RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 C19orf44Q9H6X5 657 aa20.55■□□□□ 0.88
CCNL1-217ENST00000476367 DCCP43146 1447 aa20.54■□□□□ 0.88
CCNL1-217ENST00000476367 SAFB2Q14151 953 aaKnown RBP eCLIP20.54■□□□□ 0.88
CCNL1-217ENST00000476367 PRAM1Q96QH2 718 aa20.54■□□□□ 0.88
CCNL1-217ENST00000476367 ILDR1Q86SU0 546 aaPredicted RBP20.53■□□□□ 0.88
CCNL1-217ENST00000476367 CDC42BPGQ6DT37 1551 aa20.53■□□□□ 0.88
CCNL1-217ENST00000476367 ATF3P18847 181 aa20.53■□□□□ 0.88
CCNL1-217ENST00000476367 POGKQ9P215 609 aa20.52■□□□□ 0.88
CCNL1-217ENST00000476367 ROBO1Q9Y6N7 1651 aa20.52■□□□□ 0.87
CCNL1-217ENST00000476367 CADPS2Q86UW7 1296 aa20.5■□□□□ 0.87
CCNL1-217ENST00000476367 QRICH2Q9H0J4 1663 aa20.49■□□□□ 0.87
CCNL1-217ENST00000476367 SIRT1Q96EB6 747 aa20.49■□□□□ 0.87
CCNL1-217ENST00000476367 FMN2Q9NZ56 1722 aa20.48■□□□□ 0.87
CCNL1-217ENST00000476367 MST1RQ04912 1400 aa20.48■□□□□ 0.87
CCNL1-217ENST00000476367 ADGRB2O60241 1585 aa20.48■□□□□ 0.87
CCNL1-217ENST00000476367 SLAIN2Q9P270 581 aa20.46■□□□□ 0.87
CCNL1-217ENST00000476367 MINK1Q8N4C8 1332 aaPredicted RBP20.45■□□□□ 0.86
CCNL1-217ENST00000476367 HIRIP3Q9BW71 556 aaPredicted RBP20.44■□□□□ 0.86
CCNL1-217ENST00000476367 CARD11Q9BXL7 1154 aa20.44■□□□□ 0.86
CCNL1-217ENST00000476367 RGPD8O14715 1765 aaPredicted RBP20.44■□□□□ 0.86
CCNL1-217ENST00000476367 NUTM2FA1L443 756 aa20.42■□□□□ 0.86
CCNL1-217ENST00000476367 CENPJQ9HC77 1338 aaPredicted RBP20.42■□□□□ 0.86
CCNL1-217ENST00000476367 EIF3AQ14152 1382 aaKnown RBP20.42■□□□□ 0.86
CCNL1-217ENST00000476367 C1orf167Q5SNV9 1468 aa20.41■□□□□ 0.86
CCNL1-217ENST00000476367 PHLPP1O60346 1717 aa20.4■□□□□ 0.86
CCNL1-217ENST00000476367 USP32Q8NFA0 1604 aa20.39■□□□□ 0.85
CCNL1-217ENST00000476367 USP47Q96K76 1375 aa20.38■□□□□ 0.85
CCNL1-217ENST00000476367 BRINP3Q76B58 766 aa20.38■□□□□ 0.85
CCNL1-217ENST00000476367 NHSL1Q5SYE7 1610 aa20.37■□□□□ 0.85
CCNL1-217ENST00000476367 HSPA1LP34931 641 aa20.37■□□□□ 0.85
CCNL1-217ENST00000476367 ZEB1P37275 1124 aaPredicted RBP20.37■□□□□ 0.85
CCNL1-217ENST00000476367 TULP4Q9NRJ4 1543 aa20.36■□□□□ 0.85
CCNL1-217ENST00000476367 AHDC1Q5TGY3 1603 aaPredicted RBP20.35■□□□□ 0.85
CCNL1-217ENST00000476367 ST20-MTHFSA0A0A6YYL1 179 aa20.35■□□□□ 0.85
CCNL1-217ENST00000476367 TESK2Q96S53 571 aa20.35■□□□□ 0.85
CCNL1-217ENST00000476367 ORAI2Q96SN7 254 aa20.35■□□□□ 0.85
CCNL1-217ENST00000476367 ITSN1Q15811 1721 aa20.34■□□□□ 0.85
CCNL1-217ENST00000476367 WASLO00401 505 aaPredicted RBP20.34■□□□□ 0.85
CCNL1-217ENST00000476367 KIF1AQ12756 1690 aa20.34■□□□□ 0.85
CCNL1-217ENST00000476367 ESCO1Q5FWF5 840 aa20.33■□□□□ 0.84
CCNL1-217ENST00000476367 COL16A1Q07092 1604 aaPredicted RBP20.33■□□□□ 0.84
CCNL1-217ENST00000476367 ANKARQ7Z5J8 1434 aa20.32■□□□□ 0.84
CCNL1-217ENST00000476367 ATP7BP35670 1465 aa20.31■□□□□ 0.84
CCNL1-217ENST00000476367 TOPAZ1Q8N9V7 1692 aa20.31■□□□□ 0.84
CCNL1-217ENST00000476367 SBNO2Q9Y2G9 1366 aa20.31■□□□□ 0.84
CCNL1-217ENST00000476367 DDX17Q92841 729 aaKnown RBP20.31■□□□□ 0.84
CCNL1-217ENST00000476367 PRR36Q9H6K5 1346 aa20.3■□□□□ 0.84
CCNL1-217ENST00000476367 HSPA5P11021 654 aaKnown RBP20.3■□□□□ 0.84
CCNL1-217ENST00000476367 CDK19Q9BWU1 502 aa20.29■□□□□ 0.84
CCNL1-217ENST00000476367 SRPK2P78362 688 aaKnown RBP20.27■□□□□ 0.84
CCNL1-217ENST00000476367 EIF4G2P78344 907 aaKnown RBP eCLIP20.27■□□□□ 0.83
CCNL1-217ENST00000476367 EVC2Q86UK5 1308 aa20.26■□□□□ 0.83
CCNL1-217ENST00000476367 CABP2Q9NPB3 220 aa20.25■□□□□ 0.83
CCNL1-217ENST00000476367 PHF8Q9UPP1 1060 aa20.25■□□□□ 0.83
CCNL1-217ENST00000476367 NUDT16Q96DE0 195 aaKnown RBP20.24■□□□□ 0.83
CCNL1-217ENST00000476367 FOXO3O43524 673 aa20.24■□□□□ 0.83
CCNL1-217ENST00000476367 PMFBP1Q8TBY8 1022 aa20.24■□□□□ 0.83
CCNL1-217ENST00000476367 DISP3Q9P2K9 1392 aa20.23■□□□□ 0.83
CCNL1-217ENST00000476367 C11orf95C9JLR9 678 aaPredicted RBP20.23■□□□□ 0.83
CCNL1-217ENST00000476367 XPCQ01831 940 aaPredicted RBP20.23■□□□□ 0.83
CCNL1-217ENST00000476367 NPHP3Q7Z494 1330 aa20.23■□□□□ 0.83
CCNL1-217ENST00000476367 PXDNQ92626 1479 aa20.22■□□□□ 0.83
CCNL1-217ENST00000476367 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
CCNL1-217ENST00000476367 PPIP5K1Q6PFW1 1433 aa20.2■□□□□ 0.82
CCNL1-217ENST00000476367 SOS2Q07890 1332 aaPredicted RBP20.19■□□□□ 0.82
CCNL1-217ENST00000476367 CCDC61Q9Y6R9 512 aa20.18■□□□□ 0.82
CCNL1-217ENST00000476367 JCADQ9P266 1359 aa20.18■□□□□ 0.82
CCNL1-217ENST00000476367 TRPM3Q9HCF6 1732 aaPredicted RBP20.17■□□□□ 0.82
CCNL1-217ENST00000476367 NGDNQ8NEJ9 315 aaKnown RBP20.16■□□□□ 0.82
CCNL1-217ENST00000476367 ATAD2Q6PL18 1390 aa20.16■□□□□ 0.82
CCNL1-217ENST00000476367 KRT28Q7Z3Y7 464 aa20.15■□□□□ 0.82
CCNL1-217ENST00000476367 LRRC59Q96AG4 307 aaKnown RBP20.15■□□□□ 0.82
CCNL1-217ENST00000476367 MYOM1P52179 1685 aa20.15■□□□□ 0.82
CCNL1-217ENST00000476367 PSME1Q06323 249 aa20.14■□□□□ 0.81
CCNL1-217ENST00000476367 AKAP12Q02952 1782 aa20.14■□□□□ 0.81
CCNL1-217ENST00000476367 PNPLA6Q8IY17 1366 aa20.13■□□□□ 0.81
CCNL1-217ENST00000476367 ACEP12821 1306 aa20.13■□□□□ 0.81
CCNL1-217ENST00000476367 MED1Q15648 1581 aaPredicted RBP20.13■□□□□ 0.81
CCNL1-217ENST00000476367 TMF1P82094 1093 aa20.13■□□□□ 0.81
CCNL1-217ENST00000476367 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
CCNL1-217ENST00000476367 POLR3AO14802 1390 aaPredicted RBP20.12■□□□□ 0.81
CCNL1-217ENST00000476367 TNS3Q68CZ2 1445 aa20.12■□□□□ 0.81
CCNL1-217ENST00000476367 PLEKHG3A1L390 1219 aa20.11■□□□□ 0.81
CCNL1-217ENST00000476367 ALS2Q96Q42 1657 aa20.11■□□□□ 0.81
CCNL1-217ENST00000476367 COL22A1Q8NFW1 1626 aaPredicted RBP20.11■□□□□ 0.81
CCNL1-217ENST00000476367 SLC24A1O60721 1099 aa20.09■□□□□ 0.81
CCNL1-217ENST00000476367 PUS7Q96PZ0 661 aaKnown RBP20.09■□□□□ 0.81
CCNL1-217ENST00000476367 SPATA31A3Q5VYP0 1347 aa20.09■□□□□ 0.81
CCNL1-217ENST00000476367 MON2Q7Z3U7 1717 aa20.09■□□□□ 0.81
CCNL1-217ENST00000476367 LMOD2Q6P5Q4 547 aa20.09■□□□□ 0.81
CCNL1-217ENST00000476367 KIF7Q2M1P5 1343 aa20.08■□□□□ 0.81
CCNL1-217ENST00000476367 WASHC2AQ641Q2 1341 aa20.08■□□□□ 0.81
CCNL1-217ENST00000476367 CD163L1Q9NR16 1453 aa20.08■□□□□ 0.81
CCNL1-217ENST00000476367 LRP6O75581 1613 aa20.08■□□□□ 0.81
CCNL1-217ENST00000476367 SBNO1A3KN83 1393 aa20.08■□□□□ 0.81
CCNL1-217ENST00000476367 TMC1Q8TDI8 760 aa20.08■□□□□ 0.8
CCNL1-217ENST00000476367 ABCA3Q99758 1704 aa20.07■□□□□ 0.8
CCNL1-217ENST00000476367 PAK3O75914 559 aaPredicted RBP20.07■□□□□ 0.8
CCNL1-217ENST00000476367 SPATA31A6Q5VVP1 1343 aa20.07■□□□□ 0.8
CCNL1-217ENST00000476367 NRKQ7Z2Y5 1582 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms