RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 GGT6Q6P531 493 aa10.94□□□□□ -0.66
COL11A1-209ENST00000475980 POTEEQ6S8J3 1075 aa10.94□□□□□ -0.66
COL11A1-209ENST00000475980 IFFO2Q5TF58 517 aa10.93□□□□□ -0.66
COL11A1-209ENST00000475980 ZNF772Q68DY9 489 aaPredicted RBP10.93□□□□□ -0.66
COL11A1-209ENST00000475980 PLEKHH2Q8IVE3 1493 aa10.93□□□□□ -0.66
COL11A1-209ENST00000475980 COL16A1Q07092 1604 aaPredicted RBP10.92□□□□□ -0.66
COL11A1-209ENST00000475980 ADGRD1Q6QNK2 874 aa10.92□□□□□ -0.66
COL11A1-209ENST00000475980 LRP6O75581 1613 aa10.91□□□□□ -0.66
COL11A1-209ENST00000475980 MAP3K1Q13233 1512 aa10.91□□□□□ -0.66
COL11A1-209ENST00000475980 FGD6Q6ZV73 1430 aa10.91□□□□□ -0.66
COL11A1-209ENST00000475980 SHPRHQ149N8 1683 aa10.9□□□□□ -0.66
COL11A1-209ENST00000475980 SCAF11Q99590 1463 aaKnown RBP10.9□□□□□ -0.66
COL11A1-209ENST00000475980 FBXO31Q5XUX0 539 aaPredicted RBP10.9□□□□□ -0.66
COL11A1-209ENST00000475980 UBR1Q8IWV7 1749 aa10.89□□□□□ -0.67
COL11A1-209ENST00000475980 SPATA31A6Q5VVP1 1343 aa10.89□□□□□ -0.67
COL11A1-209ENST00000475980 RANGAP1P46060 587 aaPredicted RBP10.89□□□□□ -0.67
COL11A1-209ENST00000475980 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
COL11A1-209ENST00000475980 EHMT2Q96KQ7 1210 aa10.89□□□□□ -0.67
COL11A1-209ENST00000475980 SLIT1O75093 1534 aa10.89□□□□□ -0.67
COL11A1-209ENST00000475980 EP400Q96L91 3159 aa10.88□□□□□ -0.67
COL11A1-209ENST00000475980 A0A0G2JS52 829 aa10.88□□□□□ -0.67
COL11A1-209ENST00000475980 CCDC18Q5T9S5 1454 aa10.87□□□□□ -0.67
COL11A1-209ENST00000475980 ARHGAP23Q9P227 1491 aa10.87□□□□□ -0.67
COL11A1-209ENST00000475980 TIAM1Q13009 1591 aa10.87□□□□□ -0.67
COL11A1-209ENST00000475980 EEA1Q15075 1411 aa10.87□□□□□ -0.67
COL11A1-209ENST00000475980 RXRBP28702 533 aa10.87□□□□□ -0.67
COL11A1-209ENST00000475980 KCTD12Q96CX2 325 aaKnown RBP10.87□□□□□ -0.67
COL11A1-209ENST00000475980 GPATCH8Q9UKJ3 1502 aaKnown RBP10.87□□□□□ -0.67
COL11A1-209ENST00000475980 RTEL1-TNFRSF6BF6WH68 1400 aa10.86□□□□□ -0.67
COL11A1-209ENST00000475980 ABCC3O15438 1527 aa10.86□□□□□ -0.67
COL11A1-209ENST00000475980 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
COL11A1-209ENST00000475980 EFCAB3Q8N7B9 438 aa10.86□□□□□ -0.67
COL11A1-209ENST00000475980 TMEM94Q12767 1356 aa10.86□□□□□ -0.67
COL11A1-209ENST00000475980 DHX29Q7Z478 1369 aaKnown RBP10.86□□□□□ -0.67
COL11A1-209ENST00000475980 SETBP1Q9Y6X0 1596 aa10.86□□□□□ -0.67
COL11A1-209ENST00000475980 ARHGAP35Q9NRY4 1499 aa10.85□□□□□ -0.67
COL11A1-209ENST00000475980 PRDM15P57071 1507 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-209ENST00000475980 LRP5O75197 1615 aa10.84□□□□□ -0.67
COL11A1-209ENST00000475980 NUDT7P0C024 238 aa10.84□□□□□ -0.67
COL11A1-209ENST00000475980 ATP1B4Q9UN42 357 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-209ENST00000475980 NKTRP30414 1462 aaKnown RBP10.84□□□□□ -0.67
COL11A1-209ENST00000475980 CAMSAP2Q08AD1 1489 aa10.84□□□□□ -0.67
COL11A1-209ENST00000475980 NWD1Q149M9 1564 aa10.84□□□□□ -0.67
COL11A1-209ENST00000475980 RGS12O14924 1447 aa10.84□□□□□ -0.67
COL11A1-209ENST00000475980 HNRNPMP52272 730 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL11A1-209ENST00000475980 AHDC1Q5TGY3 1603 aaPredicted RBP10.83□□□□□ -0.68
COL11A1-209ENST00000475980 NCOA2Q15596 1464 aa10.82□□□□□ -0.68
COL11A1-209ENST00000475980 ARHGAP33O14559 1287 aa10.82□□□□□ -0.68
COL11A1-209ENST00000475980 LHX6Q9UPM6 363 aa10.82□□□□□ -0.68
COL11A1-209ENST00000475980 WASHC2CQ9Y4E1 1318 aa10.82□□□□□ -0.68
COL11A1-209ENST00000475980 ERVK-7P63135 1459 aa10.81□□□□□ -0.68
COL11A1-209ENST00000475980 MEX3CQ5U5Q3 659 aaKnown RBP10.81□□□□□ -0.68
COL11A1-209ENST00000475980 KDM5AP29375 1690 aaKnown RBP10.8□□□□□ -0.68
COL11A1-209ENST00000475980 TK2O00142 265 aa10.8□□□□□ -0.68
COL11A1-209ENST00000475980 ZNF777Q9ULD5 760 aaPredicted RBP10.8□□□□□ -0.68
COL11A1-209ENST00000475980 MBD5Q9P267 1494 aa10.8□□□□□ -0.68
COL11A1-209ENST00000475980 ATAD2Q6PL18 1390 aa10.79□□□□□ -0.68
COL11A1-209ENST00000475980 DIP2AQ14689 1571 aa10.79□□□□□ -0.68
COL11A1-209ENST00000475980 HRO43593 1189 aa10.79□□□□□ -0.68
COL11A1-209ENST00000475980 MSH6P52701 1360 aa10.78□□□□□ -0.68
COL11A1-209ENST00000475980 CASKIN1Q8WXD9 1431 aa10.78□□□□□ -0.68
COL11A1-209ENST00000475980 KCNA6P17658 529 aa10.78□□□□□ -0.68
COL11A1-209ENST00000475980 SLAIN2Q9P270 581 aa10.78□□□□□ -0.68
COL11A1-209ENST00000475980 KIF3BO15066 747 aa10.77□□□□□ -0.69
COL11A1-209ENST00000475980 LTKP29376 864 aa10.77□□□□□ -0.69
COL11A1-209ENST00000475980 PTPN5P54829 565 aa10.77□□□□□ -0.69
COL11A1-209ENST00000475980 STAC3Q96MF2 364 aa10.77□□□□□ -0.69
COL11A1-209ENST00000475980 TET3O43151 1660 aa10.76□□□□□ -0.69
COL11A1-209ENST00000475980 RBM6P78332 1123 aaKnown RBP10.75□□□□□ -0.69
COL11A1-209ENST00000475980 TXNDC2Q86VQ3 553 aa10.75□□□□□ -0.69
COL11A1-209ENST00000475980 CFDP1Q9UEE9 299 aaPredicted RBP10.75□□□□□ -0.69
COL11A1-209ENST00000475980 TRAF7Q6Q0C0 670 aa10.74□□□□□ -0.69
COL11A1-209ENST00000475980 AFF2P51816 1311 aa10.74□□□□□ -0.69
COL11A1-209ENST00000475980 NCOA3Q9Y6Q9 1424 aa10.74□□□□□ -0.69
COL11A1-209ENST00000475980 FYCO1Q9BQS8 1478 aa10.74□□□□□ -0.69
COL11A1-209ENST00000475980 EIF2AK4Q9P2K8 1649 aaKnown RBP10.73□□□□□ -0.69
COL11A1-209ENST00000475980 PROSER2Q86WR7 435 aaPredicted RBP10.73□□□□□ -0.69
COL11A1-209ENST00000475980 FBXO3Q9UK99 471 aa10.73□□□□□ -0.69
COL11A1-209ENST00000475980 EID1Q9Y6B2 187 aa10.73□□□□□ -0.69
COL11A1-209ENST00000475980 TMEM2Q9UHN6 1383 aa10.73□□□□□ -0.69
COL11A1-209ENST00000475980 NHSL1Q5SYE7 1610 aa10.73□□□□□ -0.69
COL11A1-209ENST00000475980 CCDC125Q86Z20 511 aa10.72□□□□□ -0.69
COL11A1-209ENST00000475980 RBM33Q96EV2 1170 aaKnown RBP10.72□□□□□ -0.69
COL11A1-209ENST00000475980 CCNB3Q8WWL7 1395 aa10.72□□□□□ -0.69
COL11A1-209ENST00000475980 PIK3C2BO00750 1634 aa10.72□□□□□ -0.69
COL11A1-209ENST00000475980 MROH1Q8NDA8 1641 aa10.72□□□□□ -0.69
COL11A1-209ENST00000475980 CHD2O14647 1828 aaKnown RBP10.72□□□□□ -0.69
COL11A1-209ENST00000475980 NUTM2BA6NNL0 878 aaPredicted RBP10.71□□□□□ -0.69
COL11A1-209ENST00000475980 NUTM2EB1AL46 878 aaPredicted RBP10.71□□□□□ -0.69
COL11A1-209ENST00000475980 CEP152O94986 1710 aa10.71□□□□□ -0.69
COL11A1-209ENST00000475980 NUTM2DQ5VT03 806 aaPredicted RBP10.71□□□□□ -0.69
COL11A1-209ENST00000475980 CCDC141Q6ZP82 1450 aa10.71□□□□□ -0.69
COL11A1-209ENST00000475980 CFAP65Q6ZU64 1925 aaKnown RBP10.71□□□□□ -0.69
COL11A1-209ENST00000475980 NUTM2AQ8IVF1 878 aaPredicted RBP10.71□□□□□ -0.69
COL11A1-209ENST00000475980 SOX12O15370 315 aa10.7□□□□□ -0.7
COL11A1-209ENST00000475980 MS4A4AQ96JQ5 239 aa10.7□□□□□ -0.7
COL11A1-209ENST00000475980 ARHGAP31Q2M1Z3 1444 aa10.69□□□□□ -0.7
COL11A1-209ENST00000475980 SETD5Q9C0A6 1442 aa10.69□□□□□ -0.7
COL11A1-209ENST00000475980 LAPTM4AQ15012 233 aa10.69□□□□□ -0.7
COL11A1-209ENST00000475980 DMRTA1Q5VZB9 504 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms