RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 ATRNO75882 1429 aa12.08□□□□□ -0.48
VPS45-208ENST00000478999 COL22A1Q8NFW1 1626 aaPredicted RBP12.08□□□□□ -0.48
VPS45-208ENST00000478999 ROCK1Q13464 1354 aa12.07□□□□□ -0.48
VPS45-208ENST00000478999 HFM1A2PYH4 1435 aa12.07□□□□□ -0.48
VPS45-208ENST00000478999 CENPBP07199 599 aaPredicted RBP12.07□□□□□ -0.48
VPS45-208ENST00000478999 USP21Q9UK80 565 aa12.07□□□□□ -0.48
VPS45-208ENST00000478999 ADGRL3Q9HAR2 1447 aa12.06□□□□□ -0.48
VPS45-208ENST00000478999 TRPC5Q9UL62 973 aaPredicted RBP12.05□□□□□ -0.48
VPS45-208ENST00000478999 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
VPS45-208ENST00000478999 NUP155O75694 1391 aa12.05□□□□□ -0.48
VPS45-208ENST00000478999 PTCH1Q13635 1447 aa12.04□□□□□ -0.48
VPS45-208ENST00000478999 FNBP4Q8N3X1 1017 aaPredicted RBP12.04□□□□□ -0.48
VPS45-208ENST00000478999 CCDC125Q86Z20 511 aa12.03□□□□□ -0.48
VPS45-208ENST00000478999 C1orf167Q5SNV9 1468 aa12.02□□□□□ -0.48
VPS45-208ENST00000478999 METP08581 1390 aa12.02□□□□□ -0.49
VPS45-208ENST00000478999 BCL9LQ86UU0 1499 aa12.02□□□□□ -0.49
VPS45-208ENST00000478999 GLI3P10071 1580 aa12.01□□□□□ -0.49
VPS45-208ENST00000478999 SOS2Q07890 1332 aaPredicted RBP12.01□□□□□ -0.49
VPS45-208ENST00000478999 MYOM2P54296 1465 aa12□□□□□ -0.49
VPS45-208ENST00000478999 ZNF326Q5BKZ1 582 aaKnown RBP11.99□□□□□ -0.49
VPS45-208ENST00000478999 BLMP54132 1417 aaPredicted RBP11.99□□□□□ -0.49
VPS45-208ENST00000478999 CLTCL1P53675 1640 aa11.99□□□□□ -0.49
VPS45-208ENST00000478999 DEFB132Q7Z7B7 95 aa11.98□□□□□ -0.49
VPS45-208ENST00000478999 NAIPQ13075 1403 aa11.97□□□□□ -0.49
VPS45-208ENST00000478999 ORAI2Q96SN7 254 aa11.97□□□□□ -0.49
VPS45-208ENST00000478999 GJD4Q96KN9 370 aaPredicted RBP11.96□□□□□ -0.49
VPS45-208ENST00000478999 NEXMIFQ5QGS0 1516 aa11.96□□□□□ -0.5
VPS45-208ENST00000478999 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
VPS45-208ENST00000478999 PPLO60437 1756 aa11.95□□□□□ -0.5
VPS45-208ENST00000478999 PXDNQ92626 1479 aa11.95□□□□□ -0.5
VPS45-208ENST00000478999 SLIT2O94813 1529 aa11.92□□□□□ -0.5
VPS45-208ENST00000478999 PLCH1Q4KWH8 1693 aa11.92□□□□□ -0.5
VPS45-208ENST00000478999 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
VPS45-208ENST00000478999 USP32Q8NFA0 1604 aa11.91□□□□□ -0.5
VPS45-208ENST00000478999 PSDA5PKW4 1024 aaPredicted RBP11.91□□□□□ -0.5
VPS45-208ENST00000478999 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
VPS45-208ENST00000478999 CDC42BPGQ6DT37 1551 aa11.9□□□□□ -0.5
VPS45-208ENST00000478999 NWD2Q9ULI1 1742 aa11.9□□□□□ -0.5
VPS45-208ENST00000478999 ABCA3Q99758 1704 aa11.89□□□□□ -0.51
VPS45-208ENST00000478999 SF3B2Q13435 895 aaKnown RBP11.89□□□□□ -0.51
VPS45-208ENST00000478999 UNC5CLQ8IV45 518 aa11.89□□□□□ -0.51
VPS45-208ENST00000478999 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
VPS45-208ENST00000478999 NPHP3Q7Z494 1330 aa11.88□□□□□ -0.51
VPS45-208ENST00000478999 PRAG1Q86YV5 1406 aa11.88□□□□□ -0.51
VPS45-208ENST00000478999 XPCQ01831 940 aaPredicted RBP11.88□□□□□ -0.51
VPS45-208ENST00000478999 SLC4A1APQ9BWU0 796 aaKnown RBP11.88□□□□□ -0.51
VPS45-208ENST00000478999 IFT172Q9UG01 1749 aa11.88□□□□□ -0.51
VPS45-208ENST00000478999 TNS1Q9HBL0 1735 aaKnown RBP11.87□□□□□ -0.51
VPS45-208ENST00000478999 MIER1Q8N108 512 aa11.87□□□□□ -0.51
VPS45-208ENST00000478999 RGPD8O14715 1765 aaPredicted RBP11.87□□□□□ -0.51
VPS45-208ENST00000478999 SEPT12Q8IYM1 358 aa11.86□□□□□ -0.51
VPS45-208ENST00000478999 TONSLQ96HA7 1378 aa11.86□□□□□ -0.51
VPS45-208ENST00000478999 NRAPQ86VF7 1730 aa11.86□□□□□ -0.51
VPS45-208ENST00000478999 FOXO3O43524 673 aa11.85□□□□□ -0.51
VPS45-208ENST00000478999 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
VPS45-208ENST00000478999 KIF1AQ12756 1690 aa11.84□□□□□ -0.51
VPS45-208ENST00000478999 FMN2Q9NZ56 1722 aa11.84□□□□□ -0.51
VPS45-208ENST00000478999 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
VPS45-208ENST00000478999 BAG6P46379 1132 aa11.83□□□□□ -0.52
VPS45-208ENST00000478999 KRT27Q7Z3Y8 459 aa11.83□□□□□ -0.52
VPS45-208ENST00000478999 VGFO15240 615 aaPredicted RBP11.82□□□□□ -0.52
VPS45-208ENST00000478999 ONECUT3O60422 494 aaPredicted RBP11.82□□□□□ -0.52
VPS45-208ENST00000478999 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
VPS45-208ENST00000478999 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
VPS45-208ENST00000478999 VPS72Q15906 364 aa11.81□□□□□ -0.52
VPS45-208ENST00000478999 SPATA31A3Q5VYP0 1347 aa11.81□□□□□ -0.52
VPS45-208ENST00000478999 LRPPRCP42704 1394 aaKnown RBP11.8□□□□□ -0.52
VPS45-208ENST00000478999 EN1Q05925 392 aaPredicted RBP11.8□□□□□ -0.52
VPS45-208ENST00000478999 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
VPS45-208ENST00000478999 NUTM2FA1L443 756 aa11.79□□□□□ -0.52
VPS45-208ENST00000478999 YY1P25490 414 aa11.79□□□□□ -0.52
VPS45-208ENST00000478999 SIN3AQ96ST3 1273 aa11.79□□□□□ -0.52
VPS45-208ENST00000478999 RPGRIP1LQ68CZ1 1315 aa11.79□□□□□ -0.52
VPS45-208ENST00000478999 RREB1Q92766 1687 aa11.78□□□□□ -0.52
VPS45-208ENST00000478999 CCDC9Q9Y3X0 531 aaKnown RBP11.78□□□□□ -0.52
VPS45-208ENST00000478999 THSD7AQ9UPZ6 1657 aa11.78□□□□□ -0.52
VPS45-208ENST00000478999 DISP2A7MBM2 1401 aa11.77□□□□□ -0.52
VPS45-208ENST00000478999 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.52
VPS45-208ENST00000478999 RGL3Q3MIN7 710 aa11.77□□□□□ -0.53
VPS45-208ENST00000478999 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
VPS45-208ENST00000478999 CABLES1Q8TDN4 633 aa11.77□□□□□ -0.53
VPS45-208ENST00000478999 TNS3Q68CZ2 1445 aa11.77□□□□□ -0.53
VPS45-208ENST00000478999 CAMTA1Q9Y6Y1 1673 aa11.76□□□□□ -0.53
VPS45-208ENST00000478999 A0A0G2JS52 829 aa11.76□□□□□ -0.53
VPS45-208ENST00000478999 MYT1Q01538 1121 aa11.76□□□□□ -0.53
VPS45-208ENST00000478999 HAP1P54257 671 aaPredicted RBP11.75□□□□□ -0.53
VPS45-208ENST00000478999 FAM182BQ5T319 152 aa11.75□□□□□ -0.53
VPS45-208ENST00000478999 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
VPS45-208ENST00000478999 COL14A1Q05707 1796 aaKnown RBP11.74□□□□□ -0.53
VPS45-208ENST00000478999 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
VPS45-208ENST00000478999 EZH2Q15910 746 aaKnown RBP11.74□□□□□ -0.53
VPS45-208ENST00000478999 FAM98CQ17RN3 349 aaKnown RBP11.74□□□□□ -0.53
VPS45-208ENST00000478999 KRT28Q7Z3Y7 464 aa11.74□□□□□ -0.53
VPS45-208ENST00000478999 WAPLQ7Z5K2 1190 aa11.74□□□□□ -0.53
VPS45-208ENST00000478999 MPHOSPH9Q99550 1183 aa11.74□□□□□ -0.53
VPS45-208ENST00000478999 PLEKHH1Q9ULM0 1364 aa11.74□□□□□ -0.53
VPS45-208ENST00000478999 TECPR2O15040 1411 aa11.74□□□□□ -0.53
VPS45-208ENST00000478999 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
VPS45-208ENST00000478999 TRPM3Q9HCF6 1732 aaPredicted RBP11.73□□□□□ -0.53
VPS45-208ENST00000478999 ALS2Q96Q42 1657 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms