RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 KDM2AQ9Y2K7 1162 aa25.31■■□□□ 1.64
SREBF1-211ENST00000476994 NALCNQ8IZF0 1738 aa25.31■■□□□ 1.64
SREBF1-211ENST00000476994 ASXL1Q8IXJ9 1541 aa25.31■■□□□ 1.64
SREBF1-211ENST00000476994 NHSL1Q5SYE7 1610 aa25.3■■□□□ 1.64
SREBF1-211ENST00000476994 MST1RQ04912 1400 aa25.29■■□□□ 1.64
SREBF1-211ENST00000476994 ZNF772Q68DY9 489 aaPredicted RBP25.28■■□□□ 1.64
SREBF1-211ENST00000476994 RALGAPBQ86X10 1494 aa25.28■■□□□ 1.64
SREBF1-211ENST00000476994 PTCH1Q13635 1447 aa25.25■■□□□ 1.63
SREBF1-211ENST00000476994 LRP6O75581 1613 aa25.25■■□□□ 1.63
SREBF1-211ENST00000476994 LRRC59Q96AG4 307 aaKnown RBP25.24■■□□□ 1.63
SREBF1-211ENST00000476994 ADGRB1O14514 1584 aa25.23■■□□□ 1.63
SREBF1-211ENST00000476994 NUTM2BA6NNL0 878 aaPredicted RBP25.22■■□□□ 1.63
SREBF1-211ENST00000476994 NUTM2EB1AL46 878 aaPredicted RBP25.22■■□□□ 1.63
SREBF1-211ENST00000476994 NUTM2AQ8IVF1 878 aaPredicted RBP25.22■■□□□ 1.63
SREBF1-211ENST00000476994 C14orf93Q9H972 538 aaKnown RBP25.2■■□□□ 1.62
SREBF1-211ENST00000476994 GPRASP1Q5JY77 1395 aa25.19■■□□□ 1.62
SREBF1-211ENST00000476994 CFAP70Q5T0N1 1121 aa25.17■■□□□ 1.62
SREBF1-211ENST00000476994 ROBO2Q9HCK4 1378 aa25.17■■□□□ 1.62
SREBF1-211ENST00000476994 C1orf167Q5SNV9 1468 aa25.15■■□□□ 1.62
SREBF1-211ENST00000476994 NBPF1Q3BBV0 1214 aa25.14■■□□□ 1.62
SREBF1-211ENST00000476994 KNDC1Q76NI1 1749 aa25.14■■□□□ 1.61
SREBF1-211ENST00000476994 RXRBP28702 533 aa25.11■■□□□ 1.61
SREBF1-211ENST00000476994 ARHGEF28Q8N1W1 1705 aaKnown RBP25.11■■□□□ 1.61
SREBF1-211ENST00000476994 DDX17Q92841 729 aaKnown RBP25.1■■□□□ 1.61
SREBF1-211ENST00000476994 AFF2P51816 1311 aa25.1■■□□□ 1.61
SREBF1-211ENST00000476994 ROCK2O75116 1388 aaKnown RBP25.09■■□□□ 1.61
SREBF1-211ENST00000476994 PNPLA6Q8IY17 1366 aa25.09■■□□□ 1.61
SREBF1-211ENST00000476994 CDC42BPGQ6DT37 1551 aa25.07■■□□□ 1.6
SREBF1-211ENST00000476994 C8orf37Q96NL8 207 aa25.07■■□□□ 1.6
SREBF1-211ENST00000476994 ORAI2Q96SN7 254 aa25.06■■□□□ 1.6
SREBF1-211ENST00000476994 YTHDC2Q9H6S0 1430 aaKnown RBP25.05■■□□□ 1.6
SREBF1-211ENST00000476994 TMEM132EQ6IEE7 984 aa25.05■■□□□ 1.6
SREBF1-211ENST00000476994 STK26Q9P289 416 aa25.05■■□□□ 1.6
SREBF1-211ENST00000476994 CDK12Q9NYV4 1490 aaPredicted RBP25.04■■□□□ 1.6
SREBF1-211ENST00000476994 SOS2Q07890 1332 aaPredicted RBP25.04■■□□□ 1.6
SREBF1-211ENST00000476994 TECPR2O15040 1411 aa25.03■■□□□ 1.6
SREBF1-211ENST00000476994 DLC1Q96QB1 1528 aa25.03■■□□□ 1.6
SREBF1-211ENST00000476994 ESCO1Q5FWF5 840 aa25.03■■□□□ 1.6
SREBF1-211ENST00000476994 LRPPRCP42704 1394 aaKnown RBP25.03■■□□□ 1.6
SREBF1-211ENST00000476994 NGLY1Q96IV0 654 aa25.02■■□□□ 1.6
SREBF1-211ENST00000476994 NPHP3Q7Z494 1330 aa25.02■■□□□ 1.6
SREBF1-211ENST00000476994 ADAMTS2O95450 1211 aa25.01■■□□□ 1.59
SREBF1-211ENST00000476994 CARD11Q9BXL7 1154 aa25■■□□□ 1.59
SREBF1-211ENST00000476994 ABCC11Q96J66 1382 aa24.99■■□□□ 1.59
SREBF1-211ENST00000476994 QTRT2Q9H974 415 aaKnown RBP24.99■■□□□ 1.59
SREBF1-211ENST00000476994 RBM6P78332 1123 aaKnown RBP24.98■■□□□ 1.59
SREBF1-211ENST00000476994 USP47Q96K76 1375 aa24.97■■□□□ 1.59
SREBF1-211ENST00000476994 COL22A1Q8NFW1 1626 aaPredicted RBP24.97■■□□□ 1.59
SREBF1-211ENST00000476994 WAPLQ7Z5K2 1190 aa24.96■■□□□ 1.59
SREBF1-211ENST00000476994 QRICH2Q9H0J4 1663 aa24.96■■□□□ 1.59
SREBF1-211ENST00000476994 UPF1Q92900 1129 aaKnown RBP eCLIP24.94■■□□□ 1.58
SREBF1-211ENST00000476994 FMN2Q9NZ56 1722 aa24.94■■□□□ 1.58
SREBF1-211ENST00000476994 KIF1AQ12756 1690 aa24.93■■□□□ 1.58
SREBF1-211ENST00000476994 MARF1Q9Y4F3 1742 aaKnown RBP24.92■■□□□ 1.58
SREBF1-211ENST00000476994 FOXO3O43524 673 aa24.92■■□□□ 1.58
SREBF1-211ENST00000476994 NUTM2FA1L443 756 aa24.91■■□□□ 1.58
SREBF1-211ENST00000476994 USP21Q9UK80 565 aa24.91■■□□□ 1.58
SREBF1-211ENST00000476994 TRAK1Q9UPV9 953 aa24.91■■□□□ 1.58
SREBF1-211ENST00000476994 PXDNQ92626 1479 aa24.89■■□□□ 1.58
SREBF1-211ENST00000476994 SIRT1Q96EB6 747 aa24.89■■□□□ 1.58
SREBF1-211ENST00000476994 TRPC5Q9UL62 973 aaPredicted RBP24.89■■□□□ 1.58
SREBF1-211ENST00000476994 HSPA5P11021 654 aaKnown RBP24.88■■□□□ 1.57
SREBF1-211ENST00000476994 EIF3AQ14152 1382 aaKnown RBP24.88■■□□□ 1.57
SREBF1-211ENST00000476994 PLEKHH1Q9ULM0 1364 aa24.88■■□□□ 1.57
SREBF1-211ENST00000476994 EIF4G2P78344 907 aaKnown RBP eCLIP24.87■■□□□ 1.572e-7■■■■□ 25.1
SREBF1-211ENST00000476994 XPCQ01831 940 aaPredicted RBP24.87■■□□□ 1.57
SREBF1-211ENST00000476994 RGPD8O14715 1765 aaPredicted RBP24.87■■□□□ 1.57
SREBF1-211ENST00000476994 RGS12O14924 1447 aa24.86■■□□□ 1.57
SREBF1-211ENST00000476994 SBNO2Q9Y2G9 1366 aa24.85■■□□□ 1.57
SREBF1-211ENST00000476994 FNBP4Q8N3X1 1017 aaPredicted RBP24.85■■□□□ 1.57
SREBF1-211ENST00000476994 ADGRB2O60241 1585 aa24.84■■□□□ 1.57
SREBF1-211ENST00000476994 ST20-MTHFSA0A0A6YYL1 179 aa24.84■■□□□ 1.57
SREBF1-211ENST00000476994 TESK2Q96S53 571 aa24.83■■□□□ 1.57
SREBF1-211ENST00000476994 CENPJQ9HC77 1338 aaPredicted RBP24.83■■□□□ 1.56
SREBF1-211ENST00000476994 POGKQ9P215 609 aa24.82■■□□□ 1.56
SREBF1-211ENST00000476994 PSME1Q06323 249 aa24.81■■□□□ 1.56
SREBF1-211ENST00000476994 PRAM1Q96QH2 718 aa24.81■■□□□ 1.56
SREBF1-211ENST00000476994 TULP4Q9NRJ4 1543 aa24.8■■□□□ 1.56
SREBF1-211ENST00000476994 HAP1P54257 671 aaPredicted RBP24.79■■□□□ 1.56
SREBF1-211ENST00000476994 KRT28Q7Z3Y7 464 aa24.79■■□□□ 1.56
SREBF1-211ENST00000476994 PHF8Q9UPP1 1060 aa24.79■■□□□ 1.56
SREBF1-211ENST00000476994 ATAD2Q6PL18 1390 aa24.79■■□□□ 1.56
SREBF1-211ENST00000476994 SAFB2Q14151 953 aaKnown RBP eCLIP24.78■■□□□ 1.56
SREBF1-211ENST00000476994 HIRIP3Q9BW71 556 aaPredicted RBP24.78■■□□□ 1.56
SREBF1-211ENST00000476994 SPATA31A3Q5VYP0 1347 aa24.78■■□□□ 1.56
SREBF1-211ENST00000476994 ATRNO75882 1429 aa24.78■■□□□ 1.56
SREBF1-211ENST00000476994 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.76■■□□□ 1.55
SREBF1-211ENST00000476994 USP32Q8NFA0 1604 aa24.72■■□□□ 1.55
SREBF1-211ENST00000476994 BCL9LQ86UU0 1499 aa24.72■■□□□ 1.55
SREBF1-211ENST00000476994 TNS3Q68CZ2 1445 aa24.72■■□□□ 1.55
SREBF1-211ENST00000476994 ANKARQ7Z5J8 1434 aa24.71■■□□□ 1.55
SREBF1-211ENST00000476994 LMOD2Q6P5Q4 547 aa24.71■■□□□ 1.55
SREBF1-211ENST00000476994 MINK1Q8N4C8 1332 aaPredicted RBP24.7■■□□□ 1.54
SREBF1-211ENST00000476994 C11orf95C9JLR9 678 aaPredicted RBP24.7■■□□□ 1.54
SREBF1-211ENST00000476994 ARHGEF10O15013 1369 aa24.69■■□□□ 1.54
SREBF1-211ENST00000476994 GJD4Q96KN9 370 aaPredicted RBP24.69■■□□□ 1.54
SREBF1-211ENST00000476994 MYOM1P52179 1685 aa24.69■■□□□ 1.54
SREBF1-211ENST00000476994 SBNO1A3KN83 1393 aa24.68■■□□□ 1.54
SREBF1-211ENST00000476994 UNC5CLQ8IV45 518 aa24.68■■□□□ 1.54
SREBF1-211ENST00000476994 TOPAZ1Q8N9V7 1692 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms