RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 RPGRIP1LQ68CZ1 1315 aa23.51■■□□□ 1.35
GARNL3-215ENST00000478702 RAB3GAP2Q9H2M9 1393 aa23.51■■□□□ 1.35
GARNL3-215ENST00000478702 ACIN1Q9UKV3 1341 aaKnown RBP23.5■■□□□ 1.35
GARNL3-215ENST00000478702 KNDC1Q76NI1 1749 aa23.47■■□□□ 1.35
GARNL3-215ENST00000478702 MYOM2P54296 1465 aa23.46■■□□□ 1.35
GARNL3-215ENST00000478702 PXDNQ92626 1479 aa23.46■■□□□ 1.35
GARNL3-215ENST00000478702 USP21Q9UK80 565 aa23.45■■□□□ 1.34
GARNL3-215ENST00000478702 ATRNO75882 1429 aa23.44■■□□□ 1.34
GARNL3-215ENST00000478702 FNBP4Q8N3X1 1017 aaPredicted RBP23.44■■□□□ 1.34
GARNL3-215ENST00000478702 MPHOSPH9Q99550 1183 aa23.44■■□□□ 1.34
GARNL3-215ENST00000478702 RGPD8O14715 1765 aaPredicted RBP23.43■■□□□ 1.34
GARNL3-215ENST00000478702 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
GARNL3-215ENST00000478702 FMN2Q9NZ56 1722 aa23.42■■□□□ 1.34
GARNL3-215ENST00000478702 FOXD1Q16676 465 aa23.42■■□□□ 1.34
GARNL3-215ENST00000478702 ADGRF5Q8IZF2 1346 aa23.41■■□□□ 1.34
GARNL3-215ENST00000478702 TRPC5Q9UL62 973 aaPredicted RBP23.41■■□□□ 1.34
GARNL3-215ENST00000478702 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.41■■□□□ 1.34
GARNL3-215ENST00000478702 TECPR2O15040 1411 aa23.41■■□□□ 1.34
GARNL3-215ENST00000478702 ATAD2Q6PL18 1390 aa23.4■■□□□ 1.34
GARNL3-215ENST00000478702 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
GARNL3-215ENST00000478702 BCL9LQ86UU0 1499 aa23.39■■□□□ 1.34
GARNL3-215ENST00000478702 ESCO1Q5FWF5 840 aa23.39■■□□□ 1.33
GARNL3-215ENST00000478702 SPATA31E1Q6ZUB1 1445 aa23.39■■□□□ 1.33
GARNL3-215ENST00000478702 EP400Q96L91 3159 aa23.37■■□□□ 1.33
GARNL3-215ENST00000478702 KIF1AQ12756 1690 aa23.36■■□□□ 1.33
GARNL3-215ENST00000478702 FOXO3O43524 673 aa23.36■■□□□ 1.33
GARNL3-215ENST00000478702 XPCQ01831 940 aaPredicted RBP23.36■■□□□ 1.33
GARNL3-215ENST00000478702 WAPLQ7Z5K2 1190 aa23.36■■□□□ 1.33
GARNL3-215ENST00000478702 LRPPRCP42704 1394 aaKnown RBP23.35■■□□□ 1.33
GARNL3-215ENST00000478702 PLEKHH1Q9ULM0 1364 aa23.35■■□□□ 1.33
GARNL3-215ENST00000478702 BRWD3Q6RI45 1802 aa23.35■■□□□ 1.33
GARNL3-215ENST00000478702 NUTM2FA1L443 756 aa23.33■■□□□ 1.33
GARNL3-215ENST00000478702 RGL3Q3MIN7 710 aa23.33■■□□□ 1.33
GARNL3-215ENST00000478702 STK26Q9P289 416 aa23.33■■□□□ 1.33
GARNL3-215ENST00000478702 PIK3C2GO75747 1445 aa23.33■■□□□ 1.32
GARNL3-215ENST00000478702 GLI3P10071 1580 aa23.32■■□□□ 1.32
GARNL3-215ENST00000478702 ABCC11Q96J66 1382 aa23.32■■□□□ 1.32
GARNL3-215ENST00000478702 ANKRD30BQ9BXX2 1392 aa23.31■■□□□ 1.32
GARNL3-215ENST00000478702 HRCP23327 699 aa23.31■■□□□ 1.32
GARNL3-215ENST00000478702 TMEM132EQ6IEE7 984 aa23.31■■□□□ 1.32
GARNL3-215ENST00000478702 USP32Q8NFA0 1604 aa23.3■■□□□ 1.32
GARNL3-215ENST00000478702 ABCA3Q99758 1704 aa23.3■■□□□ 1.32
GARNL3-215ENST00000478702 SLIT2O94813 1529 aa23.28■■□□□ 1.32
GARNL3-215ENST00000478702 YTHDC2Q9H6S0 1430 aaKnown RBP23.28■■□□□ 1.32
GARNL3-215ENST00000478702 SRCAPQ6ZRS2 3230 aa23.27■■□□□ 1.32
GARNL3-215ENST00000478702 GJD4Q96KN9 370 aaPredicted RBP23.27■■□□□ 1.32
GARNL3-215ENST00000478702 PLCH1Q4KWH8 1693 aa23.26■■□□□ 1.31
GARNL3-215ENST00000478702 SPATA31A3Q5VYP0 1347 aa23.26■■□□□ 1.31
GARNL3-215ENST00000478702 NWD2Q9ULI1 1742 aa23.24■■□□□ 1.31
GARNL3-215ENST00000478702 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
GARNL3-215ENST00000478702 NRXN1Q9ULB1 1477 aa23.22■■□□□ 1.31
GARNL3-215ENST00000478702 UNC5CLQ8IV45 518 aa23.21■■□□□ 1.31
GARNL3-215ENST00000478702 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
GARNL3-215ENST00000478702 CCDC125Q86Z20 511 aa23.19■■□□□ 1.3
GARNL3-215ENST00000478702 SIRT1Q96EB6 747 aa23.19■■□□□ 1.3
GARNL3-215ENST00000478702 TNS3Q68CZ2 1445 aa23.18■■□□□ 1.3
GARNL3-215ENST00000478702 C14orf93Q9H972 538 aaKnown RBP23.18■■□□□ 1.3
GARNL3-215ENST00000478702 ZRANB1Q9UGI0 708 aa23.17■■□□□ 1.3
GARNL3-215ENST00000478702 TRPM3Q9HCF6 1732 aaPredicted RBP23.16■■□□□ 1.3
GARNL3-215ENST00000478702 PHF8Q9UPP1 1060 aa23.16■■□□□ 1.3
GARNL3-215ENST00000478702 NRAPQ86VF7 1730 aa23.16■■□□□ 1.3
GARNL3-215ENST00000478702 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
GARNL3-215ENST00000478702 CABLES1Q8TDN4 633 aa23.14■■□□□ 1.29
GARNL3-215ENST00000478702 BLMP54132 1417 aaPredicted RBP23.14■■□□□ 1.29
GARNL3-215ENST00000478702 ADGRB2O60241 1585 aa23.14■■□□□ 1.29
GARNL3-215ENST00000478702 DLC1Q96QB1 1528 aa23.13■■□□□ 1.29
GARNL3-215ENST00000478702 DHX57Q6P158 1386 aaKnown RBP23.13■■□□□ 1.29
GARNL3-215ENST00000478702 ALS2Q96Q42 1657 aa23.13■■□□□ 1.29
GARNL3-215ENST00000478702 SBNO1A3KN83 1393 aa23.12■■□□□ 1.29
GARNL3-215ENST00000478702 CRYBG1Q9Y4K1 1723 aa23.11■■□□□ 1.29
GARNL3-215ENST00000478702 ADGRB1O14514 1584 aa23.1■■□□□ 1.29
GARNL3-215ENST00000478702 PSME1Q06323 249 aa23.09■■□□□ 1.29
GARNL3-215ENST00000478702 SAFB2Q14151 953 aaKnown RBP eCLIP23.09■■□□□ 1.29
GARNL3-215ENST00000478702 VPS72Q15906 364 aa23.09■■□□□ 1.29
GARNL3-215ENST00000478702 PRAM1Q96QH2 718 aa23.09■■□□□ 1.29
GARNL3-215ENST00000478702 PLEKHG5O94827 1062 aa23.08■■□□□ 1.29
GARNL3-215ENST00000478702 SEPT12Q8IYM1 358 aa23.08■■□□□ 1.29
GARNL3-215ENST00000478702 ANKARQ7Z5J8 1434 aa23.08■■□□□ 1.28
GARNL3-215ENST00000478702 HAP1P54257 671 aaPredicted RBP23.07■■□□□ 1.28
GARNL3-215ENST00000478702 DEFB132Q7Z7B7 95 aa23.07■■□□□ 1.28
GARNL3-215ENST00000478702 ARHGEF10O15013 1369 aa23.06■■□□□ 1.28
GARNL3-215ENST00000478702 ONECUT3O60422 494 aaPredicted RBP23.06■■□□□ 1.28
GARNL3-215ENST00000478702 PMFBP1Q8TBY8 1022 aa23.05■■□□□ 1.28
GARNL3-215ENST00000478702 COL14A1Q05707 1796 aaKnown RBP23.04■■□□□ 1.28
GARNL3-215ENST00000478702 LMOD2Q6P5Q4 547 aa23.04■■□□□ 1.28
GARNL3-215ENST00000478702 FAM83GA6ND36 823 aa23.03■■□□□ 1.28
GARNL3-215ENST00000478702 POGKQ9P215 609 aa23.01■■□□□ 1.27
GARNL3-215ENST00000478702 CCDC9Q9Y3X0 531 aaKnown RBP23.01■■□□□ 1.27
GARNL3-215ENST00000478702 LRP5O75197 1615 aa23■■□□□ 1.27
GARNL3-215ENST00000478702 ARHGEF28Q8N1W1 1705 aaKnown RBP23■■□□□ 1.27
GARNL3-215ENST00000478702 KIAA1210Q9ULL0 1709 aa23■■□□□ 1.27
GARNL3-215ENST00000478702 TULP4Q9NRJ4 1543 aa23■■□□□ 1.27
GARNL3-215ENST00000478702 KRT27Q7Z3Y8 459 aa23■■□□□ 1.27
GARNL3-215ENST00000478702 PRR36Q9H6K5 1346 aa23■■□□□ 1.27
GARNL3-215ENST00000478702 RGPD1P0DJD0 1748 aa22.99■■□□□ 1.27
GARNL3-215ENST00000478702 ITSN1Q15811 1721 aa22.99■■□□□ 1.27
GARNL3-215ENST00000478702 HIRIP3Q9BW71 556 aaPredicted RBP22.98■■□□□ 1.27
GARNL3-215ENST00000478702 TRAK1Q9UPV9 953 aa22.97■■□□□ 1.27
GARNL3-215ENST00000478702 SF3B2Q13435 895 aaKnown RBP22.96■■□□□ 1.27
GARNL3-215ENST00000478702 THSD7AQ9UPZ6 1657 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 202.3 ms