RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 BCAR3O75815 825 aa17.54■□□□□ 0.4
NPHP4-208ENST00000478423 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
NPHP4-208ENST00000478423 AAMPQ13685 434 aa17.53■□□□□ 0.4
NPHP4-208ENST00000478423 SYTL4Q96C24 671 aaPredicted RBP17.53■□□□□ 0.4
NPHP4-208ENST00000478423 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
NPHP4-208ENST00000478423 GOLGA6L6A8MZA4 724 aa17.53■□□□□ 0.4
NPHP4-208ENST00000478423 FRAT2O75474 233 aaPredicted RBP17.53■□□□□ 0.4
NPHP4-208ENST00000478423 FANCIQ9NVI1 1328 aa17.52■□□□□ 0.4
NPHP4-208ENST00000478423 FOXD4L5Q5VV16 416 aaPredicted RBP17.52■□□□□ 0.4
NPHP4-208ENST00000478423 FOXD4L4Q8WXT5 416 aaPredicted RBP17.52■□□□□ 0.4
NPHP4-208ENST00000478423 GPATCH8Q9UKJ3 1502 aaKnown RBP17.52■□□□□ 0.39
NPHP4-208ENST00000478423 IDI1Q13907 227 aa17.52■□□□□ 0.39
NPHP4-208ENST00000478423 ADGRF5Q8IZF2 1346 aa17.52■□□□□ 0.39
NPHP4-208ENST00000478423 ATAD2Q6PL18 1390 aa17.52■□□□□ 0.39
NPHP4-208ENST00000478423 GAS2L2Q8NHY3 880 aa17.51■□□□□ 0.39
NPHP4-208ENST00000478423 DIAPH3Q9NSV4 1193 aa17.51■□□□□ 0.39
NPHP4-208ENST00000478423 CCDC61Q9Y6R9 512 aa17.51■□□□□ 0.39
NPHP4-208ENST00000478423 REC8O95072 547 aa17.51■□□□□ 0.39
NPHP4-208ENST00000478423 RPRD2Q5VT52 1461 aaKnown RBP17.51■□□□□ 0.39
NPHP4-208ENST00000478423 PTPRKQ15262 1439 aa17.51■□□□□ 0.39
NPHP4-208ENST00000478423 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
NPHP4-208ENST00000478423 TWISTNBQ3B726 338 aaPredicted RBP17.5■□□□□ 0.39
NPHP4-208ENST00000478423 MSNP26038 577 aaKnown RBP17.5■□□□□ 0.39
NPHP4-208ENST00000478423 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
NPHP4-208ENST00000478423 TOMM22Q9NS69 142 aa17.5■□□□□ 0.39
NPHP4-208ENST00000478423 SYAP1Q96A49 352 aaPredicted RBP17.5■□□□□ 0.39
NPHP4-208ENST00000478423 WAPLQ7Z5K2 1190 aa17.49■□□□□ 0.39
NPHP4-208ENST00000478423 AIMP1Q12904 312 aaKnown RBP17.49■□□□□ 0.39
NPHP4-208ENST00000478423 DRC7Q8IY82 874 aa17.49■□□□□ 0.39
NPHP4-208ENST00000478423 IFIT2P09913 472 aaKnown RBP17.49■□□□□ 0.39
NPHP4-208ENST00000478423 FBXO31Q5XUX0 539 aaPredicted RBP17.49■□□□□ 0.39
NPHP4-208ENST00000478423 RRS1Q15050 365 aaKnown RBP17.48■□□□□ 0.39
NPHP4-208ENST00000478423 NSD3Q9BZ95 1437 aa17.48■□□□□ 0.39
NPHP4-208ENST00000478423 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
NPHP4-208ENST00000478423 TMX4Q9H1E5 349 aaPredicted RBP17.47■□□□□ 0.39
NPHP4-208ENST00000478423 GOLGA6L3A6NEY3 463 aa17.47■□□□□ 0.39
NPHP4-208ENST00000478423 G3BP1Q13283 466 aaKnown RBP eCLIP17.47■□□□□ 0.39
NPHP4-208ENST00000478423 ANO2Q9NQ90 1003 aa17.47■□□□□ 0.39
NPHP4-208ENST00000478423 WDR63Q8IWG1 891 aa17.47■□□□□ 0.39
NPHP4-208ENST00000478423 NUDT16Q96DE0 195 aaKnown RBP17.47■□□□□ 0.39
NPHP4-208ENST00000478423 ATP10BO94823 1461 aa17.46■□□□□ 0.39
NPHP4-208ENST00000478423 UBTFL1P0CB47 393 aaPredicted RBP17.46■□□□□ 0.39
NPHP4-208ENST00000478423 RIC3Q7Z5B4 369 aa17.45■□□□□ 0.38
NPHP4-208ENST00000478423 RUFY2Q8WXA3 655 aa17.45■□□□□ 0.38
NPHP4-208ENST00000478423 USP35Q9P2H5 1018 aa17.45■□□□□ 0.38
NPHP4-208ENST00000478423 FANCAO15360 1455 aa17.45■□□□□ 0.38
NPHP4-208ENST00000478423 FOXD4L6Q3SYB3 417 aaPredicted RBP17.44■□□□□ 0.38
NPHP4-208ENST00000478423 FOXD4L3Q6VB84 417 aaPredicted RBP17.44■□□□□ 0.38
NPHP4-208ENST00000478423 CCDC30Q5VVM6 783 aa17.44■□□□□ 0.38
NPHP4-208ENST00000478423 NUP153P49790 1475 aaKnown RBP17.43■□□□□ 0.38
NPHP4-208ENST00000478423 PLEKHO1Q53GL0 409 aaPredicted RBP17.43■□□□□ 0.38
NPHP4-208ENST00000478423 NOB1Q9ULX3 412 aaKnown RBP17.43■□□□□ 0.38
NPHP4-208ENST00000478423 HSP90AB4PQ58FF6 505 aa17.43■□□□□ 0.38
NPHP4-208ENST00000478423 SMG6Q86US8 1419 aaKnown RBP17.43■□□□□ 0.38
NPHP4-208ENST00000478423 KIF3AQ9Y496 699 aa17.43■□□□□ 0.38
NPHP4-208ENST00000478423 ZKSCAN1P17029 563 aaPredicted RBP17.43■□□□□ 0.38
NPHP4-208ENST00000478423 WWC1Q8IX03 1113 aa17.43■□□□□ 0.38
NPHP4-208ENST00000478423 C22orf23Q9BZE7 217 aa17.42■□□□□ 0.38
NPHP4-208ENST00000478423 POGZQ7Z3K3 1410 aa17.42■□□□□ 0.38
NPHP4-208ENST00000478423 GNAI3P08754 354 aa17.42■□□□□ 0.38
NPHP4-208ENST00000478423 FCHSD2O94868 740 aa17.42■□□□□ 0.38
NPHP4-208ENST00000478423 C1orf115Q9H7X2 142 aa17.42■□□□□ 0.38
NPHP4-208ENST00000478423 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
NPHP4-208ENST00000478423 DDX49Q9Y6V7 483 aaKnown RBP17.42■□□□□ 0.38
NPHP4-208ENST00000478423 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
NPHP4-208ENST00000478423 INTS3Q68E01 1043 aaKnown RBP17.41■□□□□ 0.38
NPHP4-208ENST00000478423 DHX29Q7Z478 1369 aaKnown RBP17.41■□□□□ 0.38
NPHP4-208ENST00000478423 DDX11L8A8MPP1 907 aa17.41■□□□□ 0.38
NPHP4-208ENST00000478423 ATF7IPQ6VMQ6 1270 aa17.41■□□□□ 0.38
NPHP4-208ENST00000478423 TMPOP42166 694 aaKnown RBP17.4■□□□□ 0.38
NPHP4-208ENST00000478423 CSPP1Q1MSJ5 1256 aa17.4■□□□□ 0.38
NPHP4-208ENST00000478423 HDGFL1Q5TGJ6 251 aa17.4■□□□□ 0.38
NPHP4-208ENST00000478423 G3V3G9 751 aa17.39■□□□□ 0.38
NPHP4-208ENST00000478423 SLFN5Q08AF3 891 aa17.39■□□□□ 0.38
NPHP4-208ENST00000478423 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.38
NPHP4-208ENST00000478423 SURF6O75683 361 aaKnown RBP17.39■□□□□ 0.37
NPHP4-208ENST00000478423 CHAF1AQ13111 956 aaPredicted RBP17.39■□□□□ 0.37
NPHP4-208ENST00000478423 UGGT2Q9NYU1 1516 aa17.39■□□□□ 0.37
NPHP4-208ENST00000478423 CT47B1P0C2W7 299 aaPredicted RBP17.39■□□□□ 0.37
NPHP4-208ENST00000478423 LRRFIP1Q32MZ4 808 aaKnown RBP17.39■□□□□ 0.37
NPHP4-208ENST00000478423 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
NPHP4-208ENST00000478423 CEBPAP49715 358 aaPredicted RBP17.38■□□□□ 0.37
NPHP4-208ENST00000478423 DENND4BO75064 1496 aaPredicted RBP17.38■□□□□ 0.37
NPHP4-208ENST00000478423 FAM184AQ8NB25 1140 aa17.37■□□□□ 0.37
NPHP4-208ENST00000478423 XPCQ01831 940 aaPredicted RBP17.37■□□□□ 0.37
NPHP4-208ENST00000478423 KIAA2012Q0VF49 1180 aa17.37■□□□□ 0.37
NPHP4-208ENST00000478423 SF3A1Q15459 793 aaKnown RBP17.37■□□□□ 0.37
NPHP4-208ENST00000478423 ERC2O15083 957 aa17.37■□□□□ 0.37
NPHP4-208ENST00000478423 CHMP5Q9NZZ3 219 aa17.37■□□□□ 0.37
NPHP4-208ENST00000478423 NOS1P29475 1434 aa17.36■□□□□ 0.37
NPHP4-208ENST00000478423 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
NPHP4-208ENST00000478423 RAPGEF6Q8TEU7 1601 aa17.36■□□□□ 0.37
NPHP4-208ENST00000478423 H3BQV1 296 aa17.36■□□□□ 0.37
NPHP4-208ENST00000478423 IFFO2Q5TF58 517 aa17.36■□□□□ 0.37
NPHP4-208ENST00000478423 CLASRPQ8N2M8 674 aaKnown RBP17.36■□□□□ 0.37
NPHP4-208ENST00000478423 C14orf93Q9H972 538 aaKnown RBP17.36■□□□□ 0.37
NPHP4-208ENST00000478423 CDC45O75419 566 aa17.35■□□□□ 0.37
NPHP4-208ENST00000478423 NEUROD6Q96NK8 337 aa17.35■□□□□ 0.37
NPHP4-208ENST00000478423 ATP6V1DQ9Y5K8 247 aa17.35■□□□□ 0.37
NPHP4-208ENST00000478423 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms