RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 STK26Q9P289 416 aa32.56■■■□□ 2.8
MCF2L2-210ENST00000478652 PLEKHH1Q9ULM0 1364 aa32.54■■■□□ 2.8
MCF2L2-210ENST00000478652 FMN2Q9NZ56 1722 aa32.54■■■□□ 2.8
MCF2L2-210ENST00000478652 NRXN1Q9ULB1 1477 aa32.54■■■□□ 2.8
MCF2L2-210ENST00000478652 WAPLQ7Z5K2 1190 aa32.53■■■□□ 2.8
MCF2L2-210ENST00000478652 ACIN1Q9UKV3 1341 aaKnown RBP32.52■■■□□ 2.8
MCF2L2-210ENST00000478652 ZNF772Q68DY9 489 aaPredicted RBP32.52■■■□□ 2.8
MCF2L2-210ENST00000478652 MYOM2P54296 1465 aa32.52■■■□□ 2.8
MCF2L2-210ENST00000478652 SOS2Q07890 1332 aaPredicted RBP32.51■■■□□ 2.8
MCF2L2-210ENST00000478652 YTHDC2Q9H6S0 1430 aaKnown RBP32.51■■■□□ 2.79
MCF2L2-210ENST00000478652 RGPD8O14715 1765 aaPredicted RBP32.5■■■□□ 2.79
MCF2L2-210ENST00000478652 ABCC11Q96J66 1382 aa32.5■■■□□ 2.79
MCF2L2-210ENST00000478652 COL22A1Q8NFW1 1626 aaPredicted RBP32.48■■■□□ 2.79
MCF2L2-210ENST00000478652 AFF2P51816 1311 aa32.47■■■□□ 2.79
MCF2L2-210ENST00000478652 PXDNQ92626 1479 aa32.44■■■□□ 2.78
MCF2L2-210ENST00000478652 NUTM2FA1L443 756 aa32.43■■■□□ 2.78
MCF2L2-210ENST00000478652 C14orf93Q9H972 538 aaKnown RBP32.43■■■□□ 2.78
MCF2L2-210ENST00000478652 ESCO1Q5FWF5 840 aa32.42■■■□□ 2.78
MCF2L2-210ENST00000478652 CFAP70Q5T0N1 1121 aa32.42■■■□□ 2.78
MCF2L2-210ENST00000478652 C8orf37Q96NL8 207 aa32.42■■■□□ 2.78
MCF2L2-210ENST00000478652 MARF1Q9Y4F3 1742 aaKnown RBP32.42■■■□□ 2.78
MCF2L2-210ENST00000478652 KIF1AQ12756 1690 aa32.39■■■□□ 2.78
MCF2L2-210ENST00000478652 ADAMTS2O95450 1211 aa32.37■■■□□ 2.77
MCF2L2-210ENST00000478652 NPHP3Q7Z494 1330 aa32.36■■■□□ 2.77
MCF2L2-210ENST00000478652 XPCQ01831 940 aaPredicted RBP32.36■■■□□ 2.77
MCF2L2-210ENST00000478652 RXRBP28702 533 aa32.35■■■□□ 2.77
MCF2L2-210ENST00000478652 ADGRB1O14514 1584 aa32.35■■■□□ 2.77
MCF2L2-210ENST00000478652 CDK12Q9NYV4 1490 aaPredicted RBP32.35■■■□□ 2.77
MCF2L2-210ENST00000478652 FOXO3O43524 673 aa32.34■■■□□ 2.77
MCF2L2-210ENST00000478652 DHX57Q6P158 1386 aaKnown RBP32.33■■■□□ 2.77
MCF2L2-210ENST00000478652 DLC1Q96QB1 1528 aa32.31■■■□□ 2.76
MCF2L2-210ENST00000478652 SIRT1Q96EB6 747 aa32.31■■■□□ 2.76
MCF2L2-210ENST00000478652 USP32Q8NFA0 1604 aa32.29■■■□□ 2.76
MCF2L2-210ENST00000478652 RGS12O14924 1447 aa32.29■■■□□ 2.76
MCF2L2-210ENST00000478652 NGLY1Q96IV0 654 aa32.29■■■□□ 2.76
MCF2L2-210ENST00000478652 SAFB2Q14151 953 aaKnown RBP eCLIP32.27■■■□□ 2.76
MCF2L2-210ENST00000478652 QTRT2Q9H974 415 aaKnown RBP32.27■■■□□ 2.76
MCF2L2-210ENST00000478652 ADGRB2O60241 1585 aa32.27■■■□□ 2.76
MCF2L2-210ENST00000478652 PRAM1Q96QH2 718 aa32.26■■■□□ 2.75
MCF2L2-210ENST00000478652 HRCP23327 699 aa32.23■■■□□ 2.75
MCF2L2-210ENST00000478652 UPF1Q92900 1129 aaKnown RBP eCLIP32.23■■■□□ 2.75
MCF2L2-210ENST00000478652 KDM2AQ9Y2K7 1162 aa32.23■■■□□ 2.75
MCF2L2-210ENST00000478652 RBM6P78332 1123 aaKnown RBP32.22■■■□□ 2.75
MCF2L2-210ENST00000478652 DCAF11Q8TEB1 546 aa32.21■■■□□ 2.75
MCF2L2-210ENST00000478652 ARHGEF28Q8N1W1 1705 aaKnown RBP32.2■■■□□ 2.75
MCF2L2-210ENST00000478652 ABCA3Q99758 1704 aa32.2■■■□□ 2.74
MCF2L2-210ENST00000478652 USP21Q9UK80 565 aa32.19■■■□□ 2.74
MCF2L2-210ENST00000478652 FNBP4Q8N3X1 1017 aaPredicted RBP32.17■■■□□ 2.74
MCF2L2-210ENST00000478652 SPATA31A3Q5VYP0 1347 aa32.17■■■□□ 2.74
MCF2L2-210ENST00000478652 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.17■■■□□ 2.74
MCF2L2-210ENST00000478652 POGKQ9P215 609 aa32.16■■■□□ 2.74
MCF2L2-210ENST00000478652 PHF8Q9UPP1 1060 aa32.16■■■□□ 2.74
MCF2L2-210ENST00000478652 TRAK1Q9UPV9 953 aa32.16■■■□□ 2.74
MCF2L2-210ENST00000478652 ATRNO75882 1429 aa32.16■■■□□ 2.74
MCF2L2-210ENST00000478652 KRT28Q7Z3Y7 464 aa32.14■■■□□ 2.74
MCF2L2-210ENST00000478652 TNS3Q68CZ2 1445 aa32.13■■■□□ 2.73
MCF2L2-210ENST00000478652 BCL9LQ86UU0 1499 aa32.13■■■□□ 2.73
MCF2L2-210ENST00000478652 TRPM3Q9HCF6 1732 aaPredicted RBP32.12■■■□□ 2.73
MCF2L2-210ENST00000478652 ANKARQ7Z5J8 1434 aa32.12■■■□□ 2.73
MCF2L2-210ENST00000478652 HIRIP3Q9BW71 556 aaPredicted RBP32.11■■■□□ 2.73
MCF2L2-210ENST00000478652 TRPC5Q9UL62 973 aaPredicted RBP32.11■■■□□ 2.73
MCF2L2-210ENST00000478652 PLCH1Q4KWH8 1693 aa32.08■■■□□ 2.73
MCF2L2-210ENST00000478652 MINK1Q8N4C8 1332 aaPredicted RBP32.08■■■□□ 2.73
MCF2L2-210ENST00000478652 TULP4Q9NRJ4 1543 aa32.07■■■□□ 2.72
MCF2L2-210ENST00000478652 KIAA1210Q9ULL0 1709 aa32.07■■■□□ 2.72
MCF2L2-210ENST00000478652 PMFBP1Q8TBY8 1022 aa32.06■■■□□ 2.72
MCF2L2-210ENST00000478652 ALS2Q96Q42 1657 aa32.05■■■□□ 2.72
MCF2L2-210ENST00000478652 PRR36Q9H6K5 1346 aa32.05■■■□□ 2.72
MCF2L2-210ENST00000478652 SLIT2O94813 1529 aa32.05■■■□□ 2.72
MCF2L2-210ENST00000478652 ITSN1Q15811 1721 aa32.04■■■□□ 2.72
MCF2L2-210ENST00000478652 STAC3Q96MF2 364 aa32.04■■■□□ 2.72
MCF2L2-210ENST00000478652 SBNO1A3KN83 1393 aa32.04■■■□□ 2.72
MCF2L2-210ENST00000478652 GLI3P10071 1580 aa32.02■■■□□ 2.72
MCF2L2-210ENST00000478652 CABLES1Q8TDN4 633 aa32.02■■■□□ 2.72
MCF2L2-210ENST00000478652 NWD2Q9ULI1 1742 aa32.01■■■□□ 2.72
MCF2L2-210ENST00000478652 PLEKHG5O94827 1062 aa32.01■■■□□ 2.71
MCF2L2-210ENST00000478652 PSME1Q06323 249 aa32.01■■■□□ 2.71
MCF2L2-210ENST00000478652 CRYBG1Q9Y4K1 1723 aa32■■■□□ 2.71
MCF2L2-210ENST00000478652 BRWD3Q6RI45 1802 aa31.98■■■□□ 2.71
MCF2L2-210ENST00000478652 WASLO00401 505 aaPredicted RBP31.98■■■□□ 2.71
MCF2L2-210ENST00000478652 EIF3AQ14152 1382 aaKnown RBP31.96■■■□□ 2.71
MCF2L2-210ENST00000478652 LMOD2Q6P5Q4 547 aa31.96■■■□□ 2.71
MCF2L2-210ENST00000478652 ATP7BP35670 1465 aa31.96■■■□□ 2.71
MCF2L2-210ENST00000478652 TOPAZ1Q8N9V7 1692 aa31.95■■■□□ 2.71
MCF2L2-210ENST00000478652 ARHGEF10O15013 1369 aa31.95■■■□□ 2.71
MCF2L2-210ENST00000478652 GJD4Q96KN9 370 aaPredicted RBP31.94■■■□□ 2.7
MCF2L2-210ENST00000478652 RALGAPBQ86X10 1494 aa31.94■■■□□ 2.7
MCF2L2-210ENST00000478652 ATAD2Q6PL18 1390 aa31.94■■■□□ 2.7
MCF2L2-210ENST00000478652 NRAPQ86VF7 1730 aa31.93■■■□□ 2.7
MCF2L2-210ENST00000478652 HAP1P54257 671 aaPredicted RBP31.93■■■□□ 2.7
MCF2L2-210ENST00000478652 UNC5CLQ8IV45 518 aa31.93■■■□□ 2.7
MCF2L2-210ENST00000478652 GPRASP1Q5JY77 1395 aa31.88■■■□□ 2.69
MCF2L2-210ENST00000478652 NBPF1Q3BBV0 1214 aa31.87■■■□□ 2.69
MCF2L2-210ENST00000478652 EP400Q96L91 3159 aa31.85■■■□□ 2.69
MCF2L2-210ENST00000478652 COL14A1Q05707 1796 aaKnown RBP31.85■■■□□ 2.69
MCF2L2-210ENST00000478652 QRICH2Q9H0J4 1663 aa31.83■■■□□ 2.69
MCF2L2-210ENST00000478652 PHRF1Q9P1Y6 1649 aaKnown RBP31.83■■■□□ 2.69
MCF2L2-210ENST00000478652 NGDNQ8NEJ9 315 aaKnown RBP31.83■■■□□ 2.69
MCF2L2-210ENST00000478652 NUDT16Q96DE0 195 aaKnown RBP31.83■■■□□ 2.69
MCF2L2-210ENST00000478652 FAM83GA6ND36 823 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms