RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 QPCTQ16769 361 aa4.12□□□□□ -1.75
PDE1C-208ENST00000478736 PLA2G2CQ5R387 149 aa4.12□□□□□ -1.75
PDE1C-208ENST00000478736 MYSM1Q5VVJ2 828 aa4.12□□□□□ -1.75
PDE1C-208ENST00000478736 BRICD5Q6PL45 260 aa4.12□□□□□ -1.75
PDE1C-208ENST00000478736 NYAP1Q6ZVC0 841 aa4.12□□□□□ -1.75
PDE1C-208ENST00000478736 NUTM1Q86Y26 1132 aa4.12□□□□□ -1.75
PDE1C-208ENST00000478736 FDX1P10109 184 aa4.11□□□□□ -1.75
PDE1C-208ENST00000478736 LAPTM4AQ15012 233 aa4.11□□□□□ -1.75
PDE1C-208ENST00000478736 RSPH4AQ5TD94 716 aa4.11□□□□□ -1.75
PDE1C-208ENST00000478736 RNF223E7ERA6 249 aa4.1□□□□□ -1.75
PDE1C-208ENST00000478736 SLC4A3P48751 1232 aa4.1□□□□□ -1.75
PDE1C-208ENST00000478736 RTL5Q5HYW3 569 aaPredicted RBP4.1□□□□□ -1.75
PDE1C-208ENST00000478736 RSBN1LQ6PCB5 846 aaPredicted RBP4.1□□□□□ -1.75
PDE1C-208ENST00000478736 RIC3Q7Z5B4 369 aa4.1□□□□□ -1.75
PDE1C-208ENST00000478736 SPSB2Q99619 263 aa4.1□□□□□ -1.75
PDE1C-208ENST00000478736 CFAP99D6REC4 459 aa4.09□□□□□ -1.75
PDE1C-208ENST00000478736 SPTLC1O15269 473 aa4.09□□□□□ -1.75
PDE1C-208ENST00000478736 NR1I2O75469 434 aa4.09□□□□□ -1.75
PDE1C-208ENST00000478736 HRCP23327 699 aa4.09□□□□□ -1.75
PDE1C-208ENST00000478736 C6orf229H3BNL8 230 aa4.08□□□□□ -1.76
PDE1C-208ENST00000478736 GFRA3O60609 400 aa4.08□□□□□ -1.76
PDE1C-208ENST00000478736 ADH1BP00325 375 aa4.08□□□□□ -1.76
PDE1C-208ENST00000478736 LIAT1Q6ZQX7 453 aa4.08□□□□□ -1.76
PDE1C-208ENST00000478736 SLC6A16Q9GZN6 736 aa4.08□□□□□ -1.76
PDE1C-208ENST00000478736 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.08□□□□□ -1.76
PDE1C-208ENST00000478736 PER1O15534 1290 aaPredicted RBP4.07□□□□□ -1.76
PDE1C-208ENST00000478736 FMNL1O95466 1100 aaPredicted RBP4.07□□□□□ -1.76
PDE1C-208ENST00000478736 USP46P62068 366 aa4.07□□□□□ -1.76
PDE1C-208ENST00000478736 PTCRAQ6ISU1 281 aaPredicted RBP4.07□□□□□ -1.76
PDE1C-208ENST00000478736 NECTIN2Q92692 538 aa4.07□□□□□ -1.76
PDE1C-208ENST00000478736 PRR14Q9BWN1 585 aa4.07□□□□□ -1.76
PDE1C-208ENST00000478736 LILRB3O75022 631 aa4.06□□□□□ -1.76
PDE1C-208ENST00000478736 CLK2P49760 499 aaKnown RBP4.06□□□□□ -1.76
PDE1C-208ENST00000478736 PRR7Q8TB68 274 aa4.06□□□□□ -1.76
PDE1C-208ENST00000478736 USB1Q9BQ65 265 aaKnown RBP4.06□□□□□ -1.76
PDE1C-208ENST00000478736 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.06□□□□□ -1.76
PDE1C-208ENST00000478736 CTDSPL2Q05D32 466 aa4.05□□□□□ -1.76
PDE1C-208ENST00000478736 MTMR2Q13614 643 aa4.05□□□□□ -1.76
PDE1C-208ENST00000478736 SKIV2LQ15477 1246 aaKnown RBP4.05□□□□□ -1.76
PDE1C-208ENST00000478736 GRIPAP1Q4V328 841 aa4.05□□□□□ -1.76
PDE1C-208ENST00000478736 SH3D19Q5HYK7 790 aa4.05□□□□□ -1.76
PDE1C-208ENST00000478736 PRKD2Q9BZL6 878 aa4.05□□□□□ -1.76
PDE1C-208ENST00000478736 FCF1Q9Y324 198 aaKnown RBP4.05□□□□□ -1.76
PDE1C-208ENST00000478736 SALL2Q9Y467 1007 aaPredicted RBP4.05□□□□□ -1.76
PDE1C-208ENST00000478736 DXOO77932 396 aaKnown RBP4.04□□□□□ -1.76
PDE1C-208ENST00000478736 MMP16P51512 607 aa4.04□□□□□ -1.76
PDE1C-208ENST00000478736 RETREG3Q86VR2 466 aa4.04□□□□□ -1.76
PDE1C-208ENST00000478736 CCDC24Q8N4L8 307 aa4.04□□□□□ -1.76
PDE1C-208ENST00000478736 EPS8L1Q8TE68 723 aa4.04□□□□□ -1.76
PDE1C-208ENST00000478736 TSC1Q92574 1164 aa4.04□□□□□ -1.76
PDE1C-208ENST00000478736 DDRGK1Q96HY6 314 aa4.04□□□□□ -1.76
PDE1C-208ENST00000478736 NUTM2BA6NNL0 878 aaPredicted RBP4.03□□□□□ -1.76
PDE1C-208ENST00000478736 NUTM2EB1AL46 878 aaPredicted RBP4.03□□□□□ -1.76
PDE1C-208ENST00000478736 JUNDP17535 347 aa4.03□□□□□ -1.76
PDE1C-208ENST00000478736 Q3C1V9 767 aa4.03□□□□□ -1.76
PDE1C-208ENST00000478736 MSS51Q4VC12 460 aa4.03□□□□□ -1.76
PDE1C-208ENST00000478736 NUTM2DQ5VT03 806 aaPredicted RBP4.03□□□□□ -1.76
PDE1C-208ENST00000478736 NUTM2AQ8IVF1 878 aaPredicted RBP4.03□□□□□ -1.76
PDE1C-208ENST00000478736 LRRN4Q8WUT4 740 aa4.03□□□□□ -1.76
PDE1C-208ENST00000478736 MAP10Q9P2G4 905 aa4.03□□□□□ -1.76
PDE1C-208ENST00000478736 ATP1B4Q9UN42 357 aaPredicted RBP4.03□□□□□ -1.76
PDE1C-208ENST00000478736 SLC19A1P41440 591 aa4.02□□□□□ -1.77
PDE1C-208ENST00000478736 SKOR1P84550 965 aa4.02□□□□□ -1.77
PDE1C-208ENST00000478736 TRIM67Q6ZTA4 783 aa4.02□□□□□ -1.77
PDE1C-208ENST00000478736 ANKLE1Q8NAG6 615 aa4.02□□□□□ -1.77
PDE1C-208ENST00000478736 RSPH6AQ9H0K4 717 aa4.02□□□□□ -1.77
PDE1C-208ENST00000478736 ZBTB3Q9H5J0 574 aa4.02□□□□□ -1.77
PDE1C-208ENST00000478736 HMX1Q9NP08 348 aaPredicted RBP4.02□□□□□ -1.77
PDE1C-208ENST00000478736 GJA5P36382 358 aa4.01□□□□□ -1.77
PDE1C-208ENST00000478736 RFC5P40937 340 aa4.01□□□□□ -1.77
PDE1C-208ENST00000478736 SUZ12Q15022 739 aaKnown RBP4.01□□□□□ -1.77
PDE1C-208ENST00000478736 AP1G2O75843 785 aa4□□□□□ -1.77
PDE1C-208ENST00000478736 DIXDC1Q155Q3 683 aa4□□□□□ -1.77
PDE1C-208ENST00000478736 TUSC1Q2TAM9 212 aa4□□□□□ -1.77
PDE1C-208ENST00000478736 PRPF38BQ5VTL8 546 aaKnown RBP4□□□□□ -1.77
PDE1C-208ENST00000478736 SPRYD7Q5W111 196 aa4□□□□□ -1.77
PDE1C-208ENST00000478736 PPP2R2DQ66LE6 453 aa4□□□□□ -1.77
PDE1C-208ENST00000478736 LYPD8Q6UX82 237 aa4□□□□□ -1.77
PDE1C-208ENST00000478736 NUDT12Q9BQG2 462 aa4□□□□□ -1.77
PDE1C-208ENST00000478736 SNRKQ9NRH2 765 aa4□□□□□ -1.77
PDE1C-208ENST00000478736 TNFRSF10AO00220 468 aa3.99□□□□□ -1.77
PDE1C-208ENST00000478736 F12P00748 615 aaPredicted RBP3.99□□□□□ -1.77
PDE1C-208ENST00000478736 FOXC1Q12948 553 aa3.99□□□□□ -1.77
PDE1C-208ENST00000478736 LINC01559Q495D7 138 aa3.99□□□□□ -1.77
PDE1C-208ENST00000478736 BAP1Q92560 729 aa3.99□□□□□ -1.77
PDE1C-208ENST00000478736 EVA1BQ9NVM1 165 aa3.99□□□□□ -1.77
PDE1C-208ENST00000478736 PKD2L1Q9P0L9 805 aa3.99□□□□□ -1.77
PDE1C-208ENST00000478736 STK17AQ9UEE5 414 aa3.99□□□□□ -1.77
PDE1C-208ENST00000478736 NRG2O14511 850 aaPredicted RBP3.98□□□□□ -1.77
PDE1C-208ENST00000478736 GDF9O60383 454 aa3.98□□□□□ -1.77
PDE1C-208ENST00000478736 CTHP32929 405 aa3.98□□□□□ -1.77
PDE1C-208ENST00000478736 GGCXP38435 758 aa3.98□□□□□ -1.77
PDE1C-208ENST00000478736 SH3BP2P78314 561 aa3.98□□□□□ -1.77
PDE1C-208ENST00000478736 KCNH2Q12809 1159 aa3.98□□□□□ -1.77
PDE1C-208ENST00000478736 NR6A1Q15406 480 aa3.98□□□□□ -1.77
PDE1C-208ENST00000478736 PTPRNQ16849 979 aa3.98□□□□□ -1.77
PDE1C-208ENST00000478736 PCMTD1Q96MG8 357 aaPredicted RBP3.98□□□□□ -1.77
PDE1C-208ENST00000478736 UNC93B1Q9H1C4 597 aa3.98□□□□□ -1.77
PDE1C-208ENST00000478736 GOPCQ9HD26 462 aa3.98□□□□□ -1.77
PDE1C-208ENST00000478736 SPDYE5A6NIY4 337 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms