RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 RNF19BQ6ZMZ0 732 aa13.56□□□□□ -0.24
NUP58-209ENST00000476553 PHOX2BQ99453 314 aa13.55□□□□□ -0.24
NUP58-209ENST00000476553 TTC24A2A3L6 582 aaPredicted RBP13.54□□□□□ -0.24
NUP58-209ENST00000476553 SMPD1P17405 629 aa13.54□□□□□ -0.24
NUP58-209ENST00000476553 ZBTB24O43167 697 aaPredicted RBP13.52□□□□□ -0.25
NUP58-209ENST00000476553 TRIM32Q13049 653 aa13.52□□□□□ -0.25
NUP58-209ENST00000476553 SNIP1Q8TAD8 396 aaKnown RBP13.51□□□□□ -0.25
NUP58-209ENST00000476553 STK17AQ9UEE5 414 aa13.51□□□□□ -0.25
NUP58-209ENST00000476553 MMP16P51512 607 aa13.5□□□□□ -0.25
NUP58-209ENST00000476553 LCE2CQ5TA81 110 aa13.5□□□□□ -0.25
NUP58-209ENST00000476553 ATP13A2Q9NQ11 1180 aa13.5□□□□□ -0.25
NUP58-209ENST00000476553 SMYD5Q6GMV2 418 aa13.48□□□□□ -0.25
NUP58-209ENST00000476553 TRIM47Q96LD4 638 aa13.47□□□□□ -0.25
NUP58-209ENST00000476553 GRIPAP1Q4V328 841 aa13.46□□□□□ -0.25
NUP58-209ENST00000476553 MRGPRX2Q96LB1 330 aa13.46□□□□□ -0.25
NUP58-209ENST00000476553 SNRPBP14678 240 aaKnown RBP13.45□□□□□ -0.26
NUP58-209ENST00000476553 INSM1Q01101 510 aaPredicted RBP13.45□□□□□ -0.26
NUP58-209ENST00000476553 Q3C1V9 767 aa13.45□□□□□ -0.26
NUP58-209ENST00000476553 J3QL48 77 aa13.44□□□□□ -0.26
NUP58-209ENST00000476553 DXOO77932 396 aaKnown RBP13.43□□□□□ -0.26
NUP58-209ENST00000476553 REPIN1Q9BWE0 567 aaKnown RBP13.42□□□□□ -0.26
NUP58-209ENST00000476553 SENP2Q9HC62 589 aa13.42□□□□□ -0.26
NUP58-209ENST00000476553 TERTO14746 1132 aaKnown RBP13.41□□□□□ -0.26
NUP58-209ENST00000476553 CD46P15529 392 aa13.4□□□□□ -0.26
NUP58-209ENST00000476553 HPS1Q92902 700 aa13.39□□□□□ -0.27
NUP58-209ENST00000476553 USB1Q9BQ65 265 aaKnown RBP13.38□□□□□ -0.27
NUP58-209ENST00000476553 KIFC2Q96AC6 838 aa13.36□□□□□ -0.27
NUP58-209ENST00000476553 SKOR1P84550 965 aa13.35□□□□□ -0.27
NUP58-209ENST00000476553 WNT7BP56706 349 aa13.34□□□□□ -0.27
NUP58-209ENST00000476553 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
NUP58-209ENST00000476553 KDM4AO75164 1064 aa13.33□□□□□ -0.28
NUP58-209ENST00000476553 RC3H1Q5TC82 1133 aaKnown RBP13.32□□□□□ -0.28
NUP58-209ENST00000476553 HLA-CQ95604 372 aa13.3□□□□□ -0.28
NUP58-209ENST00000476553 USP46P62068 366 aa13.29□□□□□ -0.28
NUP58-209ENST00000476553 HOXA2O43364 376 aa13.27□□□□□ -0.29
NUP58-209ENST00000476553 CCDC24Q8N4L8 307 aa13.27□□□□□ -0.29
NUP58-209ENST00000476553 MAP2K5Q13163 448 aa13.26□□□□□ -0.29
NUP58-209ENST00000476553 JUNDP17535 347 aa13.24□□□□□ -0.29
NUP58-209ENST00000476553 ALDH1A1P00352 501 aa13.22□□□□□ -0.29
NUP58-209ENST00000476553 SIAH2O43255 324 aa13.21□□□□□ -0.29
NUP58-209ENST00000476553 NXF1Q9UBU9 619 aaKnown RBP13.21□□□□□ -0.29
NUP58-209ENST00000476553 TRIM46Q7Z4K8 759 aa13.2□□□□□ -0.3
NUP58-209ENST00000476553 LORP23490 312 aaPredicted RBP13.19□□□□□ -0.3
NUP58-209ENST00000476553 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
NUP58-209ENST00000476553 GUCA2AQ02747 115 aa13.19□□□□□ -0.3
NUP58-209ENST00000476553 SLC16A10Q8TF71 515 aa13.19□□□□□ -0.3
NUP58-209ENST00000476553 BMP1P13497 986 aa13.18□□□□□ -0.3
NUP58-209ENST00000476553 NPAS3Q8IXF0 933 aa13.18□□□□□ -0.3
NUP58-209ENST00000476553 IRF6O14896 467 aa13.17□□□□□ -0.3
NUP58-209ENST00000476553 GMPRP36959 345 aa13.16□□□□□ -0.3
NUP58-209ENST00000476553 RETREG3Q86VR2 466 aa13.16□□□□□ -0.3
NUP58-209ENST00000476553 NUDT12Q9BQG2 462 aa13.16□□□□□ -0.3
NUP58-209ENST00000476553 PTCRAQ6ISU1 281 aaPredicted RBP13.15□□□□□ -0.3
NUP58-209ENST00000476553 EHBP1Q8NDI1 1231 aa13.15□□□□□ -0.3
NUP58-209ENST00000476553 SYMPKQ92797 1274 aaKnown RBP13.15□□□□□ -0.3
NUP58-209ENST00000476553 FAM181BA6NEQ2 426 aa13.14□□□□□ -0.31
NUP58-209ENST00000476553 CAPN5O15484 640 aaPredicted RBP13.13□□□□□ -0.31
NUP58-209ENST00000476553 IRF7Q92985 503 aa13.13□□□□□ -0.31
NUP58-209ENST00000476553 H3BM21 787 aa13.12□□□□□ -0.31
NUP58-209ENST00000476553 FAM217BQ9NTX9 383 aaPredicted RBP13.12□□□□□ -0.31
NUP58-209ENST00000476553 ZSCAN1Q8NBB4 408 aa13.11□□□□□ -0.31
NUP58-209ENST00000476553 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
NUP58-209ENST00000476553 WASF2Q9Y6W5 498 aa13.1□□□□□ -0.31
NUP58-209ENST00000476553 SH3BP2P78314 561 aa13.09□□□□□ -0.31
NUP58-209ENST00000476553 CCDC102AQ96A19 550 aa13.09□□□□□ -0.31
NUP58-209ENST00000476553 GPCPD1Q9NPB8 672 aa13.09□□□□□ -0.31
NUP58-209ENST00000476553 PLCB2Q00722 1185 aa13.08□□□□□ -0.32
NUP58-209ENST00000476553 CCNYL3P0C7X3 344 aa13.07□□□□□ -0.32
NUP58-209ENST00000476553 ERBB4Q15303 1308 aa13.07□□□□□ -0.32
NUP58-209ENST00000476553 CLCN1P35523 988 aa13.06□□□□□ -0.32
NUP58-209ENST00000476553 VEGFBP49765 207 aa13.06□□□□□ -0.32
NUP58-209ENST00000476553 PCDHGC3Q9UN70 934 aa13.06□□□□□ -0.32
NUP58-209ENST00000476553 MS4A1P11836 297 aa13.05□□□□□ -0.32
NUP58-209ENST00000476553 ZFP42Q96MM3 310 aa13.04□□□□□ -0.32
NUP58-209ENST00000476553 TLL2Q9Y6L7 1015 aa13.04□□□□□ -0.32
NUP58-209ENST00000476553 FDX1P10109 184 aa13.03□□□□□ -0.32
NUP58-209ENST00000476553 PTPRNQ16849 979 aa13.03□□□□□ -0.32
NUP58-209ENST00000476553 NUTM1Q86Y26 1132 aa13.03□□□□□ -0.32
NUP58-209ENST00000476553 UNC93B1Q9H1C4 597 aa13.02□□□□□ -0.33
NUP58-209ENST00000476553 MPNDQ8N594 471 aa13□□□□□ -0.33
NUP58-209ENST00000476553 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
NUP58-209ENST00000476553 EVA1BQ9NVM1 165 aa12.99□□□□□ -0.33
NUP58-209ENST00000476553 LOC100996750A0A140TA64 210 aa12.98□□□□□ -0.33
NUP58-209ENST00000476553 LINC01559Q495D7 138 aa12.98□□□□□ -0.33
NUP58-209ENST00000476553 KRTAP4-6Q9BYQ5 205 aa12.98□□□□□ -0.33
NUP58-209ENST00000476553 VSIG8P0DPA2 414 aa12.97□□□□□ -0.33
NUP58-209ENST00000476553 NNTQ13423 1086 aa12.97□□□□□ -0.33
NUP58-209ENST00000476553 MRPL14Q6P1L8 145 aaKnown RBP12.97□□□□□ -0.33
NUP58-209ENST00000476553 ZNF511Q8NB15 262 aa12.97□□□□□ -0.33
NUP58-209ENST00000476553 BAP1Q92560 729 aa12.96□□□□□ -0.33
NUP58-209ENST00000476553 TIMP2P16035 220 aa12.95□□□□□ -0.34
NUP58-209ENST00000476553 VARSP26640 1264 aaKnown RBP12.95□□□□□ -0.34
NUP58-209ENST00000476553 KCNH2Q12809 1159 aa12.95□□□□□ -0.34
NUP58-209ENST00000476553 PLEKHG3A1L390 1219 aa12.94□□□□□ -0.34
NUP58-209ENST00000476553 ADH1CP00326 375 aa12.93□□□□□ -0.34
NUP58-209ENST00000476553 SPIRE2Q8WWL2 714 aa12.93□□□□□ -0.34
NUP58-209ENST00000476553 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
NUP58-209ENST00000476553 DESI1Q6ICB0 168 aa12.92□□□□□ -0.34
NUP58-209ENST00000476553 KLF16Q9BXK1 252 aaPredicted RBP12.92□□□□□ -0.34
NUP58-209ENST00000476553 PURBQ96QR8 312 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms