RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 YTHDC2Q9H6S0 1430 aaKnown RBP20.8■□□□□ 0.92
LINC00996-201ENST00000477392 A2ML1A8K2U0 1454 aa20.8■□□□□ 0.92
LINC00996-201ENST00000477392 SETD1AO15047 1707 aaKnown RBP20.79■□□□□ 0.92
LINC00996-201ENST00000477392 ANKRD36BQ8N2N9 1353 aa20.79■□□□□ 0.92
LINC00996-201ENST00000477392 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
LINC00996-201ENST00000477392 STK26Q9P289 416 aa20.77■□□□□ 0.92
LINC00996-201ENST00000477392 CCDC136Q96JN2 1154 aa20.76■□□□□ 0.91
LINC00996-201ENST00000477392 SAFB2Q14151 953 aaKnown RBP eCLIP20.75■□□□□ 0.91
LINC00996-201ENST00000477392 MORC1Q86VD1 984 aa20.75■□□□□ 0.91
LINC00996-201ENST00000477392 CCDC146Q8IYE0 955 aa20.75■□□□□ 0.91
LINC00996-201ENST00000477392 CABP2Q9NPB3 220 aa20.75■□□□□ 0.91
LINC00996-201ENST00000477392 CGNL1Q0VF96 1302 aa20.74■□□□□ 0.91
LINC00996-201ENST00000477392 DUSP27Q5VZP5 1158 aa20.73■□□□□ 0.91
LINC00996-201ENST00000477392 EXOC6Q8TAG9 804 aa20.73■□□□□ 0.91
LINC00996-201ENST00000477392 NINLQ9Y2I6 1382 aa20.73■□□□□ 0.91
LINC00996-201ENST00000477392 MLECQ14165 292 aa20.73■□□□□ 0.91
LINC00996-201ENST00000477392 NSD2O96028 1365 aa20.73■□□□□ 0.91
LINC00996-201ENST00000477392 RIMS2Q9UQ26 1411 aa20.73■□□□□ 0.91
LINC00996-201ENST00000477392 STAG3Q9UJ98 1225 aa20.72■□□□□ 0.91
LINC00996-201ENST00000477392 PRAM1Q96QH2 718 aa20.71■□□□□ 0.91
LINC00996-201ENST00000477392 NRXN3Q9Y4C0 1643 aa20.71■□□□□ 0.91
LINC00996-201ENST00000477392 DLC1Q96QB1 1528 aa20.71■□□□□ 0.91
LINC00996-201ENST00000477392 A0A1W2PP64 1363 aa20.71■□□□□ 0.91
LINC00996-201ENST00000477392 GOLGA2Q08379 1002 aa20.71■□□□□ 0.91
LINC00996-201ENST00000477392 APAF1O14727 1248 aa20.7■□□□□ 0.9
LINC00996-201ENST00000477392 ANKRD26Q9UPS8 1709 aa20.7■□□□□ 0.9
LINC00996-201ENST00000477392 ABCC11Q96J66 1382 aa20.69■□□□□ 0.9
LINC00996-201ENST00000477392 MINK1Q8N4C8 1332 aaPredicted RBP20.69■□□□□ 0.9
LINC00996-201ENST00000477392 CD163L1Q9NR16 1453 aa20.69■□□□□ 0.9
LINC00996-201ENST00000477392 ATAD2Q6PL18 1390 aa20.69■□□□□ 0.9
LINC00996-201ENST00000477392 TNNT2P45379 298 aaPredicted RBP20.68■□□□□ 0.9
LINC00996-201ENST00000477392 SLFN5Q08AF3 891 aa20.68■□□□□ 0.9
LINC00996-201ENST00000477392 TRMT2AQ8IZ69 625 aaKnown RBP20.68■□□□□ 0.9
LINC00996-201ENST00000477392 PLIN1O60240 522 aa20.67■□□□□ 0.9
LINC00996-201ENST00000477392 SRPK2P78362 688 aaKnown RBP20.67■□□□□ 0.9
LINC00996-201ENST00000477392 IQSEC2Q5JU85 1478 aa20.67■□□□□ 0.9
LINC00996-201ENST00000477392 POGKQ9P215 609 aa20.66■□□□□ 0.9
LINC00996-201ENST00000477392 ZMYM3Q14202 1370 aa20.66■□□□□ 0.9
LINC00996-201ENST00000477392 SPINK5Q9NQ38 1064 aaPredicted RBP20.65■□□□□ 0.9
LINC00996-201ENST00000477392 NGEFQ8N5V2 710 aa20.64■□□□□ 0.89
LINC00996-201ENST00000477392 NLRP1Q9C000 1473 aa20.64■□□□□ 0.89
LINC00996-201ENST00000477392 MTHFSP49914 203 aa20.63■□□□□ 0.89
LINC00996-201ENST00000477392 KIF20BQ96Q89 1820 aa20.62■□□□□ 0.89
LINC00996-201ENST00000477392 MED14O60244 1454 aa20.62■□□□□ 0.89
LINC00996-201ENST00000477392 NKTRP30414 1462 aaKnown RBP20.62■□□□□ 0.89
LINC00996-201ENST00000477392 DMRT2Q9Y5R5 561 aa20.61■□□□□ 0.89
LINC00996-201ENST00000477392 CRBNQ96SW2 442 aa20.61■□□□□ 0.89
LINC00996-201ENST00000477392 KNDC1Q76NI1 1749 aa20.61■□□□□ 0.89
LINC00996-201ENST00000477392 UBR1Q8IWV7 1749 aa20.6■□□□□ 0.89
LINC00996-201ENST00000477392 FANCIQ9NVI1 1328 aa20.6■□□□□ 0.89
LINC00996-201ENST00000477392 CDK19Q9BWU1 502 aa20.6■□□□□ 0.89
LINC00996-201ENST00000477392 E9PSI1 815 aa20.59■□□□□ 0.89
LINC00996-201ENST00000477392 C20orf194Q5TEA3 1177 aa20.59■□□□□ 0.89
LINC00996-201ENST00000477392 TNRQ92752 1358 aa20.59■□□□□ 0.89
LINC00996-201ENST00000477392 COL3A1P02461 1466 aaPredicted RBP20.58■□□□□ 0.89
LINC00996-201ENST00000477392 CFAP53Q96M91 514 aa20.58■□□□□ 0.89
LINC00996-201ENST00000477392 TERF2IPQ9NYB0 399 aa20.58■□□□□ 0.89
LINC00996-201ENST00000477392 RUNDC1Q96C34 613 aa20.58■□□□□ 0.88
LINC00996-201ENST00000477392 ESF1Q9H501 851 aaKnown RBP20.58■□□□□ 0.88
LINC00996-201ENST00000477392 ADGRB2O60241 1585 aa20.57■□□□□ 0.88
LINC00996-201ENST00000477392 WAPLQ7Z5K2 1190 aa20.56■□□□□ 0.88
LINC00996-201ENST00000477392 WWC1Q8IX03 1113 aa20.56■□□□□ 0.88
LINC00996-201ENST00000477392 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.56■□□□□ 0.88
LINC00996-201ENST00000477392 GGNBP2Q9H3C7 697 aa20.56■□□□□ 0.88
LINC00996-201ENST00000477392 METP08581 1390 aa20.56■□□□□ 0.88
LINC00996-201ENST00000477392 FYB1O15117 783 aa20.55■□□□□ 0.88
LINC00996-201ENST00000477392 ATP7BP35670 1465 aa20.55■□□□□ 0.88
LINC00996-201ENST00000477392 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
LINC00996-201ENST00000477392 CPS1P31327 1500 aa20.54■□□□□ 0.88
LINC00996-201ENST00000477392 TCP11L2Q8N4U5 519 aa20.53■□□□□ 0.88
LINC00996-201ENST00000477392 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
LINC00996-201ENST00000477392 CABP1Q9NZU7 370 aa20.53■□□□□ 0.88
LINC00996-201ENST00000477392 TECPR2O15040 1411 aa20.52■□□□□ 0.88
LINC00996-201ENST00000477392 RRP7AQ9Y3A4 280 aaKnown RBP20.51■□□□□ 0.87
LINC00996-201ENST00000477392 MSH5O43196 834 aa20.51■□□□□ 0.87
LINC00996-201ENST00000477392 TMEM2Q9UHN6 1383 aa20.5■□□□□ 0.87
LINC00996-201ENST00000477392 FAM135BQ49AJ0 1406 aa20.49■□□□□ 0.87
LINC00996-201ENST00000477392 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.49■□□□□ 0.87
LINC00996-201ENST00000477392 CCDC27Q2M243 656 aa20.48■□□□□ 0.87
LINC00996-201ENST00000477392 U2AF1L5P0DN76 240 aaPredicted RBP20.48■□□□□ 0.87
LINC00996-201ENST00000477392 U2AF1Q01081 240 aaKnown RBP eCLIP20.48■□□□□ 0.87
LINC00996-201ENST00000477392 NEUROD2Q15784 382 aa20.48■□□□□ 0.87
LINC00996-201ENST00000477392 NCBP3Q53F19 620 aaKnown RBP20.47■□□□□ 0.87
LINC00996-201ENST00000477392 BCAR3O75815 825 aa20.46■□□□□ 0.87
LINC00996-201ENST00000477392 MON2Q7Z3U7 1717 aa20.46■□□□□ 0.87
LINC00996-201ENST00000477392 CPSF1Q10570 1443 aaKnown RBP20.46■□□□□ 0.87
LINC00996-201ENST00000477392 ADAMTS13Q76LX8 1427 aa20.46■□□□□ 0.87
LINC00996-201ENST00000477392 WASLO00401 505 aaPredicted RBP20.46■□□□□ 0.87
LINC00996-201ENST00000477392 WDR63Q8IWG1 891 aa20.46■□□□□ 0.87
LINC00996-201ENST00000477392 CDC42BPGQ6DT37 1551 aa20.45■□□□□ 0.86
LINC00996-201ENST00000477392 PNPLA6Q8IY17 1366 aa20.45■□□□□ 0.86
LINC00996-201ENST00000477392 C3P01024 1663 aa20.45■□□□□ 0.86
LINC00996-201ENST00000477392 HDGFP51858 240 aaKnown RBP20.45■□□□□ 0.86
LINC00996-201ENST00000477392 TXNDC2Q86VQ3 553 aa20.45■□□□□ 0.86
LINC00996-201ENST00000477392 SIRT1Q96EB6 747 aa20.45■□□□□ 0.86
LINC00996-201ENST00000477392 PPIP5K1Q6PFW1 1433 aa20.44■□□□□ 0.86
LINC00996-201ENST00000477392 AKAP12Q02952 1782 aa20.44■□□□□ 0.86
LINC00996-201ENST00000477392 KDM2BQ8NHM5 1336 aa20.44■□□□□ 0.86
LINC00996-201ENST00000477392 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
LINC00996-201ENST00000477392 EDC4Q6P2E9 1401 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms