RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 ESCO1Q5FWF5 840 aa27.85■■■□□ 2.05
PRKCD-204ENST00000477794 LRPPRCP42704 1394 aaKnown RBP27.84■■■□□ 2.05
PRKCD-204ENST00000477794 PPLO60437 1756 aa27.83■■■□□ 2.05
PRKCD-204ENST00000477794 ANKRD30BQ9BXX2 1392 aa27.83■■■□□ 2.05
PRKCD-204ENST00000477794 CDC42BPGQ6DT37 1551 aa27.82■■■□□ 2.04
PRKCD-204ENST00000477794 FOXD1Q16676 465 aa27.82■■■□□ 2.04
PRKCD-204ENST00000477794 ATAD2Q6PL18 1390 aa27.82■■■□□ 2.04
PRKCD-204ENST00000477794 FNBP4Q8N3X1 1017 aaPredicted RBP27.8■■■□□ 2.04
PRKCD-204ENST00000477794 ACIN1Q9UKV3 1341 aaKnown RBP27.78■■■□□ 2.04
PRKCD-204ENST00000477794 RGL3Q3MIN7 710 aa27.78■■■□□ 2.04
PRKCD-204ENST00000477794 STK26Q9P289 416 aa27.77■■■□□ 2.04
PRKCD-204ENST00000477794 ADGRF5Q8IZF2 1346 aa27.76■■■□□ 2.03
PRKCD-204ENST00000477794 TECPR2O15040 1411 aa27.75■■■□□ 2.03
PRKCD-204ENST00000477794 COL22A1Q8NFW1 1626 aaPredicted RBP27.75■■■□□ 2.03
PRKCD-204ENST00000477794 FOXO3O43524 673 aa27.75■■■□□ 2.03
PRKCD-204ENST00000477794 ABCC11Q96J66 1382 aa27.73■■■□□ 2.03
PRKCD-204ENST00000477794 MYOM2P54296 1465 aa27.73■■■□□ 2.03
PRKCD-204ENST00000477794 MPHOSPH9Q99550 1183 aa27.72■■■□□ 2.03
PRKCD-204ENST00000477794 PXDNQ92626 1479 aa27.71■■■□□ 2.03
PRKCD-204ENST00000477794 ATRNO75882 1429 aa27.71■■■□□ 2.03
PRKCD-204ENST00000477794 SPATA31E1Q6ZUB1 1445 aa27.71■■■□□ 2.03
PRKCD-204ENST00000477794 WAPLQ7Z5K2 1190 aa27.7■■■□□ 2.02
PRKCD-204ENST00000477794 XPCQ01831 940 aaPredicted RBP27.68■■■□□ 2.02
PRKCD-204ENST00000477794 NUTM2FA1L443 756 aa27.67■■■□□ 2.02
PRKCD-204ENST00000477794 PIK3C2GO75747 1445 aa27.67■■■□□ 2.02
PRKCD-204ENST00000477794 CCDC125Q86Z20 511 aa27.66■■■□□ 2.02
PRKCD-204ENST00000477794 TMEM132EQ6IEE7 984 aa27.65■■■□□ 2.02
PRKCD-204ENST00000477794 SIRT1Q96EB6 747 aa27.64■■■□□ 2.02
PRKCD-204ENST00000477794 YTHDC2Q9H6S0 1430 aaKnown RBP27.64■■■□□ 2.02
PRKCD-204ENST00000477794 KNDC1Q76NI1 1749 aa27.62■■■□□ 2.01
PRKCD-204ENST00000477794 HAP1P54257 671 aaPredicted RBP27.62■■■□□ 2.01
PRKCD-204ENST00000477794 GJD4Q96KN9 370 aaPredicted RBP27.62■■■□□ 2.01
PRKCD-204ENST00000477794 BCL9LQ86UU0 1499 aa27.62■■■□□ 2.01
PRKCD-204ENST00000477794 PSME1Q06323 249 aa27.61■■■□□ 2.01
PRKCD-204ENST00000477794 KIF1AQ12756 1690 aa27.61■■■□□ 2.01
PRKCD-204ENST00000477794 SPATA31A3Q5VYP0 1347 aa27.61■■■□□ 2.01
PRKCD-204ENST00000477794 ZRANB1Q9UGI0 708 aa27.6■■■□□ 2.01
PRKCD-204ENST00000477794 IFT172Q9UG01 1749 aa27.6■■■□□ 2.01
PRKCD-204ENST00000477794 DHX57Q6P158 1386 aaKnown RBP27.6■■■□□ 2.01
PRKCD-204ENST00000477794 PLEKHH1Q9ULM0 1364 aa27.59■■■□□ 2.01
PRKCD-204ENST00000477794 KRT28Q7Z3Y7 464 aa27.58■■■□□ 2.01
PRKCD-204ENST00000477794 UNC5CLQ8IV45 518 aa27.58■■■□□ 2.01
PRKCD-204ENST00000477794 C14orf93Q9H972 538 aaKnown RBP27.58■■■□□ 2.01
PRKCD-204ENST00000477794 FMN2Q9NZ56 1722 aa27.56■■■□□ 2
PRKCD-204ENST00000477794 MARF1Q9Y4F3 1742 aaKnown RBP27.56■■■□□ 2
PRKCD-204ENST00000477794 SRCAPQ6ZRS2 3230 aa27.56■■■□□ 2
PRKCD-204ENST00000477794 PHF8Q9UPP1 1060 aa27.55■■■□□ 2
PRKCD-204ENST00000477794 EP400Q96L91 3159 aa27.54■■■□□ 2
PRKCD-204ENST00000477794 TNS3Q68CZ2 1445 aa27.51■■□□□ 1.99
PRKCD-204ENST00000477794 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.51■■□□□ 1.99
PRKCD-204ENST00000477794 SLIT2O94813 1529 aa27.51■■□□□ 1.99
PRKCD-204ENST00000477794 ARHGEF10O15013 1369 aa27.5■■□□□ 1.99
PRKCD-204ENST00000477794 POGKQ9P215 609 aa27.5■■□□□ 1.99
PRKCD-204ENST00000477794 CFAP70Q5T0N1 1121 aa27.49■■□□□ 1.99
PRKCD-204ENST00000477794 PRAM1Q96QH2 718 aa27.49■■□□□ 1.99
PRKCD-204ENST00000477794 NRXN1Q9ULB1 1477 aa27.49■■□□□ 1.99
PRKCD-204ENST00000477794 SBNO1A3KN83 1393 aa27.48■■□□□ 1.99
PRKCD-204ENST00000477794 LMOD2Q6P5Q4 547 aa27.48■■□□□ 1.99
PRKCD-204ENST00000477794 RALGAPBQ86X10 1494 aa27.48■■□□□ 1.99
PRKCD-204ENST00000477794 USP32Q8NFA0 1604 aa27.48■■□□□ 1.99
PRKCD-204ENST00000477794 SF3B2Q13435 895 aaKnown RBP27.46■■□□□ 1.99
PRKCD-204ENST00000477794 ANKARQ7Z5J8 1434 aa27.45■■□□□ 1.98
PRKCD-204ENST00000477794 SAFB2Q14151 953 aaKnown RBP eCLIP27.45■■□□□ 1.98
PRKCD-204ENST00000477794 CCDC9Q9Y3X0 531 aaKnown RBP27.45■■□□□ 1.98
PRKCD-204ENST00000477794 EIF3AQ14152 1382 aaKnown RBP27.45■■□□□ 1.98
PRKCD-204ENST00000477794 BLMP54132 1417 aaPredicted RBP27.44■■□□□ 1.98
PRKCD-204ENST00000477794 VPS72Q15906 364 aa27.44■■□□□ 1.98
PRKCD-204ENST00000477794 DLC1Q96QB1 1528 aa27.41■■□□□ 1.98
PRKCD-204ENST00000477794 GLI3P10071 1580 aa27.4■■□□□ 1.98
PRKCD-204ENST00000477794 GPRASP1Q5JY77 1395 aa27.4■■□□□ 1.98
PRKCD-204ENST00000477794 SEPT12Q8IYM1 358 aa27.4■■□□□ 1.98
PRKCD-204ENST00000477794 CABLES1Q8TDN4 633 aa27.4■■□□□ 1.98
PRKCD-204ENST00000477794 PLEKHG5O94827 1062 aa27.39■■□□□ 1.98
PRKCD-204ENST00000477794 STAC3Q96MF2 364 aa27.38■■□□□ 1.97
PRKCD-204ENST00000477794 PMFBP1Q8TBY8 1022 aa27.36■■□□□ 1.97
PRKCD-204ENST00000477794 NWD2Q9ULI1 1742 aa27.36■■□□□ 1.97
PRKCD-204ENST00000477794 A0A0G2JS52 829 aa27.35■■□□□ 1.97
PRKCD-204ENST00000477794 MYT1Q01538 1121 aa27.35■■□□□ 1.97
PRKCD-204ENST00000477794 ADGRB2O60241 1585 aa27.35■■□□□ 1.97
PRKCD-204ENST00000477794 ONECUT3O60422 494 aaPredicted RBP27.34■■□□□ 1.97
PRKCD-204ENST00000477794 KRT27Q7Z3Y8 459 aa27.34■■□□□ 1.97
PRKCD-204ENST00000477794 RAB3GAP2Q9H2M9 1393 aa27.34■■□□□ 1.97
PRKCD-204ENST00000477794 RGPD8O14715 1765 aaPredicted RBP27.33■■□□□ 1.97
PRKCD-204ENST00000477794 TRAK1Q9UPV9 953 aa27.33■■□□□ 1.97
PRKCD-204ENST00000477794 PLCH1Q4KWH8 1693 aa27.3■■□□□ 1.96
PRKCD-204ENST00000477794 FAM83GA6ND36 823 aa27.3■■□□□ 1.96
PRKCD-204ENST00000477794 HIRIP3Q9BW71 556 aaPredicted RBP27.3■■□□□ 1.96
PRKCD-204ENST00000477794 DCAF11Q8TEB1 546 aa27.29■■□□□ 1.96
PRKCD-204ENST00000477794 MINK1Q8N4C8 1332 aaPredicted RBP27.29■■□□□ 1.96
PRKCD-204ENST00000477794 ADGRB1O14514 1584 aa27.28■■□□□ 1.96
PRKCD-204ENST00000477794 NGDNQ8NEJ9 315 aaKnown RBP27.28■■□□□ 1.96
PRKCD-204ENST00000477794 KDM2AQ9Y2K7 1162 aa27.28■■□□□ 1.96
PRKCD-204ENST00000477794 WASLO00401 505 aaPredicted RBP27.27■■□□□ 1.96
PRKCD-204ENST00000477794 BTG4Q9NY30 223 aa27.27■■□□□ 1.96
PRKCD-204ENST00000477794 TULP4Q9NRJ4 1543 aa27.26■■□□□ 1.96
PRKCD-204ENST00000477794 DEFB132Q7Z7B7 95 aa27.26■■□□□ 1.95
PRKCD-204ENST00000477794 ABCA3Q99758 1704 aa27.26■■□□□ 1.95
PRKCD-204ENST00000477794 BAG6P46379 1132 aa27.25■■□□□ 1.95
PRKCD-204ENST00000477794 PAK3O75914 559 aaPredicted RBP27.24■■□□□ 1.95
PRKCD-204ENST00000477794 BRWD3Q6RI45 1802 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms