000479008 RBM33Q96EV2 1170 aaKnown RBP19.1■□□□□ 0.65
SMARCAL1-211ENST00000479008 ADGRB2O60241 1585 aa19.09■□□□□ 0.65
SMARCAL1-211ENST00000479008 TULP4Q9NRJ4 1543 aa19.08■□□□□ 0.64
SMARCAL1-211ENST00000479008 LRRC7Q96NW7 1537 aa19.07■□□□□ 0.64
SMARCAL1-211ENST00000479008 TMF1P82094 1093 aa19.07■□□□□ 0.64
SMARCAL1-211ENST00000479008 LTBP4Q8N2S1 1624 aa19.07■□□□□ 0.64
SMARCAL1-211ENST00000479008 TMEM94Q12767 1356 aa19.06■□□□□ 0.64
SMARCAL1-211ENST00000479008 DISP3Q9P2K9 1392 aa19.06■□□□□ 0.64
SMARCAL1-211ENST00000479008 ZNF316A6NFI3 1004 aaPredicted RBP19.06■□□□□ 0.64
SMARCAL1-211ENST00000479008 ADGRL3Q9HAR2 1447 aa19.06■□□□□ 0.64
SMARCAL1-211ENST00000479008 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
SMARCAL1-211ENST00000479008 C14orf37Q86TY3 774 aa19.05■□□□□ 0.64
SMARCAL1-211ENST00000479008 EVC2Q86UK5 1308 aa19.03■□□□□ 0.64
SMARCAL1-211ENST00000479008 CDC42BPGQ6DT37 1551 aa19.03■□□□□ 0.64
SMARCAL1-211ENST00000479008 NCOA3Q9Y6Q9 1424 aa19.03■□□□□ 0.64
SMARCAL1-211ENST00000479008 C11orf95C9JLR9 678 aaPredicted RBP19.03■□□□□ 0.64
SMARCAL1-211ENST00000479008 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
SMARCAL1-211ENST00000479008 WASLO00401 505 aaPredicted RBP19.01■□□□□ 0.63
SMARCAL1-211ENST00000479008 POLR3GLQ9BT43 218 aa19.01■□□□□ 0.63
SMARCAL1-211ENST00000479008 CDK19Q9BWU1 502 aa19.01■□□□□ 0.63
SMARCAL1-211ENST00000479008 KIF7Q2M1P5 1343 aa19■□□□□ 0.63
SMARCAL1-211ENST00000479008 RGPD8O14715 1765 aaPredicted RBP19■□□□□ 0.63
SMARCAL1-211ENST00000479008 CCDC7Q96M83 1385 aa18.99■□□□□ 0.63
SMARCAL1-211ENST00000479008 SRPK2P78362 688 aaKnown RBP18.99■□□□□ 0.63
SMARCAL1-211ENST00000479008 CDCA8Q53HL2 280 aa18.99■□□□□ 0.63
SMARCAL1-211ENST00000479008 CABP2Q9NPB3 220 aa18.99■□□□□ 0.63
SMARCAL1-211ENST00000479008 WASHC2AQ641Q2 1341 aa18.99■□□□□ 0.63
SMARCAL1-211ENST00000479008 MSH6P52701 1360 aa18.97■□□□□ 0.63
SMARCAL1-211ENST00000479008 USP32Q8NFA0 1604 aa18.97■□□□□ 0.63
SMARCAL1-211ENST00000479008 C19orf44Q9H6X5 657 aa18.97■□□□□ 0.63
SMARCAL1-211ENST00000479008 ITSN1Q15811 1721 aa18.97■□□□□ 0.63
SMARCAL1-211ENST00000479008 MYOM1P52179 1685 aa18.96■□□□□ 0.63
SMARCAL1-211ENST00000479008 DCCP43146 1447 aa18.95■□□□□ 0.62
SMARCAL1-211ENST00000479008 NUTM2FA1L443 756 aa18.95■□□□□ 0.62
SMARCAL1-211ENST00000479008 ATP7BP35670 1465 aa18.95■□□□□ 0.62
SMARCAL1-211ENST00000479008 TOPAZ1Q8N9V7 1692 aa18.95■□□□□ 0.62
SMARCAL1-211ENST00000479008 PUS7Q96PZ0 661 aaKnown RBP18.94■□□□□ 0.62
SMARCAL1-211ENST00000479008 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
SMARCAL1-211ENST00000479008 ATF3P18847 181 aa18.93■□□□□ 0.62
SMARCAL1-211ENST00000479008 PRR36Q9H6K5 1346 aa18.93■□□□□ 0.62
SMARCAL1-211ENST00000479008 NUDT16Q96DE0 195 aaKnown RBP18.92■□□□□ 0.62
SMARCAL1-211ENST00000479008 ANKARQ7Z5J8 1434 aa18.91■□□□□ 0.62
SMARCAL1-211ENST00000479008 CADPS2Q86UW7 1296 aa18.91■□□□□ 0.62
SMARCAL1-211ENST00000479008 MST1RQ04912 1400 aa18.9■□□□□ 0.62
SMARCAL1-211ENST00000479008 TMC1Q8TDI8 760 aa18.89■□□□□ 0.61
SMARCAL1-211ENST00000479008 PPIP5K1Q6PFW1 1433 aa18.89■□□□□ 0.61
SMARCAL1-211ENST00000479008 CCDC61Q9Y6R9 512 aa18.88■□□□□ 0.61
SMARCAL1-211ENST00000479008 C1orf167Q5SNV9 1468 aa18.87■□□□□ 0.61
SMARCAL1-211ENST00000479008 AKAP12Q02952 1782 aa18.86■□□□□ 0.61
SMARCAL1-211ENST00000479008 IQSEC2Q5JU85 1478 aa18.86■□□□□ 0.61
SMARCAL1-211ENST00000479008 NINLQ9Y2I6 1382 aa18.86■□□□□ 0.61
SMARCAL1-211ENST00000479008 DDX10Q13206 875 aaKnown RBP18.86■□□□□ 0.61
SMARCAL1-211ENST00000479008 SLC12A5Q9H2X9 1139 aa18.86■□□□□ 0.61
SMARCAL1-211ENST00000479008 CABP1Q9NZU7 370 aa18.86■□□□□ 0.61
SMARCAL1-211ENST00000479008 KIF1AQ12756 1690 aa18.85■□□□□ 0.61
SMARCAL1-211ENST00000479008 CERKQ8TCT0 537 aa18.84■□□□□ 0.61
SMARCAL1-211ENST00000479008 ESCO1Q5FWF5 840 aa18.83■□□□□ 0.6
SMARCAL1-211ENST00000479008 MON2Q7Z3U7 1717 aa18.83■□□□□ 0.6
SMARCAL1-211ENST00000479008 PMFBP1Q8TBY8 1022 aa18.82■□□□□ 0.6
SMARCAL1-211ENST00000479008 ORAI2Q96SN7 254 aa18.82■□□□□ 0.6
SMARCAL1-211ENST00000479008 CD163L1Q9NR16 1453 aa18.82■□□□□ 0.6
SMARCAL1-211ENST00000479008 PLEKHG3A1L390 1219 aa18.81■□□□□ 0.6
SMARCAL1-211ENST00000479008 PANK3Q9H999 370 aa18.81■□□□□ 0.6
SMARCAL1-211ENST00000479008 SLAIN2Q9P270 581 aa18.81■□□□□ 0.6
SMARCAL1-211ENST00000479008 PHF8Q9UPP1 1060 aa18.81■□□□□ 0.6
SMARCAL1-211ENST00000479008 ANKRD36BQ8N2N9 1353 aa18.81■□□□□ 0.6
SMARCAL1-211ENST00000479008 TERF2IPQ9NYB0 399 aa18.8■□□□□ 0.6
SMARCAL1-211ENST00000479008 A0A1W2PP64 1363 aa18.8■□□□□ 0.6
SMARCAL1-211ENST00000479008 ACEP12821 1306 aa18.79■□□□□ 0.6
SMARCAL1-211ENST00000479008 HDGFL2Q7Z4V5 671 aaPredicted RBP18.79■□□□□ 0.6
SMARCAL1-211ENST00000479008 CPSF1Q10570 1443 aaKnown RBP18.78■□□□□ 0.6
SMARCAL1-211ENST00000479008 NGDNQ8NEJ9 315 aaKnown RBP18.78■□□□□ 0.6
SMARCAL1-211ENST00000479008 ROBO1Q9Y6N7 1651 aa18.78■□□□□ 0.6
SMARCAL1-211ENST00000479008 POLR3AO14802 1390 aaPredicted RBP18.78■□□□□ 0.6
SMARCAL1-211ENST00000479008 TOM1O60784 492 aa18.76■□□□□ 0.59
SMARCAL1-211ENST00000479008 BRINP3Q76B58 766 aa18.76■□□□□ 0.59
SMARCAL1-211ENST00000479008 KTN1Q86UP2 1357 aaKnown RBP18.76■□□□□ 0.59
SMARCAL1-211ENST00000479008 NRKQ7Z2Y5 1582 aa18.76■□□□□ 0.59
SMARCAL1-211ENST00000479008 NSD3Q9BZ95 1437 aa18.75■□□□□ 0.59
SMARCAL1-211ENST00000479008 UBAP1LF5GYI3 381 aa18.75■□□□□ 0.59
SMARCAL1-211ENST00000479008 NHSL1Q5SYE7 1610 aa18.74■□□□□ 0.59
SMARCAL1-211ENST00000479008 ZNF692Q9BU19 519 aaPredicted RBP18.74■□□□□ 0.59
SMARCAL1-211ENST00000479008 CARD14Q9BXL6 1004 aa18.74■□□□□ 0.59
SMARCAL1-211ENST00000479008 KIF20BQ96Q89 1820 aa18.74■□□□□ 0.59
SMARCAL1-211ENST00000479008 USP6P35125 1406 aa18.74■□□□□ 0.59
SMARCAL1-211ENST00000479008 FOXO3O43524 673 aa18.73■□□□□ 0.59
SMARCAL1-211ENST00000479008 EDC4Q6P2E9 1401 aaKnown RBP18.72■□□□□ 0.59
SMARCAL1-211ENST00000479008 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
SMARCAL1-211ENST00000479008 PER1O15534 1290 aaPredicted RBP18.71■□□□□ 0.59
SMARCAL1-211ENST00000479008 PSME1Q06323 249 aa18.71■□□□□ 0.59
SMARCAL1-211ENST00000479008 NPHP3Q7Z494 1330 aa18.71■□□□□ 0.59
SMARCAL1-211ENST00000479008 PIP4K2BP78356 416 aa18.7■□□□□ 0.58
SMARCAL1-211ENST00000479008 XPCQ01831 940 aaPredicted RBP18.7■□□□□ 0.58
SMARCAL1-211ENST00000479008 DDX17Q92841 729 aaKnown RBP18.7■□□□□ 0.58
SMARCAL1-211ENST00000479008 KNSTRNQ9Y448 316 aa18.7■□□□□ 0.58
SMARCAL1-211ENST00000479008 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
SMARCAL1-211ENST00000479008 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
SMARCAL1-211ENST00000479008 SSH2Q76I76 1423 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms