RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.02□□□□□ -1.29
SUPT20H-215ENST00000478911 RPIAP49247 311 aa7.02□□□□□ -1.29
SUPT20H-215ENST00000478911 TTLL12Q14166 644 aaPredicted RBP7.02□□□□□ -1.29
SUPT20H-215ENST00000478911 PUS10Q3MIT2 529 aaKnown RBP7.02□□□□□ -1.29
SUPT20H-215ENST00000478911 CYP4X1Q8N118 509 aa7.02□□□□□ -1.29
SUPT20H-215ENST00000478911 IL27Q8NEV9 243 aa7.02□□□□□ -1.29
SUPT20H-215ENST00000478911 PHOX2BQ99453 314 aa7.02□□□□□ -1.29
SUPT20H-215ENST00000478911 TOR4AQ9NXH8 423 aa7.02□□□□□ -1.29
SUPT20H-215ENST00000478911 CTC1Q2NKJ3 1217 aa7.01□□□□□ -1.29
SUPT20H-215ENST00000478911 DAXXQ9UER7 740 aaPredicted RBP7.01□□□□□ -1.29
SUPT20H-215ENST00000478911 CD2BP2O95400 341 aaKnown RBP7□□□□□ -1.29
SUPT20H-215ENST00000478911 INSM1Q01101 510 aaPredicted RBP7□□□□□ -1.29
SUPT20H-215ENST00000478911 NFX1Q12986 1120 aaKnown RBP7□□□□□ -1.29
SUPT20H-215ENST00000478911 METTL3Q86U44 580 aaKnown RBP7□□□□□ -1.29
SUPT20H-215ENST00000478911 REPIN1Q9BWE0 567 aaKnown RBP7□□□□□ -1.29
SUPT20H-215ENST00000478911 FAM117AQ9C073 453 aa7□□□□□ -1.29
SUPT20H-215ENST00000478911 WIPF1O43516 503 aa6.99□□□□□ -1.29
SUPT20H-215ENST00000478911 OATP04181 439 aa6.99□□□□□ -1.29
SUPT20H-215ENST00000478911 RSPH4AQ5TD94 716 aa6.99□□□□□ -1.29
SUPT20H-215ENST00000478911 GIGYF2Q6Y7W6 1299 aaKnown RBP6.99□□□□□ -1.29
SUPT20H-215ENST00000478911 FCF1Q9Y324 198 aaKnown RBP6.99□□□□□ -1.29
SUPT20H-215ENST00000478911 PLEKHG3A1L390 1219 aa6.98□□□□□ -1.29
SUPT20H-215ENST00000478911 CLCN1P35523 988 aa6.98□□□□□ -1.29
SUPT20H-215ENST00000478911 SMCPP49901 116 aaPredicted RBP6.98□□□□□ -1.29
SUPT20H-215ENST00000478911 MDM2Q00987 491 aaPredicted RBP6.98□□□□□ -1.29
SUPT20H-215ENST00000478911 PXYLP1Q8TE99 480 aa6.98□□□□□ -1.29
SUPT20H-215ENST00000478911 DDRGK1Q96HY6 314 aa6.98□□□□□ -1.29
SUPT20H-215ENST00000478911 MS4A1P11836 297 aa6.97□□□□□ -1.29
SUPT20H-215ENST00000478911 GPCPD1Q9NPB8 672 aa6.97□□□□□ -1.29
SUPT20H-215ENST00000478911 TTC24A2A3L6 582 aaPredicted RBP6.96□□□□□ -1.3
SUPT20H-215ENST00000478911 NLRP7Q8WX94 980 aa6.96□□□□□ -1.3
SUPT20H-215ENST00000478911 TIMELESSQ9UNS1 1208 aa6.96□□□□□ -1.3
SUPT20H-215ENST00000478911 MORN1Q5T089 497 aa6.94□□□□□ -1.3
SUPT20H-215ENST00000478911 THAP11Q96EK4 314 aa6.94□□□□□ -1.3
SUPT20H-215ENST00000478911 FMNL1O95466 1100 aaPredicted RBP6.93□□□□□ -1.3
SUPT20H-215ENST00000478911 FAM160A2Q8N612 972 aaPredicted RBP6.93□□□□□ -1.3
SUPT20H-215ENST00000478911 RDH13Q8NBN7 331 aa6.93□□□□□ -1.3
SUPT20H-215ENST00000478911 ATP13A2Q9NQ11 1180 aa6.93□□□□□ -1.3
SUPT20H-215ENST00000478911 FAM217BQ9NTX9 383 aaPredicted RBP6.93□□□□□ -1.3
SUPT20H-215ENST00000478911 TERTO14746 1132 aaKnown RBP6.92□□□□□ -1.3
SUPT20H-215ENST00000478911 ZBTB24O43167 697 aaPredicted RBP6.92□□□□□ -1.3
SUPT20H-215ENST00000478911 SNRPBP14678 240 aaKnown RBP6.92□□□□□ -1.3
SUPT20H-215ENST00000478911 SSTR3P32745 418 aaPredicted RBP6.92□□□□□ -1.3
SUPT20H-215ENST00000478911 FUT2Q10981 343 aa6.92□□□□□ -1.3
SUPT20H-215ENST00000478911 PRDM9Q9NQV7 894 aa6.92□□□□□ -1.3
SUPT20H-215ENST00000478911 SMPD1P17405 629 aa6.91□□□□□ -1.3
SUPT20H-215ENST00000478911 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
SUPT20H-215ENST00000478911 ERICH6Q7L0X2 663 aa6.91□□□□□ -1.3
SUPT20H-215ENST00000478911 TRIM47Q96LD4 638 aa6.91□□□□□ -1.3
SUPT20H-215ENST00000478911 SENP2Q9HC62 589 aa6.91□□□□□ -1.3
SUPT20H-215ENST00000478911 SLC27A5Q9Y2P5 690 aa6.91□□□□□ -1.3
SUPT20H-215ENST00000478911 WNT7AO00755 349 aa6.9□□□□□ -1.3
SUPT20H-215ENST00000478911 ATP6V1AP38606 617 aa6.9□□□□□ -1.3
SUPT20H-215ENST00000478911 SNIP1Q8TAD8 396 aaKnown RBP6.9□□□□□ -1.3
SUPT20H-215ENST00000478911 GOPCQ9HD26 462 aa6.9□□□□□ -1.3
SUPT20H-215ENST00000478911 BEGAINQ9BUH8 593 aa6.89□□□□□ -1.31
SUPT20H-215ENST00000478911 DDX11L8A8MPP1 907 aa6.88□□□□□ -1.31
SUPT20H-215ENST00000478911 SALL2Q9Y467 1007 aaPredicted RBP6.88□□□□□ -1.31
SUPT20H-215ENST00000478911 J3QL48 77 aa6.87□□□□□ -1.31
SUPT20H-215ENST00000478911 TRIM32Q13049 653 aa6.87□□□□□ -1.31
SUPT20H-215ENST00000478911 MSS51Q4VC12 460 aa6.87□□□□□ -1.31
SUPT20H-215ENST00000478911 SH3D19Q5HYK7 790 aa6.87□□□□□ -1.31
SUPT20H-215ENST00000478911 BRICD5Q6PL45 260 aa6.87□□□□□ -1.31
SUPT20H-215ENST00000478911 C14orf37Q86TY3 774 aa6.87□□□□□ -1.31
SUPT20H-215ENST00000478911 KIFC2Q96AC6 838 aa6.86□□□□□ -1.31
SUPT20H-215ENST00000478911 MRGPRX2Q96LB1 330 aa6.86□□□□□ -1.31
SUPT20H-215ENST00000478911 FAM181BA6NEQ2 426 aa6.85□□□□□ -1.31
SUPT20H-215ENST00000478911 GCGRP47871 477 aa6.85□□□□□ -1.31
SUPT20H-215ENST00000478911 RNF19BQ6ZMZ0 732 aa6.85□□□□□ -1.31
SUPT20H-215ENST00000478911 HPS1Q92902 700 aa6.85□□□□□ -1.31
SUPT20H-215ENST00000478911 PCMTD1Q96MG8 357 aaPredicted RBP6.85□□□□□ -1.31
SUPT20H-215ENST00000478911 RSPH6AQ9H0K4 717 aa6.85□□□□□ -1.31
SUPT20H-215ENST00000478911 CD46P15529 392 aa6.84□□□□□ -1.31
SUPT20H-215ENST00000478911 SKIV2LQ15477 1246 aaKnown RBP6.84□□□□□ -1.31
SUPT20H-215ENST00000478911 SULF1Q8IWU6 871 aa6.84□□□□□ -1.31
SUPT20H-215ENST00000478911 MYSM1Q5VVJ2 828 aa6.83□□□□□ -1.32
SUPT20H-215ENST00000478911 SLC16A10Q8TF71 515 aa6.83□□□□□ -1.32
SUPT20H-215ENST00000478911 GRIPAP1Q4V328 841 aa6.82□□□□□ -1.32
SUPT20H-215ENST00000478911 TBC1D2Q9BYX2 928 aa6.82□□□□□ -1.32
SUPT20H-215ENST00000478911 MMP16P51512 607 aa6.81□□□□□ -1.32
SUPT20H-215ENST00000478911 Q3C1V9 767 aa6.81□□□□□ -1.32
SUPT20H-215ENST00000478911 DIXDC1Q155Q3 683 aa6.8□□□□□ -1.32
SUPT20H-215ENST00000478911 PROCA1Q8NCQ7 364 aaPredicted RBP6.8□□□□□ -1.32
SUPT20H-215ENST00000478911 SPIRE2Q8WWL2 714 aa6.8□□□□□ -1.32
SUPT20H-215ENST00000478911 POLR3EQ9NVU0 708 aa6.8□□□□□ -1.32
SUPT20H-215ENST00000478911 GMPRP36959 345 aa6.79□□□□□ -1.32
SUPT20H-215ENST00000478911 CLK2P49760 499 aaKnown RBP6.79□□□□□ -1.32
SUPT20H-215ENST00000478911 RC3H1Q5TC82 1133 aaKnown RBP6.79□□□□□ -1.32
SUPT20H-215ENST00000478911 ZSCAN1Q8NBB4 408 aa6.79□□□□□ -1.32
SUPT20H-215ENST00000478911 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.79□□□□□ -1.32
SUPT20H-215ENST00000478911 NXF1Q9UBU9 619 aaKnown RBP6.79□□□□□ -1.32
SUPT20H-215ENST00000478911 DXOO77932 396 aaKnown RBP6.78□□□□□ -1.32
SUPT20H-215ENST00000478911 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
SUPT20H-215ENST00000478911 WNT7BP56706 349 aa6.77□□□□□ -1.33
SUPT20H-215ENST00000478911 SKOR1P84550 965 aa6.77□□□□□ -1.33
SUPT20H-215ENST00000478911 NUTM1Q86Y26 1132 aa6.77□□□□□ -1.33
SUPT20H-215ENST00000478911 CCDC24Q8N4L8 307 aa6.77□□□□□ -1.33
SUPT20H-215ENST00000478911 IRF7Q92985 503 aa6.77□□□□□ -1.33
SUPT20H-215ENST00000478911 USB1Q9BQ65 265 aaKnown RBP6.77□□□□□ -1.33
SUPT20H-215ENST00000478911 KRTAP4-6Q9BYQ5 205 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms