RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 DAXXQ9UER7 740 aaPredicted RBP8.87□□□□□ -0.99
XRN1-211ENST00000477237 DDX11L8A8MPP1 907 aa8.86□□□□□ -0.99
XRN1-211ENST00000477237 TRIM32Q13049 653 aa8.86□□□□□ -0.99
XRN1-211ENST00000477237 MSS51Q4VC12 460 aa8.86□□□□□ -0.99
XRN1-211ENST00000477237 RNF19BQ6ZMZ0 732 aa8.86□□□□□ -0.99
XRN1-211ENST00000477237 FECHP22830 423 aa8.85□□□□□ -0.99
XRN1-211ENST00000477237 GCGRP47871 477 aa8.85□□□□□ -0.99
XRN1-211ENST00000477237 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
XRN1-211ENST00000477237 NLRP7Q8WX94 980 aa8.84□□□□□ -0.99
XRN1-211ENST00000477237 KIFC2Q96AC6 838 aa8.84□□□□□ -0.99
XRN1-211ENST00000477237 HIC1Q14526 733 aa8.83□□□□□ -1
XRN1-211ENST00000477237 GMPRP36959 345 aa8.81□□□□□ -1
XRN1-211ENST00000477237 FAM181BA6NEQ2 426 aa8.8□□□□□ -1
XRN1-211ENST00000477237 SEMA3EO15041 775 aa8.8□□□□□ -1
XRN1-211ENST00000477237 MMP16P51512 607 aa8.8□□□□□ -1
XRN1-211ENST00000477237 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
XRN1-211ENST00000477237 ZSCAN1Q8NBB4 408 aa8.79□□□□□ -1
XRN1-211ENST00000477237 NXF1Q9UBU9 619 aaKnown RBP8.79□□□□□ -1
XRN1-211ENST00000477237 REPIN1Q9BWE0 567 aaKnown RBP8.78□□□□□ -1
XRN1-211ENST00000477237 SKOR1P84550 965 aa8.77□□□□□ -1.01
XRN1-211ENST00000477237 RC3H1Q5TC82 1133 aaKnown RBP8.77□□□□□ -1.01
XRN1-211ENST00000477237 PHOX2BQ99453 314 aa8.77□□□□□ -1.01
XRN1-211ENST00000477237 TSHZ2Q9NRE2 1034 aa8.77□□□□□ -1.01
XRN1-211ENST00000477237 SULF1Q8IWU6 871 aa8.76□□□□□ -1.01
XRN1-211ENST00000477237 GNPATO15228 680 aa8.75□□□□□ -1.01
XRN1-211ENST00000477237 RBM26Q5T8P6 1007 aaKnown RBP8.75□□□□□ -1.01
XRN1-211ENST00000477237 DXOO77932 396 aaKnown RBP8.74□□□□□ -1.01
XRN1-211ENST00000477237 VEGFBP49765 207 aa8.74□□□□□ -1.01
XRN1-211ENST00000477237 Q3C1V9 767 aa8.74□□□□□ -1.01
XRN1-211ENST00000477237 GRIPAP1Q4V328 841 aa8.74□□□□□ -1.01
XRN1-211ENST00000477237 IRF7Q92985 503 aa8.74□□□□□ -1.01
XRN1-211ENST00000477237 GPR37O15354 613 aa8.73□□□□□ -1.01
XRN1-211ENST00000477237 ALDH1A1P00352 501 aa8.73□□□□□ -1.01
XRN1-211ENST00000477237 BMP1P13497 986 aa8.73□□□□□ -1.01
XRN1-211ENST00000477237 TRIM46Q7Z4K8 759 aa8.73□□□□□ -1.01
XRN1-211ENST00000477237 WNT7BP56706 349 aa8.72□□□□□ -1.01
XRN1-211ENST00000477237 CCDC24Q8N4L8 307 aa8.72□□□□□ -1.01
XRN1-211ENST00000477237 USB1Q9BQ65 265 aaKnown RBP8.72□□□□□ -1.01
XRN1-211ENST00000477237 ERBB4Q15303 1308 aa8.72□□□□□ -1.01
XRN1-211ENST00000477237 H3BM21 787 aa8.71□□□□□ -1.02
XRN1-211ENST00000477237 NPAS3Q8IXF0 933 aa8.71□□□□□ -1.02
XRN1-211ENST00000477237 SIAH2O43255 324 aa8.68□□□□□ -1.02
XRN1-211ENST00000477237 CAPN5O15484 640 aaPredicted RBP8.67□□□□□ -1.02
XRN1-211ENST00000477237 SUZ12Q15022 739 aaKnown RBP8.67□□□□□ -1.02
XRN1-211ENST00000477237 HLA-CQ95604 372 aa8.67□□□□□ -1.02
XRN1-211ENST00000477237 P3H3Q8IVL6 736 aa8.66□□□□□ -1.02
XRN1-211ENST00000477237 TESPA1A2RU30 521 aaPredicted RBP8.65□□□□□ -1.02
XRN1-211ENST00000477237 CD46P15529 392 aa8.65□□□□□ -1.02
XRN1-211ENST00000477237 KDM4AO75164 1064 aa8.64□□□□□ -1.03
XRN1-211ENST00000477237 PTCRAQ6ISU1 281 aaPredicted RBP8.63□□□□□ -1.03
XRN1-211ENST00000477237 EHBP1Q8NDI1 1231 aa8.63□□□□□ -1.03
XRN1-211ENST00000477237 ZFP42Q96MM3 310 aa8.63□□□□□ -1.03
XRN1-211ENST00000477237 WASF2Q9Y6W5 498 aa8.63□□□□□ -1.03
XRN1-211ENST00000477237 JUNDP17535 347 aa8.6□□□□□ -1.03
XRN1-211ENST00000477237 GUCA2AQ02747 115 aa8.59□□□□□ -1.03
XRN1-211ENST00000477237 SMYD5Q6GMV2 418 aa8.59□□□□□ -1.03
XRN1-211ENST00000477237 SYMPKQ92797 1274 aaKnown RBP8.59□□□□□ -1.03
XRN1-211ENST00000477237 HOXA2O43364 376 aa8.58□□□□□ -1.04
XRN1-211ENST00000477237 GSK3AP49840 483 aa8.57□□□□□ -1.04
XRN1-211ENST00000477237 USP46P62068 366 aa8.57□□□□□ -1.04
XRN1-211ENST00000477237 SH3BP2P78314 561 aa8.57□□□□□ -1.04
XRN1-211ENST00000477237 KCTD17Q8N5Z5 321 aa8.57□□□□□ -1.04
XRN1-211ENST00000477237 NUDT12Q9BQG2 462 aa8.57□□□□□ -1.04
XRN1-211ENST00000477237 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
XRN1-211ENST00000477237 VSIG8P0DPA2 414 aa8.56□□□□□ -1.04
XRN1-211ENST00000477237 KCNMA1Q12791 1236 aa8.55□□□□□ -1.04
XRN1-211ENST00000477237 MRPL14Q6P1L8 145 aaKnown RBP8.54□□□□□ -1.04
XRN1-211ENST00000477237 TLL2Q9Y6L7 1015 aa8.54□□□□□ -1.04
XRN1-211ENST00000477237 AMER1Q5JTC6 1135 aaPredicted RBP8.53□□□□□ -1.04
XRN1-211ENST00000477237 PURBQ96QR8 312 aaKnown RBP8.53□□□□□ -1.04
XRN1-211ENST00000477237 GPIHBP1Q8IV16 184 aa8.52□□□□□ -1.05
XRN1-211ENST00000477237 RTN4Q9NQC3 1192 aaKnown RBP8.52□□□□□ -1.05
XRN1-211ENST00000477237 MDM2Q00987 491 aaPredicted RBP8.51□□□□□ -1.05
XRN1-211ENST00000477237 NNTQ13423 1086 aa8.51□□□□□ -1.05
XRN1-211ENST00000477237 RETREG3Q86VR2 466 aa8.51□□□□□ -1.05
XRN1-211ENST00000477237 TIMP2P16035 220 aa8.5□□□□□ -1.05
XRN1-211ENST00000477237 SCARF1Q14162 830 aa8.5□□□□□ -1.05
XRN1-211ENST00000477237 LINC01559Q495D7 138 aa8.5□□□□□ -1.05
XRN1-211ENST00000477237 CCNYL3P0C7X3 344 aa8.49□□□□□ -1.05
XRN1-211ENST00000477237 BAP1Q92560 729 aa8.49□□□□□ -1.05
XRN1-211ENST00000477237 UNC93B1Q9H1C4 597 aa8.48□□□□□ -1.05
XRN1-211ENST00000477237 MS4A1P11836 297 aa8.47□□□□□ -1.05
XRN1-211ENST00000477237 WDR4P57081 412 aaKnown RBP8.47□□□□□ -1.05
XRN1-211ENST00000477237 KLF16Q9BXK1 252 aaPredicted RBP8.47□□□□□ -1.05
XRN1-211ENST00000477237 PCDHGC3Q9UN70 934 aa8.47□□□□□ -1.05
XRN1-211ENST00000477237 PLEKHG3A1L390 1219 aa8.46□□□□□ -1.06
XRN1-211ENST00000477237 MAP2K5Q13163 448 aa8.46□□□□□ -1.06
XRN1-211ENST00000477237 TMEM151AQ8N4L1 468 aa8.46□□□□□ -1.06
XRN1-211ENST00000477237 MPNDQ8N594 471 aa8.46□□□□□ -1.06
XRN1-211ENST00000477237 EVA1BQ9NVM1 165 aa8.46□□□□□ -1.06
XRN1-211ENST00000477237 IRF6O14896 467 aa8.45□□□□□ -1.06
XRN1-211ENST00000477237 ADH1CP00326 375 aa8.45□□□□□ -1.06
XRN1-211ENST00000477237 VARSP26640 1264 aaKnown RBP8.45□□□□□ -1.06
XRN1-211ENST00000477237 RASSF7Q02833 373 aa8.45□□□□□ -1.06
XRN1-211ENST00000477237 ZNF511Q8NB15 262 aa8.45□□□□□ -1.06
XRN1-211ENST00000477237 PPFIA3O75145 1194 aa8.44□□□□□ -1.06
XRN1-211ENST00000477237 GDF11O95390 407 aa8.44□□□□□ -1.06
XRN1-211ENST00000477237 PTPRNQ16849 979 aa8.44□□□□□ -1.06
XRN1-211ENST00000477237 C6orf229H3BNL8 230 aa8.43□□□□□ -1.06
XRN1-211ENST00000477237 MAN1A2O60476 641 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 274.7 ms