RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 C3P01024 1663 aa19.26■□□□□ 0.67
U2AF1-210ENST00000478282 AMER1Q5JTC6 1135 aaPredicted RBP19.26■□□□□ 0.67
U2AF1-210ENST00000478282 IQGAP1P46940 1657 aa19.26■□□□□ 0.67
U2AF1-210ENST00000478282 PIK3C2GO75747 1445 aa19.25■□□□□ 0.67
U2AF1-210ENST00000478282 TRMT2AQ8IZ69 625 aaKnown RBP19.25■□□□□ 0.67
U2AF1-210ENST00000478282 KIF1BO60333 1816 aa19.24■□□□□ 0.67
U2AF1-210ENST00000478282 IFT172Q9UG01 1749 aa19.24■□□□□ 0.67
U2AF1-210ENST00000478282 NKTRP30414 1462 aaKnown RBP19.23■□□□□ 0.67
U2AF1-210ENST00000478282 ASXL1Q8IXJ9 1541 aa19.23■□□□□ 0.67
U2AF1-210ENST00000478282 ADGRB3O60242 1522 aa19.23■□□□□ 0.67
U2AF1-210ENST00000478282 MADDQ8WXG6 1647 aa19.23■□□□□ 0.67
U2AF1-210ENST00000478282 UGGT1Q9NYU2 1555 aa19.22■□□□□ 0.67
U2AF1-210ENST00000478282 KDM5AP29375 1690 aaKnown RBP19.22■□□□□ 0.67
U2AF1-210ENST00000478282 ZMYM3Q14202 1370 aa19.22■□□□□ 0.67
U2AF1-210ENST00000478282 CFAP65Q6ZU64 1925 aaKnown RBP19.21■□□□□ 0.67
U2AF1-210ENST00000478282 USP19O94966 1318 aa19.19■□□□□ 0.66
U2AF1-210ENST00000478282 TMEM131LA2VDJ0 1609 aa19.19■□□□□ 0.66
U2AF1-210ENST00000478282 MYOM1P52179 1685 aa19.19■□□□□ 0.66
U2AF1-210ENST00000478282 CDCA8Q53HL2 280 aa19.18■□□□□ 0.66
U2AF1-210ENST00000478282 NPC1L1Q9UHC9 1359 aa19.18■□□□□ 0.66
U2AF1-210ENST00000478282 FAM43AQ8N2R8 423 aa19.18■□□□□ 0.66
U2AF1-210ENST00000478282 SPINK5Q9NQ38 1064 aaPredicted RBP19.18■□□□□ 0.66
U2AF1-210ENST00000478282 BCAR3O75815 825 aa19.17■□□□□ 0.66
U2AF1-210ENST00000478282 CCDC146Q8IYE0 955 aa19.17■□□□□ 0.66
U2AF1-210ENST00000478282 RIMS1Q86UR5 1692 aaKnown RBP19.17■□□□□ 0.66
U2AF1-210ENST00000478282 IGHDP01880 384 aa19.16■□□□□ 0.66
U2AF1-210ENST00000478282 E9PSI1 815 aa19.15■□□□□ 0.66
U2AF1-210ENST00000478282 CGNL1Q0VF96 1302 aa19.15■□□□□ 0.66
U2AF1-210ENST00000478282 APAF1O14727 1248 aa19.15■□□□□ 0.66
U2AF1-210ENST00000478282 PPLO60437 1756 aa19.15■□□□□ 0.66
U2AF1-210ENST00000478282 MAPK8IP3Q9UPT6 1336 aa19.14■□□□□ 0.66
U2AF1-210ENST00000478282 MLECQ14165 292 aa19.14■□□□□ 0.65
U2AF1-210ENST00000478282 SCAF11Q99590 1463 aaKnown RBP19.14■□□□□ 0.65
U2AF1-210ENST00000478282 NINLQ9Y2I6 1382 aa19.13■□□□□ 0.65
U2AF1-210ENST00000478282 MYO5BQ9ULV0 1848 aa19.13■□□□□ 0.65
U2AF1-210ENST00000478282 PDE3AQ14432 1141 aa19.12■□□□□ 0.65
U2AF1-210ENST00000478282 BECN1Q14457 450 aa19.12■□□□□ 0.65
U2AF1-210ENST00000478282 SLC52A1Q9NWF4 448 aa19.12■□□□□ 0.65
U2AF1-210ENST00000478282 NLRP1Q9C000 1473 aa19.11■□□□□ 0.65
U2AF1-210ENST00000478282 NRXN1Q9ULB1 1477 aa19.11■□□□□ 0.65
U2AF1-210ENST00000478282 FBXO31Q5XUX0 539 aaPredicted RBP19.11■□□□□ 0.65
U2AF1-210ENST00000478282 MYOM2P54296 1465 aa19.11■□□□□ 0.65
U2AF1-210ENST00000478282 NGEFQ8N5V2 710 aa19.1■□□□□ 0.65
U2AF1-210ENST00000478282 SEC24BO95487 1268 aa19.1■□□□□ 0.65
U2AF1-210ENST00000478282 CLUAP1Q96AJ1 413 aa19.1■□□□□ 0.65
U2AF1-210ENST00000478282 RSPH6AQ9H0K4 717 aa19.1■□□□□ 0.65
U2AF1-210ENST00000478282 POGKQ9P215 609 aa19.1■□□□□ 0.65
U2AF1-210ENST00000478282 UBR1Q8IWV7 1749 aa19.09■□□□□ 0.65
U2AF1-210ENST00000478282 NEXMIFQ5QGS0 1516 aa19.09■□□□□ 0.65
U2AF1-210ENST00000478282 EIF5BO60841 1220 aaKnown RBP19.08■□□□□ 0.65
U2AF1-210ENST00000478282 UBE2Q2Q8WVN8 375 aa19.08■□□□□ 0.65
U2AF1-210ENST00000478282 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.65
U2AF1-210ENST00000478282 MYO3AQ8NEV4 1616 aa19.08■□□□□ 0.64
U2AF1-210ENST00000478282 ZNF142P52746 1687 aaPredicted RBP19.07■□□□□ 0.64
U2AF1-210ENST00000478282 CENPJQ9HC77 1338 aaPredicted RBP19.07■□□□□ 0.64
U2AF1-210ENST00000478282 KIAA1210Q9ULL0 1709 aa19.07■□□□□ 0.64
U2AF1-210ENST00000478282 STAC3Q96MF2 364 aa19.07■□□□□ 0.64
U2AF1-210ENST00000478282 IDI1Q13907 227 aa19.07■□□□□ 0.64
U2AF1-210ENST00000478282 TNRQ92752 1358 aa19.06■□□□□ 0.64
U2AF1-210ENST00000478282 A2ML1A8K2U0 1454 aa19.05■□□□□ 0.64
U2AF1-210ENST00000478282 COG6Q9Y2V7 657 aa19.05■□□□□ 0.64
U2AF1-210ENST00000478282 PANK1Q8TE04 598 aa19.05■□□□□ 0.64
U2AF1-210ENST00000478282 SLKQ9H2G2 1235 aaPredicted RBP19.05■□□□□ 0.64
U2AF1-210ENST00000478282 ESF1Q9H501 851 aaKnown RBP19.05■□□□□ 0.64
U2AF1-210ENST00000478282 ZFYVE9O95405 1425 aa19.05■□□□□ 0.64
U2AF1-210ENST00000478282 CANXP27824 592 aaKnown RBP19.04■□□□□ 0.64
U2AF1-210ENST00000478282 ANTXR1Q9H6X2 564 aa19.04■□□□□ 0.64
U2AF1-210ENST00000478282 L1TD1Q5T7N2 865 aaKnown RBP19.03■□□□□ 0.64
U2AF1-210ENST00000478282 RPGRIP1LQ68CZ1 1315 aa19.03■□□□□ 0.64
U2AF1-210ENST00000478282 PTPRMP28827 1452 aa19.03■□□□□ 0.64
U2AF1-210ENST00000478282 WWC1Q8IX03 1113 aa19■□□□□ 0.63
U2AF1-210ENST00000478282 PMFBP1Q8TBY8 1022 aa19■□□□□ 0.63
U2AF1-210ENST00000478282 AAMPQ13685 434 aa19■□□□□ 0.63
U2AF1-210ENST00000478282 UPF2Q9HAU5 1272 aaKnown RBP19■□□□□ 0.63
U2AF1-210ENST00000478282 TBC1D32Q96NH3 1257 aa19■□□□□ 0.63
U2AF1-210ENST00000478282 SETD1BQ9UPS6 1966 aaKnown RBP18.99■□□□□ 0.63
U2AF1-210ENST00000478282 POLR3AO14802 1390 aaPredicted RBP18.98■□□□□ 0.63
U2AF1-210ENST00000478282 SLIT1O75093 1534 aa18.98■□□□□ 0.63
U2AF1-210ENST00000478282 CEBPAP49715 358 aaPredicted RBP18.98■□□□□ 0.63
U2AF1-210ENST00000478282 ARHGAP23Q9P227 1491 aa18.97■□□□□ 0.63
U2AF1-210ENST00000478282 CEP170BQ9Y4F5 1589 aaPredicted RBP18.97■□□□□ 0.63
U2AF1-210ENST00000478282 TBC1D2Q9BYX2 928 aa18.97■□□□□ 0.63
U2AF1-210ENST00000478282 SLC24A1O60721 1099 aa18.96■□□□□ 0.63
U2AF1-210ENST00000478282 CARD14Q9BXL6 1004 aa18.96■□□□□ 0.63
U2AF1-210ENST00000478282 RRAGDQ9NQL2 400 aaPredicted RBP18.96■□□□□ 0.63
U2AF1-210ENST00000478282 SHPRHQ149N8 1683 aa18.96■□□□□ 0.63
U2AF1-210ENST00000478282 RARSP54136 660 aaKnown RBP18.95■□□□□ 0.62
U2AF1-210ENST00000478282 PCDHB15Q9Y5E8 787 aa18.95■□□□□ 0.62
U2AF1-210ENST00000478282 SETD1AO15047 1707 aaKnown RBP18.95■□□□□ 0.62
U2AF1-210ENST00000478282 SETBP1Q9Y6X0 1596 aa18.95■□□□□ 0.62
U2AF1-210ENST00000478282 PDZRN3Q9UPQ7 1066 aa18.94■□□□□ 0.62
U2AF1-210ENST00000478282 NRXN3Q9Y4C0 1643 aa18.93■□□□□ 0.62
U2AF1-210ENST00000478282 IQSEC2Q5JU85 1478 aa18.92■□□□□ 0.62
U2AF1-210ENST00000478282 RLBP1P12271 317 aa18.92■□□□□ 0.62
U2AF1-210ENST00000478282 KDM4FA0A1W2PPD8 638 aa18.92■□□□□ 0.62
U2AF1-210ENST00000478282 ADGRB1O14514 1584 aa18.9■□□□□ 0.62
U2AF1-210ENST00000478282 RUNDC1Q96C34 613 aa18.9■□□□□ 0.62
U2AF1-210ENST00000478282 FSD2A1L4K1 749 aa18.9■□□□□ 0.62
U2AF1-210ENST00000478282 PHF23Q9BUL5 403 aaPredicted RBP18.9■□□□□ 0.62
U2AF1-210ENST00000478282 RWDD1Q9H446 243 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms