RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 TESK2Q96S53 571 aa16.22■□□□□ 0.19
TPRN-203ENST00000477345 APBB1O00213 710 aa16.21■□□□□ 0.19
TPRN-203ENST00000477345 VGLL3A8MV65 326 aa16.21■□□□□ 0.19
TPRN-203ENST00000477345 RLBP1P12271 317 aa16.21■□□□□ 0.19
TPRN-203ENST00000477345 CDC42BPBQ9Y5S2 1711 aa16.21■□□□□ 0.19
TPRN-203ENST00000477345 PARD3Q8TEW0 1356 aa16.21■□□□□ 0.18
TPRN-203ENST00000477345 RIPK4P57078 832 aa16.2■□□□□ 0.18
TPRN-203ENST00000477345 PPP4R3BQ5MIZ7 849 aa16.2■□□□□ 0.18
TPRN-203ENST00000477345 FOXD4L6Q3SYB3 417 aaPredicted RBP16.2■□□□□ 0.18
TPRN-203ENST00000477345 UTP14CQ5TAP6 766 aaKnown RBP16.2■□□□□ 0.18
TPRN-203ENST00000477345 FOXD4L3Q6VB84 417 aaPredicted RBP16.2■□□□□ 0.18
TPRN-203ENST00000477345 LNPKQ9C0E8 428 aa16.2■□□□□ 0.18
TPRN-203ENST00000477345 KANK1Q14678 1352 aa16.19■□□□□ 0.18
TPRN-203ENST00000477345 DMTNQ08495 405 aa16.19■□□□□ 0.18
TPRN-203ENST00000477345 TSR2Q969E8 191 aaKnown RBP16.19■□□□□ 0.18
TPRN-203ENST00000477345 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
TPRN-203ENST00000477345 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
TPRN-203ENST00000477345 A2MP01023 1474 aa16.18■□□□□ 0.18
TPRN-203ENST00000477345 PRAG1Q86YV5 1406 aa16.18■□□□□ 0.18
TPRN-203ENST00000477345 ADGBQ8N7X0 1667 aa16.18■□□□□ 0.18
TPRN-203ENST00000477345 FANCAO15360 1455 aa16.18■□□□□ 0.18
TPRN-203ENST00000477345 USP19O94966 1318 aa16.18■□□□□ 0.18
TPRN-203ENST00000477345 E9PSI1 815 aa16.18■□□□□ 0.18
TPRN-203ENST00000477345 CGNL1Q0VF96 1302 aa16.17■□□□□ 0.18
TPRN-203ENST00000477345 U2AF1L5P0DN76 240 aaPredicted RBP16.17■□□□□ 0.18
TPRN-203ENST00000477345 U2AF1Q01081 240 aaKnown RBP eCLIP16.17■□□□□ 0.18
TPRN-203ENST00000477345 SHANK2Q9UPX8 1470 aa16.17■□□□□ 0.18
TPRN-203ENST00000477345 MTERF4Q7Z6M4 381 aaKnown RBP16.17■□□□□ 0.18
TPRN-203ENST00000477345 MORC1Q86VD1 984 aa16.17■□□□□ 0.18
TPRN-203ENST00000477345 RWDD1Q9H446 243 aaPredicted RBP16.17■□□□□ 0.18
TPRN-203ENST00000477345 SMC4Q9NTJ3 1288 aa16.17■□□□□ 0.18
TPRN-203ENST00000477345 STAG3Q9UJ98 1225 aa16.17■□□□□ 0.18
TPRN-203ENST00000477345 ASXL2Q76L83 1435 aa16.16■□□□□ 0.18
TPRN-203ENST00000477345 TMEM51Q9NW97 253 aa16.16■□□□□ 0.18
TPRN-203ENST00000477345 CHMP5Q9NZZ3 219 aa16.16■□□□□ 0.18
TPRN-203ENST00000477345 ADCY10Q96PN6 1610 aa16.16■□□□□ 0.18
TPRN-203ENST00000477345 ELL2O00472 640 aaPredicted RBP16.16■□□□□ 0.18
TPRN-203ENST00000477345 CFAP65Q6ZU64 1925 aaKnown RBP16.16■□□□□ 0.18
TPRN-203ENST00000477345 RALGAPBQ86X10 1494 aa16.15■□□□□ 0.18
TPRN-203ENST00000477345 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
TPRN-203ENST00000477345 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.15■□□□□ 0.18
TPRN-203ENST00000477345 ZNF830Q96NB3 372 aaPredicted RBP16.15■□□□□ 0.18
TPRN-203ENST00000477345 ADGRL1O94910 1474 aa16.15■□□□□ 0.18
TPRN-203ENST00000477345 CDK11BP21127 795 aaKnown RBP16.14■□□□□ 0.17
TPRN-203ENST00000477345 MSNP26038 577 aaKnown RBP16.14■□□□□ 0.17
TPRN-203ENST00000477345 PMFBP1Q8TBY8 1022 aa16.14■□□□□ 0.17
TPRN-203ENST00000477345 R3HCC1Q9Y3T6 440 aaKnown RBP16.13■□□□□ 0.17
TPRN-203ENST00000477345 TCP11L2Q8N4U5 519 aa16.13■□□□□ 0.17
TPRN-203ENST00000477345 C1orf115Q9H7X2 142 aa16.13■□□□□ 0.17
TPRN-203ENST00000477345 ERBINQ96RT1 1412 aa16.13■□□□□ 0.17
TPRN-203ENST00000477345 OFD1O75665 1012 aa16.12■□□□□ 0.17
TPRN-203ENST00000477345 SLC12A5Q9H2X9 1139 aa16.12■□□□□ 0.17
TPRN-203ENST00000477345 DDX49Q9Y6V7 483 aaKnown RBP16.12■□□□□ 0.17
TPRN-203ENST00000477345 TBC1D32Q96NH3 1257 aa16.12■□□□□ 0.17
TPRN-203ENST00000477345 NOL8Q76FK4 1167 aaKnown RBP16.12■□□□□ 0.17
TPRN-203ENST00000477345 PREX2Q70Z35 1606 aa16.12■□□□□ 0.17
TPRN-203ENST00000477345 CROCC2H7BZ55 1655 aa16.12■□□□□ 0.17
TPRN-203ENST00000477345 UGGT1Q9NYU2 1555 aa16.11■□□□□ 0.17
TPRN-203ENST00000477345 WWC1Q8IX03 1113 aa16.11■□□□□ 0.17
TPRN-203ENST00000477345 TERF1P54274 439 aa16.11■□□□□ 0.17
TPRN-203ENST00000477345 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
TPRN-203ENST00000477345 ZCCHC11Q5TAX3 1644 aaKnown RBP16.11■□□□□ 0.17
TPRN-203ENST00000477345 FAM69CQ0P6D2 419 aa16.1■□□□□ 0.17
TPRN-203ENST00000477345 DNTTIP2Q5QJE6 756 aaKnown RBP16.1■□□□□ 0.17
TPRN-203ENST00000477345 UHRF1BP1Q6BDS2 1440 aa16.1■□□□□ 0.17
TPRN-203ENST00000477345 ZFP91Q96JP5 570 aaPredicted RBP16.1■□□□□ 0.17
TPRN-203ENST00000477345 PLCB2Q00722 1185 aa16.09■□□□□ 0.17
TPRN-203ENST00000477345 KDM5CP41229 1560 aa16.09■□□□□ 0.17
TPRN-203ENST00000477345 FBXO31Q5XUX0 539 aaPredicted RBP16.09■□□□□ 0.17
TPRN-203ENST00000477345 WDR7Q9Y4E6 1490 aa16.09■□□□□ 0.17
TPRN-203ENST00000477345 KIF20AO95235 890 aa16.09■□□□□ 0.17
TPRN-203ENST00000477345 GAS2L3Q86XJ1 694 aa16.09■□□□□ 0.17
TPRN-203ENST00000477345 ZSCAN20P17040 1043 aaPredicted RBP16.08■□□□□ 0.17
TPRN-203ENST00000477345 CD109Q6YHK3 1445 aa16.08■□□□□ 0.16
TPRN-203ENST00000477345 UQCRHLA0A096LP55 91 aa16.08■□□□□ 0.16
TPRN-203ENST00000477345 UQCRHP07919 91 aa16.08■□□□□ 0.16
TPRN-203ENST00000477345 RNF214Q8ND24 703 aa16.08■□□□□ 0.16
TPRN-203ENST00000477345 ARHGEF5Q12774 1597 aa16.08■□□□□ 0.16
TPRN-203ENST00000477345 ANKRD45Q5TZF3 282 aa16.07■□□□□ 0.16
TPRN-203ENST00000477345 TNPO1Q92973 898 aaKnown RBP16.07■□□□□ 0.16
TPRN-203ENST00000477345 ANTXR1Q9H6X2 564 aa16.07■□□□□ 0.16
TPRN-203ENST00000477345 PTMAP06454 111 aaKnown RBP16.07■□□□□ 0.16
TPRN-203ENST00000477345 RARSP54136 660 aaKnown RBP16.07■□□□□ 0.16
TPRN-203ENST00000477345 CABP2Q9NPB3 220 aa16.07■□□□□ 0.16
TPRN-203ENST00000477345 GBP4Q96PP9 640 aa16.06■□□□□ 0.16
TPRN-203ENST00000477345 DUOX2Q9NRD8 1548 aa16.06■□□□□ 0.16
TPRN-203ENST00000477345 GOLGA6L22H0YM25 854 aa16.06■□□□□ 0.16
TPRN-203ENST00000477345 ZSCAN30Q86W11 494 aa16.06■□□□□ 0.16
TPRN-203ENST00000477345 CDCA8Q53HL2 280 aa16.06■□□□□ 0.16
TPRN-203ENST00000477345 DDX11L8A8MPP1 907 aa16.05■□□□□ 0.16
TPRN-203ENST00000477345 NASPP49321 788 aaPredicted RBP16.05■□□□□ 0.16
TPRN-203ENST00000477345 MCTP1Q6DN14 999 aa16.05■□□□□ 0.16
TPRN-203ENST00000477345 XPCQ01831 940 aaPredicted RBP16.05■□□□□ 0.16
TPRN-203ENST00000477345 PDE3AQ14432 1141 aa16.05■□□□□ 0.16
TPRN-203ENST00000477345 CAVIN1Q6NZI2 390 aaKnown RBP16.05■□□□□ 0.16
TPRN-203ENST00000477345 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
TPRN-203ENST00000477345 DZIP1LQ8IYY4 767 aaKnown RBP16.05■□□□□ 0.16
TPRN-203ENST00000477345 CHAMP1Q96JM3 812 aa16.05■□□□□ 0.16
TPRN-203ENST00000477345 ISY1Q9ULR0 285 aaKnown RBP16.05■□□□□ 0.16
TPRN-203ENST00000477345 MYO5CQ9NQX4 1742 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms