RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 NBPF1Q3BBV0 1214 aa14.35□□□□□ -0.11
SCAMP3-206ENST00000478737 ORAI2Q96SN7 254 aa14.35□□□□□ -0.11
SCAMP3-206ENST00000478737 KIAA1210Q9ULL0 1709 aa14.35□□□□□ -0.11
SCAMP3-206ENST00000478737 POGKQ9P215 609 aa14.34□□□□□ -0.11
SCAMP3-206ENST00000478737 KNDC1Q76NI1 1749 aa14.33□□□□□ -0.12
SCAMP3-206ENST00000478737 NALCNQ8IZF0 1738 aa14.32□□□□□ -0.12
SCAMP3-206ENST00000478737 CDC42BPGQ6DT37 1551 aa14.32□□□□□ -0.12
SCAMP3-206ENST00000478737 CCER1Q8TC90 406 aaPredicted RBP14.32□□□□□ -0.12
SCAMP3-206ENST00000478737 AHDC1Q5TGY3 1603 aaPredicted RBP14.32□□□□□ -0.12
SCAMP3-206ENST00000478737 JCADQ9P266 1359 aa14.32□□□□□ -0.12
SCAMP3-206ENST00000478737 LRRC59Q96AG4 307 aaKnown RBP14.31□□□□□ -0.12
SCAMP3-206ENST00000478737 SOS2Q07890 1332 aaPredicted RBP14.31□□□□□ -0.12
SCAMP3-206ENST00000478737 CLSPNQ9HAW4 1339 aa14.31□□□□□ -0.12
SCAMP3-206ENST00000478737 TRPM1Q7Z4N2 1603 aa14.3□□□□□ -0.12
SCAMP3-206ENST00000478737 SAFB2Q14151 953 aaKnown RBP eCLIP14.3□□□□□ -0.12
SCAMP3-206ENST00000478737 ESCO1Q5FWF5 840 aa14.3□□□□□ -0.12
SCAMP3-206ENST00000478737 TONSLQ96HA7 1378 aa14.3□□□□□ -0.12
SCAMP3-206ENST00000478737 DISP3Q9P2K9 1392 aa14.3□□□□□ -0.12
SCAMP3-206ENST00000478737 NBPF8Q3BBV2 869 aa14.29□□□□□ -0.12
SCAMP3-206ENST00000478737 DDX17Q92841 729 aaKnown RBP14.29□□□□□ -0.12
SCAMP3-206ENST00000478737 WASLO00401 505 aaPredicted RBP14.28□□□□□ -0.12
SCAMP3-206ENST00000478737 COL16A1Q07092 1604 aaPredicted RBP14.28□□□□□ -0.12
SCAMP3-206ENST00000478737 SPATA31A6Q5VVP1 1343 aa14.28□□□□□ -0.12
SCAMP3-206ENST00000478737 FOXO3O43524 673 aa14.27□□□□□ -0.13
SCAMP3-206ENST00000478737 NPHP3Q7Z494 1330 aa14.26□□□□□ -0.13
SCAMP3-206ENST00000478737 MINK1Q8N4C8 1332 aaPredicted RBP14.26□□□□□ -0.13
SCAMP3-206ENST00000478737 NUTM2FA1L443 756 aa14.26□□□□□ -0.13
SCAMP3-206ENST00000478737 TIMELESSQ9UNS1 1208 aa14.26□□□□□ -0.13
SCAMP3-206ENST00000478737 ARHGEF28Q8N1W1 1705 aaKnown RBP14.26□□□□□ -0.13
SCAMP3-206ENST00000478737 ANKARQ7Z5J8 1434 aa14.25□□□□□ -0.13
SCAMP3-206ENST00000478737 GPRASP1Q5JY77 1395 aa14.25□□□□□ -0.13
SCAMP3-206ENST00000478737 HIRIP3Q9BW71 556 aaPredicted RBP14.25□□□□□ -0.13
SCAMP3-206ENST00000478737 PHLPP1O60346 1717 aa14.24□□□□□ -0.13
SCAMP3-206ENST00000478737 PHF8Q9UPP1 1060 aa14.24□□□□□ -0.13
SCAMP3-206ENST00000478737 MED1Q15648 1581 aaPredicted RBP14.24□□□□□ -0.13
SCAMP3-206ENST00000478737 EIF3AQ14152 1382 aaKnown RBP14.23□□□□□ -0.13
SCAMP3-206ENST00000478737 PRR36Q9H6K5 1346 aa14.23□□□□□ -0.13
SCAMP3-206ENST00000478737 CENPJQ9HC77 1338 aaPredicted RBP14.23□□□□□ -0.13
SCAMP3-206ENST00000478737 ADGRB2O60241 1585 aa14.23□□□□□ -0.13
SCAMP3-206ENST00000478737 RGS17Q9UGC6 210 aaPredicted RBP14.23□□□□□ -0.13
SCAMP3-206ENST00000478737 NHSL1Q5SYE7 1610 aa14.23□□□□□ -0.13
SCAMP3-206ENST00000478737 ROCK2O75116 1388 aaKnown RBP14.22□□□□□ -0.13
SCAMP3-206ENST00000478737 PNPLA6Q8IY17 1366 aa14.22□□□□□ -0.13
SCAMP3-206ENST00000478737 CDK19Q9BWU1 502 aa14.22□□□□□ -0.13
SCAMP3-206ENST00000478737 ILDR2Q71H61 639 aa14.21□□□□□ -0.13
SCAMP3-206ENST00000478737 FMN2Q9NZ56 1722 aa14.21□□□□□ -0.14
SCAMP3-206ENST00000478737 PXDNQ92626 1479 aa14.2□□□□□ -0.14
SCAMP3-206ENST00000478737 KRT28Q7Z3Y7 464 aa14.2□□□□□ -0.14
SCAMP3-206ENST00000478737 NUDT16Q96DE0 195 aaKnown RBP14.2□□□□□ -0.14
SCAMP3-206ENST00000478737 RALGAPBQ86X10 1494 aa14.19□□□□□ -0.14
SCAMP3-206ENST00000478737 PSME1Q06323 249 aa14.19□□□□□ -0.14
SCAMP3-206ENST00000478737 PHF23Q9BUL5 403 aaPredicted RBP14.19□□□□□ -0.14
SCAMP3-206ENST00000478737 CCDC61Q9Y6R9 512 aa14.19□□□□□ -0.14
SCAMP3-206ENST00000478737 SPATA31A3Q5VYP0 1347 aa14.18□□□□□ -0.14
SCAMP3-206ENST00000478737 QRICH2Q9H0J4 1663 aa14.18□□□□□ -0.14
SCAMP3-206ENST00000478737 PLEKHG3A1L390 1219 aa14.18□□□□□ -0.14
SCAMP3-206ENST00000478737 XPCQ01831 940 aaPredicted RBP14.18□□□□□ -0.14
SCAMP3-206ENST00000478737 TULP4Q9NRJ4 1543 aa14.18□□□□□ -0.14
SCAMP3-206ENST00000478737 LRP6O75581 1613 aa14.17□□□□□ -0.14
SCAMP3-206ENST00000478737 PMFBP1Q8TBY8 1022 aa14.17□□□□□ -0.14
SCAMP3-206ENST00000478737 CARD11Q9BXL7 1154 aa14.17□□□□□ -0.14
SCAMP3-206ENST00000478737 SBNO1A3KN83 1393 aa14.17□□□□□ -0.14
SCAMP3-206ENST00000478737 SHPRHQ149N8 1683 aa14.17□□□□□ -0.14
SCAMP3-206ENST00000478737 USP32Q8NFA0 1604 aa14.15□□□□□ -0.14
SCAMP3-206ENST00000478737 ATP7BP35670 1465 aa14.15□□□□□ -0.14
SCAMP3-206ENST00000478737 SBNO2Q9Y2G9 1366 aa14.15□□□□□ -0.14
SCAMP3-206ENST00000478737 NUTM2BA6NNL0 878 aaPredicted RBP14.15□□□□□ -0.14
SCAMP3-206ENST00000478737 NUTM2EB1AL46 878 aaPredicted RBP14.15□□□□□ -0.14
SCAMP3-206ENST00000478737 NUTM2AQ8IVF1 878 aaPredicted RBP14.15□□□□□ -0.14
SCAMP3-206ENST00000478737 POLR3AO14802 1390 aaPredicted RBP14.14□□□□□ -0.15
SCAMP3-206ENST00000478737 EVC2Q86UK5 1308 aa14.14□□□□□ -0.15
SCAMP3-206ENST00000478737 KIF1AQ12756 1690 aa14.14□□□□□ -0.15
SCAMP3-206ENST00000478737 SRPK2P78362 688 aaKnown RBP14.13□□□□□ -0.15
SCAMP3-206ENST00000478737 POTEAQ6S8J7 498 aa14.13□□□□□ -0.15
SCAMP3-206ENST00000478737 NGDNQ8NEJ9 315 aaKnown RBP14.13□□□□□ -0.15
SCAMP3-206ENST00000478737 CABP2Q9NPB3 220 aa14.13□□□□□ -0.15
SCAMP3-206ENST00000478737 MEX3CQ5U5Q3 659 aaKnown RBP14.12□□□□□ -0.15
SCAMP3-206ENST00000478737 ZNF772Q68DY9 489 aaPredicted RBP14.12□□□□□ -0.15
SCAMP3-206ENST00000478737 TNS3Q68CZ2 1445 aa14.11□□□□□ -0.15
SCAMP3-206ENST00000478737 PUS7Q96PZ0 661 aaKnown RBP14.11□□□□□ -0.15
SCAMP3-206ENST00000478737 ACEP12821 1306 aa14.11□□□□□ -0.15
SCAMP3-206ENST00000478737 ARHGEF10O15013 1369 aa14.1□□□□□ -0.15
SCAMP3-206ENST00000478737 RGPD8O14715 1765 aaPredicted RBP14.1□□□□□ -0.15
SCAMP3-206ENST00000478737 SLC24A1O60721 1099 aa14.1□□□□□ -0.15
SCAMP3-206ENST00000478737 FNBP4Q8N3X1 1017 aaPredicted RBP14.1□□□□□ -0.15
SCAMP3-206ENST00000478737 COL22A1Q8NFW1 1626 aaPredicted RBP14.09□□□□□ -0.15
SCAMP3-206ENST00000478737 ADAMTS2O95450 1211 aa14.09□□□□□ -0.15
SCAMP3-206ENST00000478737 TESK2Q96S53 571 aa14.09□□□□□ -0.15
SCAMP3-206ENST00000478737 CABP1Q9NZU7 370 aa14.09□□□□□ -0.15
SCAMP3-206ENST00000478737 ITSN1Q15811 1721 aa14.08□□□□□ -0.16
SCAMP3-206ENST00000478737 ST20-MTHFSA0A0A6YYL1 179 aa14.08□□□□□ -0.16
SCAMP3-206ENST00000478737 NGLY1Q96IV0 654 aa14.08□□□□□ -0.16
SCAMP3-206ENST00000478737 C8orf37Q96NL8 207 aa14.08□□□□□ -0.16
SCAMP3-206ENST00000478737 AFF2P51816 1311 aa14.08□□□□□ -0.16
SCAMP3-206ENST00000478737 BRD4O60885 1362 aaPredicted RBP14.08□□□□□ -0.16
SCAMP3-206ENST00000478737 PPIP5K1Q6PFW1 1433 aa14.07□□□□□ -0.16
SCAMP3-206ENST00000478737 SOCS7O14512 581 aa14.07□□□□□ -0.16
SCAMP3-206ENST00000478737 CABLES1Q8TDN4 633 aa14.06□□□□□ -0.16
SCAMP3-206ENST00000478737 ZNF692Q9BU19 519 aaPredicted RBP14.06□□□□□ -0.16
SCAMP3-206ENST00000478737 LMOD2Q6P5Q4 547 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms