RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 SPHKAPQ2M3C7 1700 aa14.55□□□□□ -0.08
TCTN3-205ENST00000478245 LOC105371045A0A1W2PR82 267 aa14.55□□□□□ -0.08
TCTN3-205ENST00000478245 PSDA5PKW4 1024 aaPredicted RBP14.54□□□□□ -0.08
TCTN3-205ENST00000478245 NPHP3Q7Z494 1330 aa14.54□□□□□ -0.08
TCTN3-205ENST00000478245 NUP155O75694 1391 aa14.54□□□□□ -0.08
TCTN3-205ENST00000478245 RALGAPBQ86X10 1494 aa14.54□□□□□ -0.08
TCTN3-205ENST00000478245 GLI3P10071 1580 aa14.53□□□□□ -0.08
TCTN3-205ENST00000478245 ESCO1Q5FWF5 840 aa14.53□□□□□ -0.08
TCTN3-205ENST00000478245 UNC5CLQ8IV45 518 aa14.53□□□□□ -0.08
TCTN3-205ENST00000478245 XPCQ01831 940 aaPredicted RBP14.52□□□□□ -0.09
TCTN3-205ENST00000478245 HRCP23327 699 aa14.51□□□□□ -0.09
TCTN3-205ENST00000478245 SEPT12Q8IYM1 358 aa14.51□□□□□ -0.09
TCTN3-205ENST00000478245 KIF1BO60333 1816 aa14.5□□□□□ -0.09
TCTN3-205ENST00000478245 ROBO2Q9HCK4 1378 aa14.5□□□□□ -0.09
TCTN3-205ENST00000478245 FOXO3O43524 673 aa14.5□□□□□ -0.09
TCTN3-205ENST00000478245 PXDNQ92626 1479 aa14.5□□□□□ -0.09
TCTN3-205ENST00000478245 BAG6P46379 1132 aa14.49□□□□□ -0.09
TCTN3-205ENST00000478245 CCDC9Q9Y3X0 531 aaKnown RBP14.49□□□□□ -0.09
TCTN3-205ENST00000478245 NEXMIFQ5QGS0 1516 aa14.49□□□□□ -0.09
TCTN3-205ENST00000478245 SLIT2O94813 1529 aa14.48□□□□□ -0.09
TCTN3-205ENST00000478245 LRPPRCP42704 1394 aaKnown RBP14.47□□□□□ -0.09
TCTN3-205ENST00000478245 HAP1P54257 671 aaPredicted RBP14.47□□□□□ -0.09
TCTN3-205ENST00000478245 KRT27Q7Z3Y8 459 aa14.47□□□□□ -0.09
TCTN3-205ENST00000478245 HFM1A2PYH4 1435 aa14.47□□□□□ -0.09
TCTN3-205ENST00000478245 A0A0G2JS52 829 aa14.46□□□□□ -0.09
TCTN3-205ENST00000478245 MYT1Q01538 1121 aa14.46□□□□□ -0.09
TCTN3-205ENST00000478245 CLTCL1P53675 1640 aa14.45□□□□□ -0.1
TCTN3-205ENST00000478245 VGFO15240 615 aaPredicted RBP14.45□□□□□ -0.1
TCTN3-205ENST00000478245 ROCK1Q13464 1354 aa14.45□□□□□ -0.1
TCTN3-205ENST00000478245 USP32Q8NFA0 1604 aa14.44□□□□□ -0.1
TCTN3-205ENST00000478245 CDC42BPGQ6DT37 1551 aa14.44□□□□□ -0.1
TCTN3-205ENST00000478245 NUTM2FA1L443 756 aa14.43□□□□□ -0.1
TCTN3-205ENST00000478245 VPS72Q15906 364 aa14.43□□□□□ -0.1
TCTN3-205ENST00000478245 PLCH1Q4KWH8 1693 aa14.42□□□□□ -0.1
TCTN3-205ENST00000478245 NWD2Q9ULI1 1742 aa14.42□□□□□ -0.1
TCTN3-205ENST00000478245 YY1P25490 414 aa14.42□□□□□ -0.1
TCTN3-205ENST00000478245 R3HDM1Q15032 1099 aaKnown RBP14.42□□□□□ -0.1
TCTN3-205ENST00000478245 SPATA31A3Q5VYP0 1347 aa14.41□□□□□ -0.1
TCTN3-205ENST00000478245 RGPD1P0DJD0 1748 aa14.41□□□□□ -0.1
TCTN3-205ENST00000478245 ONECUT3O60422 494 aaPredicted RBP14.41□□□□□ -0.1
TCTN3-205ENST00000478245 PLEKHG5O94827 1062 aa14.41□□□□□ -0.1
TCTN3-205ENST00000478245 PRAG1Q86YV5 1406 aa14.41□□□□□ -0.1
TCTN3-205ENST00000478245 ITGAEP38570 1179 aa14.4□□□□□ -0.1
TCTN3-205ENST00000478245 EN1Q05925 392 aaPredicted RBP14.4□□□□□ -0.1
TCTN3-205ENST00000478245 NAIPQ13075 1403 aa14.39□□□□□ -0.11
TCTN3-205ENST00000478245 KIF1AQ12756 1690 aa14.39□□□□□ -0.11
TCTN3-205ENST00000478245 KRT28Q7Z3Y7 464 aa14.38□□□□□ -0.11
TCTN3-205ENST00000478245 CABLES1Q8TDN4 633 aa14.38□□□□□ -0.11
TCTN3-205ENST00000478245 CCDC144AA2RUR9 1427 aa14.38□□□□□ -0.11
TCTN3-205ENST00000478245 PPLO60437 1756 aa14.37□□□□□ -0.11
TCTN3-205ENST00000478245 FAM98CQ17RN3 349 aaKnown RBP14.36□□□□□ -0.11
TCTN3-205ENST00000478245 LMOD2Q6P5Q4 547 aa14.36□□□□□ -0.11
TCTN3-205ENST00000478245 STK26Q9P289 416 aa14.36□□□□□ -0.11
TCTN3-205ENST00000478245 RGPD8O14715 1765 aaPredicted RBP14.36□□□□□ -0.11
TCTN3-205ENST00000478245 PSME1Q06323 249 aa14.35□□□□□ -0.11
TCTN3-205ENST00000478245 RPGRIP1LQ68CZ1 1315 aa14.35□□□□□ -0.11
TCTN3-205ENST00000478245 FMN2Q9NZ56 1722 aa14.35□□□□□ -0.11
TCTN3-205ENST00000478245 TNS3Q68CZ2 1445 aa14.34□□□□□ -0.11
TCTN3-205ENST00000478245 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
TCTN3-205ENST00000478245 FAM182BQ5T319 152 aa14.34□□□□□ -0.11
TCTN3-205ENST00000478245 WAPLQ7Z5K2 1190 aa14.34□□□□□ -0.11
TCTN3-205ENST00000478245 ABCA3Q99758 1704 aa14.34□□□□□ -0.11
TCTN3-205ENST00000478245 TNS1Q9HBL0 1735 aaKnown RBP14.32□□□□□ -0.12
TCTN3-205ENST00000478245 FAM83GA6ND36 823 aa14.32□□□□□ -0.12
TCTN3-205ENST00000478245 EZH2Q15910 746 aaKnown RBP14.32□□□□□ -0.12
TCTN3-205ENST00000478245 NRAPQ86VF7 1730 aa14.3□□□□□ -0.12
TCTN3-205ENST00000478245 IFT172Q9UG01 1749 aa14.3□□□□□ -0.12
TCTN3-205ENST00000478245 BTG4Q9NY30 223 aa14.3□□□□□ -0.12
TCTN3-205ENST00000478245 PHF8Q9UPP1 1060 aa14.3□□□□□ -0.12
TCTN3-205ENST00000478245 ARHGEF10O15013 1369 aa14.3□□□□□ -0.12
TCTN3-205ENST00000478245 DISP2A7MBM2 1401 aa14.3□□□□□ -0.12
TCTN3-205ENST00000478245 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
TCTN3-205ENST00000478245 ADGRB2O60241 1585 aa14.29□□□□□ -0.12
TCTN3-205ENST00000478245 COL14A1Q05707 1796 aaKnown RBP14.27□□□□□ -0.12
TCTN3-205ENST00000478245 KNDC1Q76NI1 1749 aa14.27□□□□□ -0.12
TCTN3-205ENST00000478245 TECPR2O15040 1411 aa14.27□□□□□ -0.12
TCTN3-205ENST00000478245 SBNO1A3KN83 1393 aa14.27□□□□□ -0.12
TCTN3-205ENST00000478245 PLEKHH1Q9ULM0 1364 aa14.27□□□□□ -0.12
TCTN3-205ENST00000478245 TRIM37O94972 964 aa14.27□□□□□ -0.13
TCTN3-205ENST00000478245 CAMKK2Q96RR4 588 aa14.27□□□□□ -0.13
TCTN3-205ENST00000478245 APBA3O96018 575 aa14.26□□□□□ -0.13
TCTN3-205ENST00000478245 ABCC11Q96J66 1382 aa14.25□□□□□ -0.13
TCTN3-205ENST00000478245 SPATA31A5Q5VU36 1347 aa14.25□□□□□ -0.13
TCTN3-205ENST00000478245 SPATA31A7Q8IWB4 1347 aa14.25□□□□□ -0.13
TCTN3-205ENST00000478245 ADGRF5Q8IZF2 1346 aa14.25□□□□□ -0.13
TCTN3-205ENST00000478245 TMEM132EQ6IEE7 984 aa14.25□□□□□ -0.13
TCTN3-205ENST00000478245 PARD3Q8TEW0 1356 aa14.24□□□□□ -0.13
TCTN3-205ENST00000478245 NBPF8Q3BBV2 869 aa14.24□□□□□ -0.13
TCTN3-205ENST00000478245 NBPF14Q5TI25 921 aa14.24□□□□□ -0.13
TCTN3-205ENST00000478245 FAM196AQ6ZSG2 479 aa14.24□□□□□ -0.13
TCTN3-205ENST00000478245 THSD7AQ9UPZ6 1657 aa14.23□□□□□ -0.13
TCTN3-205ENST00000478245 SPON1Q9HCB6 807 aa14.23□□□□□ -0.13
TCTN3-205ENST00000478245 NRXN1Q9ULB1 1477 aa14.23□□□□□ -0.13
TCTN3-205ENST00000478245 RRBP1Q9P2E9 1410 aaKnown RBP14.23□□□□□ -0.13
TCTN3-205ENST00000478245 NUP188Q5SRE5 1749 aa14.22□□□□□ -0.13
TCTN3-205ENST00000478245 RREB1Q92766 1687 aa14.22□□□□□ -0.13
TCTN3-205ENST00000478245 RGL3Q3MIN7 710 aa14.21□□□□□ -0.13
TCTN3-205ENST00000478245 PMFBP1Q8TBY8 1022 aa14.21□□□□□ -0.13
TCTN3-205ENST00000478245 NINLQ9Y2I6 1382 aa14.21□□□□□ -0.14
TCTN3-205ENST00000478245 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms