RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 LAMC1P11047 1609 aa13.71□□□□□ -0.22
SEMA3C-208ENST00000475955 PLEKHH1Q9ULM0 1364 aa13.71□□□□□ -0.22
SEMA3C-208ENST00000475955 C1orf167Q5SNV9 1468 aa13.7□□□□□ -0.22
SEMA3C-208ENST00000475955 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
SEMA3C-208ENST00000475955 WAPLQ7Z5K2 1190 aa13.7□□□□□ -0.22
SEMA3C-208ENST00000475955 DDX17Q92841 729 aaKnown RBP13.7□□□□□ -0.22
SEMA3C-208ENST00000475955 C14orf93Q9H972 538 aaKnown RBP13.7□□□□□ -0.22
SEMA3C-208ENST00000475955 RGPD8O14715 1765 aaPredicted RBP13.7□□□□□ -0.22
SEMA3C-208ENST00000475955 ABCC11Q96J66 1382 aa13.7□□□□□ -0.22
SEMA3C-208ENST00000475955 JCADQ9P266 1359 aa13.7□□□□□ -0.22
SEMA3C-208ENST00000475955 LRP6O75581 1613 aa13.69□□□□□ -0.22
SEMA3C-208ENST00000475955 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
SEMA3C-208ENST00000475955 CDC42BPGQ6DT37 1551 aa13.69□□□□□ -0.22
SEMA3C-208ENST00000475955 SOCS7O14512 581 aa13.68□□□□□ -0.22
SEMA3C-208ENST00000475955 DHX57Q6P158 1386 aaKnown RBP13.68□□□□□ -0.22
SEMA3C-208ENST00000475955 ORAI2Q96SN7 254 aa13.67□□□□□ -0.22
SEMA3C-208ENST00000475955 PHF23Q9BUL5 403 aaPredicted RBP13.67□□□□□ -0.22
SEMA3C-208ENST00000475955 FMN2Q9NZ56 1722 aa13.67□□□□□ -0.22
SEMA3C-208ENST00000475955 ADGRB1O14514 1584 aa13.66□□□□□ -0.22
SEMA3C-208ENST00000475955 KDM2AQ9Y2K7 1162 aa13.65□□□□□ -0.22
SEMA3C-208ENST00000475955 DCAF11Q8TEB1 546 aa13.64□□□□□ -0.23
SEMA3C-208ENST00000475955 POTEAQ6S8J7 498 aa13.63□□□□□ -0.23
SEMA3C-208ENST00000475955 MIER1Q8N108 512 aa13.63□□□□□ -0.23
SEMA3C-208ENST00000475955 SIRT1Q96EB6 747 aa13.62□□□□□ -0.23
SEMA3C-208ENST00000475955 DLC1Q96QB1 1528 aa13.62□□□□□ -0.23
SEMA3C-208ENST00000475955 SPATA31A6Q5VVP1 1343 aa13.62□□□□□ -0.23
SEMA3C-208ENST00000475955 NUTM2FA1L443 756 aa13.61□□□□□ -0.23
SEMA3C-208ENST00000475955 SOS2Q07890 1332 aaPredicted RBP13.61□□□□□ -0.23
SEMA3C-208ENST00000475955 PNPLA6Q8IY17 1366 aa13.6□□□□□ -0.23
SEMA3C-208ENST00000475955 ARHGEF28Q8N1W1 1705 aaKnown RBP13.6□□□□□ -0.23
SEMA3C-208ENST00000475955 USP32Q8NFA0 1604 aa13.6□□□□□ -0.23
SEMA3C-208ENST00000475955 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
SEMA3C-208ENST00000475955 PRAM1Q96QH2 718 aa13.59□□□□□ -0.23
SEMA3C-208ENST00000475955 PXDNQ92626 1479 aa13.59□□□□□ -0.23
SEMA3C-208ENST00000475955 KIAA1210Q9ULL0 1709 aa13.59□□□□□ -0.23
SEMA3C-208ENST00000475955 NUTM2BA6NNL0 878 aaPredicted RBP13.58□□□□□ -0.24
SEMA3C-208ENST00000475955 NUTM2EB1AL46 878 aaPredicted RBP13.58□□□□□ -0.24
SEMA3C-208ENST00000475955 SAFB2Q14151 953 aaKnown RBP eCLIP13.58□□□□□ -0.24
SEMA3C-208ENST00000475955 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
SEMA3C-208ENST00000475955 NUTM2AQ8IVF1 878 aaPredicted RBP13.58□□□□□ -0.24
SEMA3C-208ENST00000475955 ADGRB2O60241 1585 aa13.58□□□□□ -0.24
SEMA3C-208ENST00000475955 COL22A1Q8NFW1 1626 aaPredicted RBP13.57□□□□□ -0.24
SEMA3C-208ENST00000475955 TRAK1Q9UPV9 953 aa13.57□□□□□ -0.24
SEMA3C-208ENST00000475955 KIF1AQ12756 1690 aa13.56□□□□□ -0.24
SEMA3C-208ENST00000475955 FOXO3O43524 673 aa13.56□□□□□ -0.24
SEMA3C-208ENST00000475955 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
SEMA3C-208ENST00000475955 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
SEMA3C-208ENST00000475955 SIN3AQ96ST3 1273 aa13.55□□□□□ -0.24
SEMA3C-208ENST00000475955 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
SEMA3C-208ENST00000475955 MARF1Q9Y4F3 1742 aaKnown RBP13.55□□□□□ -0.24
SEMA3C-208ENST00000475955 NBPF1Q3BBV0 1214 aa13.53□□□□□ -0.24
SEMA3C-208ENST00000475955 MEX3CQ5U5Q3 659 aaKnown RBP13.53□□□□□ -0.24
SEMA3C-208ENST00000475955 YTHDC1Q96MU7 727 aaKnown RBP13.53□□□□□ -0.24
SEMA3C-208ENST00000475955 HIRIP3Q9BW71 556 aaPredicted RBP13.53□□□□□ -0.24
SEMA3C-208ENST00000475955 POGKQ9P215 609 aa13.53□□□□□ -0.24
SEMA3C-208ENST00000475955 NPHP3Q7Z494 1330 aa13.53□□□□□ -0.24
SEMA3C-208ENST00000475955 MINK1Q8N4C8 1332 aaPredicted RBP13.52□□□□□ -0.25
SEMA3C-208ENST00000475955 PRR36Q9H6K5 1346 aa13.51□□□□□ -0.25
SEMA3C-208ENST00000475955 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
SEMA3C-208ENST00000475955 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
SEMA3C-208ENST00000475955 AFF2P51816 1311 aa13.5□□□□□ -0.25
SEMA3C-208ENST00000475955 PHF8Q9UPP1 1060 aa13.5□□□□□ -0.25
SEMA3C-208ENST00000475955 TRPM1Q7Z4N2 1603 aa13.5□□□□□ -0.25
SEMA3C-208ENST00000475955 ANKARQ7Z5J8 1434 aa13.49□□□□□ -0.25
SEMA3C-208ENST00000475955 ADAMTS2O95450 1211 aa13.49□□□□□ -0.25
SEMA3C-208ENST00000475955 C8orf37Q96NL8 207 aa13.49□□□□□ -0.25
SEMA3C-208ENST00000475955 ABCA3Q99758 1704 aa13.49□□□□□ -0.25
SEMA3C-208ENST00000475955 TULP4Q9NRJ4 1543 aa13.49□□□□□ -0.25
SEMA3C-208ENST00000475955 SPATA31A3Q5VYP0 1347 aa13.48□□□□□ -0.25
SEMA3C-208ENST00000475955 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
SEMA3C-208ENST00000475955 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
SEMA3C-208ENST00000475955 ITSN1Q15811 1721 aa13.47□□□□□ -0.25
SEMA3C-208ENST00000475955 WASLO00401 505 aaPredicted RBP13.47□□□□□ -0.25
SEMA3C-208ENST00000475955 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
SEMA3C-208ENST00000475955 TOPAZ1Q8N9V7 1692 aa13.47□□□□□ -0.25
SEMA3C-208ENST00000475955 ALS2Q96Q42 1657 aa13.47□□□□□ -0.25
SEMA3C-208ENST00000475955 QRICH2Q9H0J4 1663 aa13.46□□□□□ -0.26
SEMA3C-208ENST00000475955 ATP7BP35670 1465 aa13.45□□□□□ -0.26
SEMA3C-208ENST00000475955 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
SEMA3C-208ENST00000475955 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
SEMA3C-208ENST00000475955 TNS3Q68CZ2 1445 aa13.44□□□□□ -0.26
SEMA3C-208ENST00000475955 FNBP4Q8N3X1 1017 aaPredicted RBP13.43□□□□□ -0.26
SEMA3C-208ENST00000475955 QTRT2Q9H974 415 aaKnown RBP13.43□□□□□ -0.26
SEMA3C-208ENST00000475955 SBNO1A3KN83 1393 aa13.43□□□□□ -0.26
SEMA3C-208ENST00000475955 RXRBP28702 533 aa13.42□□□□□ -0.26
SEMA3C-208ENST00000475955 PSME1Q06323 249 aa13.42□□□□□ -0.26
SEMA3C-208ENST00000475955 NBPF8Q3BBV2 869 aa13.42□□□□□ -0.26
SEMA3C-208ENST00000475955 CABLES1Q8TDN4 633 aa13.42□□□□□ -0.26
SEMA3C-208ENST00000475955 NUDT16Q96DE0 195 aaKnown RBP13.42□□□□□ -0.26
SEMA3C-208ENST00000475955 CDK19Q9BWU1 502 aa13.42□□□□□ -0.26
SEMA3C-208ENST00000475955 BCL9LQ86UU0 1499 aa13.42□□□□□ -0.26
SEMA3C-208ENST00000475955 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
SEMA3C-208ENST00000475955 EIF3AQ14152 1382 aaKnown RBP13.41□□□□□ -0.26
SEMA3C-208ENST00000475955 CDK12Q9NYV4 1490 aaPredicted RBP13.41□□□□□ -0.26
SEMA3C-208ENST00000475955 PLCH1Q4KWH8 1693 aa13.4□□□□□ -0.26
SEMA3C-208ENST00000475955 RGS12O14924 1447 aa13.4□□□□□ -0.26
SEMA3C-208ENST00000475955 USP21Q9UK80 565 aa13.4□□□□□ -0.26
SEMA3C-208ENST00000475955 ATRNO75882 1429 aa13.39□□□□□ -0.27
SEMA3C-208ENST00000475955 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
SEMA3C-208ENST00000475955 SLIT2O94813 1529 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms