RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 ROBO1Q9Y6N7 1651 aa19.78■□□□□ 0.76
RAB5A-208ENST00000476544 NUTM2FA1L443 756 aa19.77■□□□□ 0.76
RAB5A-208ENST00000476544 NBPF8Q3BBV2 869 aa19.77■□□□□ 0.76
RAB5A-208ENST00000476544 DISP3Q9P2K9 1392 aa19.76■□□□□ 0.75
RAB5A-208ENST00000476544 ILDR2Q71H61 639 aa19.75■□□□□ 0.75
RAB5A-208ENST00000476544 POGKQ9P215 609 aa19.75■□□□□ 0.75
RAB5A-208ENST00000476544 ESCO1Q5FWF5 840 aa19.73■□□□□ 0.75
RAB5A-208ENST00000476544 RGS17Q9UGC6 210 aaPredicted RBP19.73■□□□□ 0.75
RAB5A-208ENST00000476544 NALCNQ8IZF0 1738 aa19.73■□□□□ 0.75
RAB5A-208ENST00000476544 HIRIP3Q9BW71 556 aaPredicted RBP19.72■□□□□ 0.75
RAB5A-208ENST00000476544 FOXO3O43524 673 aa19.7■□□□□ 0.74
RAB5A-208ENST00000476544 DLC1Q96QB1 1528 aa19.7■□□□□ 0.74
RAB5A-208ENST00000476544 SOS2Q07890 1332 aaPredicted RBP19.7■□□□□ 0.74
RAB5A-208ENST00000476544 MINK1Q8N4C8 1332 aaPredicted RBP19.7■□□□□ 0.74
RAB5A-208ENST00000476544 JCADQ9P266 1359 aa19.69■□□□□ 0.74
RAB5A-208ENST00000476544 LRRC59Q96AG4 307 aaKnown RBP19.68■□□□□ 0.74
RAB5A-208ENST00000476544 AHDC1Q5TGY3 1603 aaPredicted RBP19.68■□□□□ 0.74
RAB5A-208ENST00000476544 WASLO00401 505 aaPredicted RBP19.67■□□□□ 0.74
RAB5A-208ENST00000476544 PRR36Q9H6K5 1346 aa19.67■□□□□ 0.74
RAB5A-208ENST00000476544 XPCQ01831 940 aaPredicted RBP19.66■□□□□ 0.74
RAB5A-208ENST00000476544 COL16A1Q07092 1604 aaPredicted RBP19.65■□□□□ 0.74
RAB5A-208ENST00000476544 LAMC1P11047 1609 aa19.65■□□□□ 0.74
RAB5A-208ENST00000476544 KNDC1Q76NI1 1749 aa19.65■□□□□ 0.74
RAB5A-208ENST00000476544 CDC42BPGQ6DT37 1551 aa19.64■□□□□ 0.73
RAB5A-208ENST00000476544 MED1Q15648 1581 aaPredicted RBP19.63■□□□□ 0.73
RAB5A-208ENST00000476544 PHF8Q9UPP1 1060 aa19.63■□□□□ 0.73
RAB5A-208ENST00000476544 CDK19Q9BWU1 502 aa19.62■□□□□ 0.73
RAB5A-208ENST00000476544 SPATA31A6Q5VVP1 1343 aa19.61■□□□□ 0.73
RAB5A-208ENST00000476544 PHLPP1O60346 1717 aa19.6■□□□□ 0.73
RAB5A-208ENST00000476544 KRT28Q7Z3Y7 464 aa19.6■□□□□ 0.73
RAB5A-208ENST00000476544 PMFBP1Q8TBY8 1022 aa19.6■□□□□ 0.73
RAB5A-208ENST00000476544 PNPLA6Q8IY17 1366 aa19.59■□□□□ 0.73
RAB5A-208ENST00000476544 NPHP3Q7Z494 1330 aa19.59■□□□□ 0.73
RAB5A-208ENST00000476544 NUTM2BA6NNL0 878 aaPredicted RBP19.59■□□□□ 0.73
RAB5A-208ENST00000476544 NUTM2EB1AL46 878 aaPredicted RBP19.59■□□□□ 0.73
RAB5A-208ENST00000476544 NUTM2AQ8IVF1 878 aaPredicted RBP19.59■□□□□ 0.73
RAB5A-208ENST00000476544 POTEAQ6S8J7 498 aa19.58■□□□□ 0.72
RAB5A-208ENST00000476544 NUDT16Q96DE0 195 aaKnown RBP19.58■□□□□ 0.72
RAB5A-208ENST00000476544 LRP6O75581 1613 aa19.58■□□□□ 0.72
RAB5A-208ENST00000476544 GPRASP1Q5JY77 1395 aa19.57■□□□□ 0.72
RAB5A-208ENST00000476544 TONSLQ96HA7 1378 aa19.57■□□□□ 0.72
RAB5A-208ENST00000476544 CENPJQ9HC77 1338 aaPredicted RBP19.56■□□□□ 0.72
RAB5A-208ENST00000476544 PXDNQ92626 1479 aa19.56■□□□□ 0.72
RAB5A-208ENST00000476544 NHSL1Q5SYE7 1610 aa19.55■□□□□ 0.72
RAB5A-208ENST00000476544 ANKARQ7Z5J8 1434 aa19.55■□□□□ 0.72
RAB5A-208ENST00000476544 ROCK2O75116 1388 aaKnown RBP19.55■□□□□ 0.72
RAB5A-208ENST00000476544 SPATA31A3Q5VYP0 1347 aa19.54■□□□□ 0.72
RAB5A-208ENST00000476544 PHF23Q9BUL5 403 aaPredicted RBP19.54■□□□□ 0.72
RAB5A-208ENST00000476544 KIAA1210Q9ULL0 1709 aa19.54■□□□□ 0.72
RAB5A-208ENST00000476544 CABP2Q9NPB3 220 aa19.53■□□□□ 0.72
RAB5A-208ENST00000476544 FMN2Q9NZ56 1722 aa19.53■□□□□ 0.72
RAB5A-208ENST00000476544 PSME1Q06323 249 aa19.52■□□□□ 0.72
RAB5A-208ENST00000476544 ADGRB2O60241 1585 aa19.52■□□□□ 0.71
RAB5A-208ENST00000476544 PLEKHG3A1L390 1219 aa19.51■□□□□ 0.71
RAB5A-208ENST00000476544 CARD11Q9BXL7 1154 aa19.51■□□□□ 0.71
RAB5A-208ENST00000476544 CCDC61Q9Y6R9 512 aa19.51■□□□□ 0.71
RAB5A-208ENST00000476544 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
RAB5A-208ENST00000476544 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
RAB5A-208ENST00000476544 ADAMTS2O95450 1211 aa19.49■□□□□ 0.71
RAB5A-208ENST00000476544 ARHGEF28Q8N1W1 1705 aaKnown RBP19.48■□□□□ 0.71
RAB5A-208ENST00000476544 CABLES1Q8TDN4 633 aa19.48■□□□□ 0.71
RAB5A-208ENST00000476544 TRPM1Q7Z4N2 1603 aa19.47■□□□□ 0.71
RAB5A-208ENST00000476544 TULP4Q9NRJ4 1543 aa19.47■□□□□ 0.71
RAB5A-208ENST00000476544 TIMELESSQ9UNS1 1208 aa19.47■□□□□ 0.71
RAB5A-208ENST00000476544 SBNO1A3KN83 1393 aa19.46■□□□□ 0.71
RAB5A-208ENST00000476544 MEX3CQ5U5Q3 659 aaKnown RBP19.46■□□□□ 0.71
RAB5A-208ENST00000476544 NGDNQ8NEJ9 315 aaKnown RBP19.46■□□□□ 0.71
RAB5A-208ENST00000476544 CCER1Q8TC90 406 aaPredicted RBP19.46■□□□□ 0.71
RAB5A-208ENST00000476544 ATP7BP35670 1465 aa19.46■□□□□ 0.71
RAB5A-208ENST00000476544 ACEP12821 1306 aa19.46■□□□□ 0.71
RAB5A-208ENST00000476544 EIF3AQ14152 1382 aaKnown RBP19.45■□□□□ 0.7
RAB5A-208ENST00000476544 SRPK2P78362 688 aaKnown RBP19.45■□□□□ 0.7
RAB5A-208ENST00000476544 CABP1Q9NZU7 370 aa19.45■□□□□ 0.7
RAB5A-208ENST00000476544 SHPRHQ149N8 1683 aa19.45■□□□□ 0.7
RAB5A-208ENST00000476544 C8orf37Q96NL8 207 aa19.44■□□□□ 0.7
RAB5A-208ENST00000476544 RALGAPBQ86X10 1494 aa19.43■□□□□ 0.7
RAB5A-208ENST00000476544 FNBP4Q8N3X1 1017 aaPredicted RBP19.43■□□□□ 0.7
RAB5A-208ENST00000476544 TESK2Q96S53 571 aa19.43■□□□□ 0.7
RAB5A-208ENST00000476544 AFF2P51816 1311 aa19.43■□□□□ 0.7
RAB5A-208ENST00000476544 POLR3AO14802 1390 aaPredicted RBP19.43■□□□□ 0.7
RAB5A-208ENST00000476544 RGPD8O14715 1765 aaPredicted RBP19.42■□□□□ 0.7
RAB5A-208ENST00000476544 ST20-MTHFSA0A0A6YYL1 179 aa19.42■□□□□ 0.7
RAB5A-208ENST00000476544 NGLY1Q96IV0 654 aa19.42■□□□□ 0.7
RAB5A-208ENST00000476544 SOCS7O14512 581 aa19.41■□□□□ 0.7
RAB5A-208ENST00000476544 LMOD2Q6P5Q4 547 aa19.41■□□□□ 0.7
RAB5A-208ENST00000476544 EVC2Q86UK5 1308 aa19.41■□□□□ 0.7
RAB5A-208ENST00000476544 PLEKHG5O94827 1062 aa19.4■□□□□ 0.7
RAB5A-208ENST00000476544 ZNF772Q68DY9 489 aaPredicted RBP19.4■□□□□ 0.7
RAB5A-208ENST00000476544 TNS3Q68CZ2 1445 aa19.4■□□□□ 0.7
RAB5A-208ENST00000476544 QTRT2Q9H974 415 aaKnown RBP19.38■□□□□ 0.69
RAB5A-208ENST00000476544 FAM83GA6ND36 823 aa19.37■□□□□ 0.69
RAB5A-208ENST00000476544 PAK3O75914 559 aaPredicted RBP19.37■□□□□ 0.69
RAB5A-208ENST00000476544 KIF1AQ12756 1690 aa19.36■□□□□ 0.69
RAB5A-208ENST00000476544 PPIP5K1Q6PFW1 1433 aa19.36■□□□□ 0.69
RAB5A-208ENST00000476544 SBNO2Q9Y2G9 1366 aa19.36■□□□□ 0.69
RAB5A-208ENST00000476544 NUTM2GQ5VZR2 741 aa19.35■□□□□ 0.69
RAB5A-208ENST00000476544 COL22A1Q8NFW1 1626 aaPredicted RBP19.35■□□□□ 0.69
RAB5A-208ENST00000476544 ARHGEF10O15013 1369 aa19.34■□□□□ 0.69
RAB5A-208ENST00000476544 USP21Q9UK80 565 aa19.34■□□□□ 0.69
RAB5A-208ENST00000476544 BCL9LQ86UU0 1499 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms