RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 TRPM1Q7Z4N2 1603 aa23.99■■□□□ 1.43
RPN1-202ENST00000476931 SLAIN2Q9P270 581 aa23.98■■□□□ 1.43
RPN1-202ENST00000476931 EIF3AQ14152 1382 aaKnown RBP23.96■■□□□ 1.43
RPN1-202ENST00000476931 PLEKHH1Q9ULM0 1364 aa23.96■■□□□ 1.43
RPN1-202ENST00000476931 XIRP1Q702N8 1843 aaKnown RBP23.95■■□□□ 1.42
RPN1-202ENST00000476931 CENPJQ9HC77 1338 aaPredicted RBP23.94■■□□□ 1.42
RPN1-202ENST00000476931 SLC24A1O60721 1099 aa23.94■■□□□ 1.42
RPN1-202ENST00000476931 SAFB2Q14151 953 aaKnown RBP eCLIP23.93■■□□□ 1.42
RPN1-202ENST00000476931 PIP4K2BP78356 416 aa23.89■■□□□ 1.41
RPN1-202ENST00000476931 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.89■■□□□ 1.41
RPN1-202ENST00000476931 MINK1Q8N4C8 1332 aaPredicted RBP23.87■■□□□ 1.41
RPN1-202ENST00000476931 WASLO00401 505 aaPredicted RBP23.87■■□□□ 1.41
RPN1-202ENST00000476931 SCAF1Q9H7N4 1312 aaKnown RBP23.86■■□□□ 1.41
RPN1-202ENST00000476931 CDC42BPGQ6DT37 1551 aa23.84■■□□□ 1.41
RPN1-202ENST00000476931 HIRIP3Q9BW71 556 aaPredicted RBP23.84■■□□□ 1.41
RPN1-202ENST00000476931 MST1RQ04912 1400 aa23.84■■□□□ 1.41
RPN1-202ENST00000476931 NALCNQ8IZF0 1738 aa23.83■■□□□ 1.41
RPN1-202ENST00000476931 ARHGEF28Q8N1W1 1705 aaKnown RBP23.83■■□□□ 1.41
RPN1-202ENST00000476931 SBNO2Q9Y2G9 1366 aa23.82■■□□□ 1.4
RPN1-202ENST00000476931 EVC2Q86UK5 1308 aa23.82■■□□□ 1.4
RPN1-202ENST00000476931 CDK19Q9BWU1 502 aa23.81■■□□□ 1.4
RPN1-202ENST00000476931 C1orf167Q5SNV9 1468 aa23.81■■□□□ 1.4
RPN1-202ENST00000476931 ST20-MTHFSA0A0A6YYL1 179 aa23.8■■□□□ 1.4
RPN1-202ENST00000476931 ADGRB2O60241 1585 aa23.79■■□□□ 1.4
RPN1-202ENST00000476931 ZEB1P37275 1124 aaPredicted RBP23.79■■□□□ 1.4
RPN1-202ENST00000476931 ESCO1Q5FWF5 840 aa23.79■■□□□ 1.4
RPN1-202ENST00000476931 BRINP3Q76B58 766 aa23.79■■□□□ 1.4
RPN1-202ENST00000476931 USP47Q96K76 1375 aa23.78■■□□□ 1.4
RPN1-202ENST00000476931 ANKARQ7Z5J8 1434 aa23.78■■□□□ 1.4
RPN1-202ENST00000476931 EIF4G2P78344 907 aaKnown RBP eCLIP23.78■■□□□ 1.4
RPN1-202ENST00000476931 ILDR1Q86SU0 546 aaPredicted RBP23.78■■□□□ 1.4
RPN1-202ENST00000476931 PUS7Q96PZ0 661 aaKnown RBP23.77■■□□□ 1.4
RPN1-202ENST00000476931 NUTM2FA1L443 756 aa23.76■■□□□ 1.39
RPN1-202ENST00000476931 ORAI2Q96SN7 254 aa23.76■■□□□ 1.39
RPN1-202ENST00000476931 SRPK2P78362 688 aaKnown RBP23.75■■□□□ 1.39
RPN1-202ENST00000476931 NUDT16Q96DE0 195 aaKnown RBP23.75■■□□□ 1.39
RPN1-202ENST00000476931 CCDC61Q9Y6R9 512 aa23.75■■□□□ 1.39
RPN1-202ENST00000476931 TESK2Q96S53 571 aa23.73■■□□□ 1.39
RPN1-202ENST00000476931 PHF8Q9UPP1 1060 aa23.73■■□□□ 1.39
RPN1-202ENST00000476931 TMF1P82094 1093 aa23.71■■□□□ 1.39
RPN1-202ENST00000476931 CDCA8Q53HL2 280 aa23.71■■□□□ 1.39
RPN1-202ENST00000476931 FMN2Q9NZ56 1722 aa23.7■■□□□ 1.39
RPN1-202ENST00000476931 TULP4Q9NRJ4 1543 aa23.7■■□□□ 1.38
RPN1-202ENST00000476931 NPHP3Q7Z494 1330 aa23.7■■□□□ 1.38
RPN1-202ENST00000476931 CABP2Q9NPB3 220 aa23.7■■□□□ 1.38
RPN1-202ENST00000476931 QRICH2Q9H0J4 1663 aa23.7■■□□□ 1.38
RPN1-202ENST00000476931 HSPA1LP34931 641 aa23.69■■□□□ 1.38
RPN1-202ENST00000476931 PRR36Q9H6K5 1346 aa23.68■■□□□ 1.38
RPN1-202ENST00000476931 ROBO1Q9Y6N7 1651 aa23.68■■□□□ 1.38
RPN1-202ENST00000476931 PLEKHG3A1L390 1219 aa23.68■■□□□ 1.38
RPN1-202ENST00000476931 FOXO3O43524 673 aa23.67■■□□□ 1.38
RPN1-202ENST00000476931 ATAD2Q6PL18 1390 aa23.66■■□□□ 1.38
RPN1-202ENST00000476931 HSPA5P11021 654 aaKnown RBP23.66■■□□□ 1.38
RPN1-202ENST00000476931 PSME1Q06323 249 aa23.66■■□□□ 1.38
RPN1-202ENST00000476931 LRRC59Q96AG4 307 aaKnown RBP23.66■■□□□ 1.38
RPN1-202ENST00000476931 NGDNQ8NEJ9 315 aaKnown RBP23.64■■□□□ 1.37
RPN1-202ENST00000476931 SOS2Q07890 1332 aaPredicted RBP23.63■■□□□ 1.37
RPN1-202ENST00000476931 PMFBP1Q8TBY8 1022 aa23.63■■□□□ 1.37
RPN1-202ENST00000476931 ATP7BP35670 1465 aa23.62■■□□□ 1.37
RPN1-202ENST00000476931 CABP1Q9NZU7 370 aa23.62■■□□□ 1.37
RPN1-202ENST00000476931 AHDC1Q5TGY3 1603 aaPredicted RBP23.62■■□□□ 1.37
RPN1-202ENST00000476931 KRT28Q7Z3Y7 464 aa23.61■■□□□ 1.37
RPN1-202ENST00000476931 ZNF692Q9BU19 519 aaPredicted RBP23.6■■□□□ 1.37
RPN1-202ENST00000476931 USP32Q8NFA0 1604 aa23.59■■□□□ 1.37
RPN1-202ENST00000476931 KIF1AQ12756 1690 aa23.58■■□□□ 1.37
RPN1-202ENST00000476931 POLR3AO14802 1390 aaPredicted RBP23.58■■□□□ 1.37
RPN1-202ENST00000476931 DDX17Q92841 729 aaKnown RBP23.58■■□□□ 1.37
RPN1-202ENST00000476931 PPIP5K1Q6PFW1 1433 aa23.58■■□□□ 1.36
RPN1-202ENST00000476931 ACEP12821 1306 aa23.58■■□□□ 1.36
RPN1-202ENST00000476931 NINLQ9Y2I6 1382 aa23.57■■□□□ 1.36
RPN1-202ENST00000476931 BRD4O60885 1362 aaPredicted RBP23.55■■□□□ 1.36
RPN1-202ENST00000476931 JCADQ9P266 1359 aa23.55■■□□□ 1.36
RPN1-202ENST00000476931 TMC1Q8TDI8 760 aa23.54■■□□□ 1.36
RPN1-202ENST00000476931 NHSL1Q5SYE7 1610 aa23.54■■□□□ 1.36
RPN1-202ENST00000476931 SBNO1A3KN83 1393 aa23.53■■□□□ 1.36
RPN1-202ENST00000476931 DISP3Q9P2K9 1392 aa23.53■■□□□ 1.36
RPN1-202ENST00000476931 PHLPP1O60346 1717 aa23.53■■□□□ 1.36
RPN1-202ENST00000476931 ITSN1Q15811 1721 aa23.53■■□□□ 1.36
RPN1-202ENST00000476931 RGPD8O14715 1765 aaPredicted RBP23.53■■□□□ 1.36
RPN1-202ENST00000476931 TERF2IPQ9NYB0 399 aa23.53■■□□□ 1.36
RPN1-202ENST00000476931 PXDNQ92626 1479 aa23.51■■□□□ 1.35
RPN1-202ENST00000476931 XPCQ01831 940 aaPredicted RBP23.51■■□□□ 1.35
RPN1-202ENST00000476931 HDGFL2Q7Z4V5 671 aaPredicted RBP23.51■■□□□ 1.35
RPN1-202ENST00000476931 SPATA31A3Q5VYP0 1347 aa23.51■■□□□ 1.35
RPN1-202ENST00000476931 SLC12A5Q9H2X9 1139 aa23.5■■□□□ 1.35
RPN1-202ENST00000476931 COL16A1Q07092 1604 aaPredicted RBP23.49■■□□□ 1.35
RPN1-202ENST00000476931 SPATA31A6Q5VVP1 1343 aa23.49■■□□□ 1.35
RPN1-202ENST00000476931 TOPAZ1Q8N9V7 1692 aa23.48■■□□□ 1.35
RPN1-202ENST00000476931 ARHGEF10O15013 1369 aa23.47■■□□□ 1.35
RPN1-202ENST00000476931 PAK3O75914 559 aaPredicted RBP23.46■■□□□ 1.35
RPN1-202ENST00000476931 CPSF1Q10570 1443 aaKnown RBP23.46■■□□□ 1.35
RPN1-202ENST00000476931 PNPLA6Q8IY17 1366 aa23.44■■□□□ 1.34
RPN1-202ENST00000476931 TNS3Q68CZ2 1445 aa23.43■■□□□ 1.34
RPN1-202ENST00000476931 KTN1Q86UP2 1357 aaKnown RBP23.43■■□□□ 1.34
RPN1-202ENST00000476931 LMOD2Q6P5Q4 547 aa23.43■■□□□ 1.34
RPN1-202ENST00000476931 USP6P35125 1406 aa23.42■■□□□ 1.34
RPN1-202ENST00000476931 TTC21AQ8NDW8 1320 aa23.42■■□□□ 1.34
RPN1-202ENST00000476931 C11orf95C9JLR9 678 aaPredicted RBP23.41■■□□□ 1.34
RPN1-202ENST00000476931 ABTB2Q8N961 1025 aa23.41■■□□□ 1.34
RPN1-202ENST00000476931 POLR3GLQ9BT43 218 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms