RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 KIAA1210Q9ULL0 1709 aa25.47■■□□□ 1.67
SMIM4-202ENST00000476842 KNDC1Q76NI1 1749 aa25.46■■□□□ 1.67
SMIM4-202ENST00000476842 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.46■■□□□ 1.67
SMIM4-202ENST00000476842 SAFB2Q14151 953 aaKnown RBP eCLIP25.42■■□□□ 1.66
SMIM4-202ENST00000476842 MST1RQ04912 1400 aa25.4■■□□□ 1.66
SMIM4-202ENST00000476842 ROCK2O75116 1388 aaKnown RBP25.4■■□□□ 1.66
SMIM4-202ENST00000476842 HSPA1LP34931 641 aa25.39■■□□□ 1.66
SMIM4-202ENST00000476842 NALCNQ8IZF0 1738 aa25.39■■□□□ 1.65
SMIM4-202ENST00000476842 GPRASP1Q5JY77 1395 aa25.37■■□□□ 1.65
SMIM4-202ENST00000476842 TRPM1Q7Z4N2 1603 aa25.36■■□□□ 1.65
SMIM4-202ENST00000476842 BRINP3Q76B58 766 aa25.35■■□□□ 1.65
SMIM4-202ENST00000476842 C1orf167Q5SNV9 1468 aa25.34■■□□□ 1.65
SMIM4-202ENST00000476842 CARD11Q9BXL7 1154 aa25.34■■□□□ 1.65
SMIM4-202ENST00000476842 MINK1Q8N4C8 1332 aaPredicted RBP25.34■■□□□ 1.65
SMIM4-202ENST00000476842 CDC42BPGQ6DT37 1551 aa25.33■■□□□ 1.65
SMIM4-202ENST00000476842 HIRIP3Q9BW71 556 aaPredicted RBP25.32■■□□□ 1.64
SMIM4-202ENST00000476842 RALGAPBQ86X10 1494 aa25.32■■□□□ 1.64
SMIM4-202ENST00000476842 ORAI2Q96SN7 254 aa25.31■■□□□ 1.64
SMIM4-202ENST00000476842 CENPJQ9HC77 1338 aaPredicted RBP25.31■■□□□ 1.64
SMIM4-202ENST00000476842 ROBO1Q9Y6N7 1651 aa25.3■■□□□ 1.64
SMIM4-202ENST00000476842 WASLO00401 505 aaPredicted RBP25.3■■□□□ 1.64
SMIM4-202ENST00000476842 NUTM2FA1L443 756 aa25.29■■□□□ 1.64
SMIM4-202ENST00000476842 ESCO1Q5FWF5 840 aa25.28■■□□□ 1.64
SMIM4-202ENST00000476842 ARHGEF28Q8N1W1 1705 aaKnown RBP25.28■■□□□ 1.64
SMIM4-202ENST00000476842 EIF3AQ14152 1382 aaKnown RBP25.25■■□□□ 1.63
SMIM4-202ENST00000476842 ADGRB2O60241 1585 aa25.24■■□□□ 1.63
SMIM4-202ENST00000476842 CDK19Q9BWU1 502 aa25.24■■□□□ 1.63
SMIM4-202ENST00000476842 ANKARQ7Z5J8 1434 aa25.2■■□□□ 1.63
SMIM4-202ENST00000476842 FMN2Q9NZ56 1722 aa25.2■■□□□ 1.63
SMIM4-202ENST00000476842 DDX17Q92841 729 aaKnown RBP25.2■■□□□ 1.62
SMIM4-202ENST00000476842 AHDC1Q5TGY3 1603 aaPredicted RBP25.19■■□□□ 1.62
SMIM4-202ENST00000476842 PRR36Q9H6K5 1346 aa25.18■■□□□ 1.62
SMIM4-202ENST00000476842 NUDT16Q96DE0 195 aaKnown RBP25.18■■□□□ 1.62
SMIM4-202ENST00000476842 PHF8Q9UPP1 1060 aa25.18■■□□□ 1.62
SMIM4-202ENST00000476842 FOXO3O43524 673 aa25.17■■□□□ 1.62
SMIM4-202ENST00000476842 NPHP3Q7Z494 1330 aa25.16■■□□□ 1.62
SMIM4-202ENST00000476842 SOS2Q07890 1332 aaPredicted RBP25.15■■□□□ 1.62
SMIM4-202ENST00000476842 LRRC59Q96AG4 307 aaKnown RBP25.15■■□□□ 1.62
SMIM4-202ENST00000476842 TULP4Q9NRJ4 1543 aa25.15■■□□□ 1.62
SMIM4-202ENST00000476842 EVC2Q86UK5 1308 aa25.14■■□□□ 1.62
SMIM4-202ENST00000476842 SRPK2P78362 688 aaKnown RBP25.14■■□□□ 1.62
SMIM4-202ENST00000476842 SBNO2Q9Y2G9 1366 aa25.14■■□□□ 1.61
SMIM4-202ENST00000476842 ST20-MTHFSA0A0A6YYL1 179 aa25.13■■□□□ 1.61
SMIM4-202ENST00000476842 CCDC61Q9Y6R9 512 aa25.13■■□□□ 1.61
SMIM4-202ENST00000476842 PHLPP1O60346 1717 aa25.12■■□□□ 1.61
SMIM4-202ENST00000476842 PMFBP1Q8TBY8 1022 aa25.12■■□□□ 1.61
SMIM4-202ENST00000476842 CABP2Q9NPB3 220 aa25.12■■□□□ 1.61
SMIM4-202ENST00000476842 JCADQ9P266 1359 aa25.11■■□□□ 1.61
SMIM4-202ENST00000476842 COL16A1Q07092 1604 aaPredicted RBP25.11■■□□□ 1.61
SMIM4-202ENST00000476842 SLC24A1O60721 1099 aa25.1■■□□□ 1.61
SMIM4-202ENST00000476842 NHSL1Q5SYE7 1610 aa25.1■■□□□ 1.61
SMIM4-202ENST00000476842 USP32Q8NFA0 1604 aa25.1■■□□□ 1.61
SMIM4-202ENST00000476842 QRICH2Q9H0J4 1663 aa25.1■■□□□ 1.61
SMIM4-202ENST00000476842 KRT28Q7Z3Y7 464 aa25.09■■□□□ 1.61
SMIM4-202ENST00000476842 ATP7BP35670 1465 aa25.09■■□□□ 1.61
SMIM4-202ENST00000476842 USP47Q96K76 1375 aa25.08■■□□□ 1.61
SMIM4-202ENST00000476842 PLEKHG3A1L390 1219 aa25.08■■□□□ 1.61
SMIM4-202ENST00000476842 PSME1Q06323 249 aa25.08■■□□□ 1.61
SMIM4-202ENST00000476842 TESK2Q96S53 571 aa25.08■■□□□ 1.61
SMIM4-202ENST00000476842 XPCQ01831 940 aaPredicted RBP25.07■■□□□ 1.6
SMIM4-202ENST00000476842 NGDNQ8NEJ9 315 aaKnown RBP25.06■■□□□ 1.6
SMIM4-202ENST00000476842 PXDNQ92626 1479 aa25.05■■□□□ 1.6
SMIM4-202ENST00000476842 KIF1AQ12756 1690 aa25.04■■□□□ 1.6
SMIM4-202ENST00000476842 PUS7Q96PZ0 661 aaKnown RBP25.03■■□□□ 1.6
SMIM4-202ENST00000476842 RGPD8O14715 1765 aaPredicted RBP25.03■■□□□ 1.6
SMIM4-202ENST00000476842 CABP1Q9NZU7 370 aa25.02■■□□□ 1.6
SMIM4-202ENST00000476842 SPATA31A6Q5VVP1 1343 aa25.02■■□□□ 1.6
SMIM4-202ENST00000476842 ACEP12821 1306 aa25.01■■□□□ 1.59
SMIM4-202ENST00000476842 SPATA31A3Q5VYP0 1347 aa25.01■■□□□ 1.59
SMIM4-202ENST00000476842 POLR3AO14802 1390 aaPredicted RBP25■■□□□ 1.59
SMIM4-202ENST00000476842 PNPLA6Q8IY17 1366 aa25■■□□□ 1.59
SMIM4-202ENST00000476842 SBNO1A3KN83 1393 aa24.99■■□□□ 1.59
SMIM4-202ENST00000476842 EIF4G2P78344 907 aaKnown RBP eCLIP24.99■■□□□ 1.59
SMIM4-202ENST00000476842 PPIP5K1Q6PFW1 1433 aa24.99■■□□□ 1.59
SMIM4-202ENST00000476842 ATAD2Q6PL18 1390 aa24.99■■□□□ 1.59
SMIM4-202ENST00000476842 TMF1P82094 1093 aa24.97■■□□□ 1.59
SMIM4-202ENST00000476842 HSPA5P11021 654 aaKnown RBP24.94■■□□□ 1.58
SMIM4-202ENST00000476842 ITSN1Q15811 1721 aa24.93■■□□□ 1.58
SMIM4-202ENST00000476842 ZNF692Q9BU19 519 aaPredicted RBP24.93■■□□□ 1.58
SMIM4-202ENST00000476842 SHPRHQ149N8 1683 aa24.93■■□□□ 1.58
SMIM4-202ENST00000476842 TOPAZ1Q8N9V7 1692 aa24.93■■□□□ 1.58
SMIM4-202ENST00000476842 NUTM2BA6NNL0 878 aaPredicted RBP24.92■■□□□ 1.58
SMIM4-202ENST00000476842 NUTM2EB1AL46 878 aaPredicted RBP24.92■■□□□ 1.58
SMIM4-202ENST00000476842 NUTM2AQ8IVF1 878 aaPredicted RBP24.92■■□□□ 1.58
SMIM4-202ENST00000476842 TNS3Q68CZ2 1445 aa24.92■■□□□ 1.58
SMIM4-202ENST00000476842 PAK3O75914 559 aaPredicted RBP24.91■■□□□ 1.58
SMIM4-202ENST00000476842 CDCA8Q53HL2 280 aa24.91■■□□□ 1.58
SMIM4-202ENST00000476842 DISP3Q9P2K9 1392 aa24.91■■□□□ 1.58
SMIM4-202ENST00000476842 LMOD2Q6P5Q4 547 aa24.9■■□□□ 1.58
SMIM4-202ENST00000476842 ARHGEF10O15013 1369 aa24.9■■□□□ 1.58
SMIM4-202ENST00000476842 MED1Q15648 1581 aaPredicted RBP24.89■■□□□ 1.58
SMIM4-202ENST00000476842 TMC1Q8TDI8 760 aa24.89■■□□□ 1.58
SMIM4-202ENST00000476842 SLC12A5Q9H2X9 1139 aa24.89■■□□□ 1.58
SMIM4-202ENST00000476842 BRD4O60885 1362 aaPredicted RBP24.89■■□□□ 1.57
SMIM4-202ENST00000476842 LRP6O75581 1613 aa24.86■■□□□ 1.57
SMIM4-202ENST00000476842 CPSF1Q10570 1443 aaKnown RBP24.86■■□□□ 1.57
SMIM4-202ENST00000476842 MEX3CQ5U5Q3 659 aaKnown RBP24.85■■□□□ 1.57
SMIM4-202ENST00000476842 NINLQ9Y2I6 1382 aa24.84■■□□□ 1.57
SMIM4-202ENST00000476842 USP6P35125 1406 aa24.84■■□□□ 1.57
SMIM4-202ENST00000476842 COL22A1Q8NFW1 1626 aaPredicted RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms