RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 WAPLQ7Z5K2 1190 aa18.71■□□□□ 0.59
TOP3A-205ENST00000477508 ROCK2O75116 1388 aaKnown RBP18.7■□□□□ 0.58
TOP3A-205ENST00000477508 PRAM1Q96QH2 718 aa18.7■□□□□ 0.58
TOP3A-205ENST00000477508 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.69■□□□□ 0.58
TOP3A-205ENST00000477508 SLAIN2Q9P270 581 aa18.68■□□□□ 0.58
TOP3A-205ENST00000477508 GPRASP1Q5JY77 1395 aa18.68■□□□□ 0.58
TOP3A-205ENST00000477508 RALGAPBQ86X10 1494 aa18.67■□□□□ 0.58
TOP3A-205ENST00000477508 NALCNQ8IZF0 1738 aa18.66■□□□□ 0.58
TOP3A-205ENST00000477508 PIP4K2BP78356 416 aa18.66■□□□□ 0.58
TOP3A-205ENST00000477508 PLEKHH1Q9ULM0 1364 aa18.66■□□□□ 0.58
TOP3A-205ENST00000477508 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
TOP3A-205ENST00000477508 CARD11Q9BXL7 1154 aa18.64■□□□□ 0.57
TOP3A-205ENST00000477508 EIF3AQ14152 1382 aaKnown RBP18.64■□□□□ 0.57
TOP3A-205ENST00000477508 CDC42BPGQ6DT37 1551 aa18.64■□□□□ 0.57
TOP3A-205ENST00000477508 ARHGEF28Q8N1W1 1705 aaKnown RBP18.63■□□□□ 0.57
TOP3A-205ENST00000477508 SAFB2Q14151 953 aaKnown RBP eCLIP18.62■□□□□ 0.57
TOP3A-205ENST00000477508 CENPJQ9HC77 1338 aaPredicted RBP18.61■□□□□ 0.57
TOP3A-205ENST00000477508 MST1RQ04912 1400 aa18.6■□□□□ 0.57
TOP3A-205ENST00000477508 ADGRB2O60241 1585 aa18.59■□□□□ 0.57
TOP3A-205ENST00000477508 MINK1Q8N4C8 1332 aaPredicted RBP18.58■□□□□ 0.57
TOP3A-205ENST00000477508 C1orf167Q5SNV9 1468 aa18.57■□□□□ 0.56
TOP3A-205ENST00000477508 WASLO00401 505 aaPredicted RBP18.56■□□□□ 0.56
TOP3A-205ENST00000477508 SLC24A1O60721 1099 aa18.56■□□□□ 0.56
TOP3A-205ENST00000477508 ROBO1Q9Y6N7 1651 aa18.56■□□□□ 0.56
TOP3A-205ENST00000477508 HIRIP3Q9BW71 556 aaPredicted RBP18.55■□□□□ 0.56
TOP3A-205ENST00000477508 FMN2Q9NZ56 1722 aa18.54■□□□□ 0.56
TOP3A-205ENST00000477508 BRINP3Q76B58 766 aa18.54■□□□□ 0.56
TOP3A-205ENST00000477508 ANKARQ7Z5J8 1434 aa18.54■□□□□ 0.56
TOP3A-205ENST00000477508 QRICH2Q9H0J4 1663 aa18.53■□□□□ 0.56
TOP3A-205ENST00000477508 SBNO2Q9Y2G9 1366 aa18.53■□□□□ 0.56
TOP3A-205ENST00000477508 KCNA4P22459 653 aa18.52■□□□□ 0.56
TOP3A-205ENST00000477508 DISP3Q9P2K9 1392 aa18.52■□□□□ 0.55
TOP3A-205ENST00000477508 HSPA1LP34931 641 aa18.51■□□□□ 0.55
TOP3A-205ENST00000477508 ESCO1Q5FWF5 840 aa18.51■□□□□ 0.55
TOP3A-205ENST00000477508 CDK19Q9BWU1 502 aa18.51■□□□□ 0.55
TOP3A-205ENST00000477508 EVC2Q86UK5 1308 aa18.5■□□□□ 0.55
TOP3A-205ENST00000477508 NUTM2FA1L443 756 aa18.5■□□□□ 0.55
TOP3A-205ENST00000477508 ORAI2Q96SN7 254 aa18.5■□□□□ 0.55
TOP3A-205ENST00000477508 TULP4Q9NRJ4 1543 aa18.49■□□□□ 0.55
TOP3A-205ENST00000477508 USP47Q96K76 1375 aa18.49■□□□□ 0.55
TOP3A-205ENST00000477508 AHDC1Q5TGY3 1603 aaPredicted RBP18.48■□□□□ 0.55
TOP3A-205ENST00000477508 SRPK2P78362 688 aaKnown RBP18.47■□□□□ 0.55
TOP3A-205ENST00000477508 NUDT16Q96DE0 195 aaKnown RBP18.47■□□□□ 0.55
TOP3A-205ENST00000477508 NPHP3Q7Z494 1330 aa18.47■□□□□ 0.55
TOP3A-205ENST00000477508 ST20-MTHFSA0A0A6YYL1 179 aa18.46■□□□□ 0.55
TOP3A-205ENST00000477508 PPP4R3CPQ6ZMV5 832 aa18.46■□□□□ 0.55
TOP3A-205ENST00000477508 ILDR2Q71H61 639 aa18.46■□□□□ 0.55
TOP3A-205ENST00000477508 PHF8Q9UPP1 1060 aa18.46■□□□□ 0.55
TOP3A-205ENST00000477508 CCDC61Q9Y6R9 512 aa18.46■□□□□ 0.55
TOP3A-205ENST00000477508 KIF1AQ12756 1690 aa18.46■□□□□ 0.55
TOP3A-205ENST00000477508 PHLPP1O60346 1717 aa18.45■□□□□ 0.54
TOP3A-205ENST00000477508 NHSL1Q5SYE7 1610 aa18.45■□□□□ 0.54
TOP3A-205ENST00000477508 RGPD8O14715 1765 aaPredicted RBP18.44■□□□□ 0.54
TOP3A-205ENST00000477508 PRR36Q9H6K5 1346 aa18.44■□□□□ 0.54
TOP3A-205ENST00000477508 USP32Q8NFA0 1604 aa18.43■□□□□ 0.54
TOP3A-205ENST00000477508 EIF4G2P78344 907 aaKnown RBP eCLIP18.43■□□□□ 0.54
TOP3A-205ENST00000477508 PUS7Q96PZ0 661 aaKnown RBP18.43■□□□□ 0.54
TOP3A-205ENST00000477508 ATP7BP35670 1465 aa18.43■□□□□ 0.54
TOP3A-205ENST00000477508 ITSN1Q15811 1721 aa18.43■□□□□ 0.54
TOP3A-205ENST00000477508 SOCS7O14512 581 aa18.42■□□□□ 0.54
TOP3A-205ENST00000477508 FOXO3O43524 673 aa18.42■□□□□ 0.54
TOP3A-205ENST00000477508 LRRC59Q96AG4 307 aaKnown RBP18.42■□□□□ 0.54
TOP3A-205ENST00000477508 TESK2Q96S53 571 aa18.42■□□□□ 0.54
TOP3A-205ENST00000477508 CABP2Q9NPB3 220 aa18.42■□□□□ 0.54
TOP3A-205ENST00000477508 SOS2Q07890 1332 aaPredicted RBP18.42■□□□□ 0.54
TOP3A-205ENST00000477508 ATAD2Q6PL18 1390 aa18.41■□□□□ 0.54
TOP3A-205ENST00000477508 PLEKHG3A1L390 1219 aa18.4■□□□□ 0.54
TOP3A-205ENST00000477508 TMF1P82094 1093 aa18.4■□□□□ 0.54
TOP3A-205ENST00000477508 PSME1Q06323 249 aa18.4■□□□□ 0.54
TOP3A-205ENST00000477508 COL16A1Q07092 1604 aaPredicted RBP18.4■□□□□ 0.54
TOP3A-205ENST00000477508 CDCA8Q53HL2 280 aa18.39■□□□□ 0.53
TOP3A-205ENST00000477508 NGDNQ8NEJ9 315 aaKnown RBP18.39■□□□□ 0.53
TOP3A-205ENST00000477508 PMFBP1Q8TBY8 1022 aa18.39■□□□□ 0.53
TOP3A-205ENST00000477508 JCADQ9P266 1359 aa18.39■□□□□ 0.53
TOP3A-205ENST00000477508 DDX17Q92841 729 aaKnown RBP18.38■□□□□ 0.53
TOP3A-205ENST00000477508 MSH5O43196 834 aa18.37■□□□□ 0.53
TOP3A-205ENST00000477508 KRT28Q7Z3Y7 464 aa18.37■□□□□ 0.53
TOP3A-205ENST00000477508 PPIP5K1Q6PFW1 1433 aa18.36■□□□□ 0.53
TOP3A-205ENST00000477508 TOPAZ1Q8N9V7 1692 aa18.36■□□□□ 0.53
TOP3A-205ENST00000477508 PXDNQ92626 1479 aa18.36■□□□□ 0.53
TOP3A-205ENST00000477508 POLR3AO14802 1390 aaPredicted RBP18.35■□□□□ 0.53
TOP3A-205ENST00000477508 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
TOP3A-205ENST00000477508 SBNO1A3KN83 1393 aa18.34■□□□□ 0.53
TOP3A-205ENST00000477508 ACEP12821 1306 aa18.34■□□□□ 0.53
TOP3A-205ENST00000477508 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
TOP3A-205ENST00000477508 CABP1Q9NZU7 370 aa18.34■□□□□ 0.53
TOP3A-205ENST00000477508 SPATA31A6Q5VVP1 1343 aa18.33■□□□□ 0.53
TOP3A-205ENST00000477508 ZNF692Q9BU19 519 aaPredicted RBP18.33■□□□□ 0.52
TOP3A-205ENST00000477508 BRD4O60885 1362 aaPredicted RBP18.32■□□□□ 0.52
TOP3A-205ENST00000477508 NINLQ9Y2I6 1382 aa18.32■□□□□ 0.52
TOP3A-205ENST00000477508 XPCQ01831 940 aaPredicted RBP18.32■□□□□ 0.52
TOP3A-205ENST00000477508 SHPRHQ149N8 1683 aa18.31■□□□□ 0.52
TOP3A-205ENST00000477508 SPATA31A3Q5VYP0 1347 aa18.31■□□□□ 0.52
TOP3A-205ENST00000477508 ARHGEF10O15013 1369 aa18.3■□□□□ 0.52
TOP3A-205ENST00000477508 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
TOP3A-205ENST00000477508 TMC1Q8TDI8 760 aa18.29■□□□□ 0.52
TOP3A-205ENST00000477508 TNS3Q68CZ2 1445 aa18.29■□□□□ 0.52
TOP3A-205ENST00000477508 TERF2IPQ9NYB0 399 aa18.28■□□□□ 0.52
TOP3A-205ENST00000477508 HDGFL2Q7Z4V5 671 aaPredicted RBP18.27■□□□□ 0.52
TOP3A-205ENST00000477508 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms