RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 MARF1Q9Y4F3 1742 aaKnown RBP22.51■■□□□ 1.19
CSNK2B-207ENST00000475875 UNC5CLQ8IV45 518 aa22.5■■□□□ 1.19
CSNK2B-207ENST00000475875 ZNF326Q5BKZ1 582 aaKnown RBP22.49■■□□□ 1.19
CSNK2B-207ENST00000475875 GLI3P10071 1580 aa22.48■■□□□ 1.19
CSNK2B-207ENST00000475875 SLIT2O94813 1529 aa22.47■■□□□ 1.19
CSNK2B-207ENST00000475875 PXDNQ92626 1479 aa22.47■■□□□ 1.19
CSNK2B-207ENST00000475875 HRCP23327 699 aa22.46■■□□□ 1.19
CSNK2B-207ENST00000475875 FAM50AQ14320 339 aaKnown RBP22.46■■□□□ 1.19
CSNK2B-207ENST00000475875 ROBO2Q9HCK4 1378 aa22.46■■□□□ 1.19
CSNK2B-207ENST00000475875 NUP155O75694 1391 aa22.45■■□□□ 1.18
CSNK2B-207ENST00000475875 HFM1A2PYH4 1435 aa22.45■■□□□ 1.18
CSNK2B-207ENST00000475875 LRPPRCP42704 1394 aaKnown RBP22.44■■□□□ 1.18
CSNK2B-207ENST00000475875 ROCK1Q13464 1354 aa22.44■■□□□ 1.18
CSNK2B-207ENST00000475875 NEXMIFQ5QGS0 1516 aa22.43■■□□□ 1.18
CSNK2B-207ENST00000475875 SEPT12Q8IYM1 358 aa22.42■■□□□ 1.18
CSNK2B-207ENST00000475875 ONECUT3O60422 494 aaPredicted RBP22.41■■□□□ 1.18
CSNK2B-207ENST00000475875 BAG6P46379 1132 aa22.41■■□□□ 1.18
CSNK2B-207ENST00000475875 ESCO1Q5FWF5 840 aa22.41■■□□□ 1.18
CSNK2B-207ENST00000475875 CDC42BPGQ6DT37 1551 aa22.39■■□□□ 1.18
CSNK2B-207ENST00000475875 BRWD3Q6RI45 1802 aa22.39■■□□□ 1.17
CSNK2B-207ENST00000475875 PSDA5PKW4 1024 aaPredicted RBP22.38■■□□□ 1.17
CSNK2B-207ENST00000475875 VPS72Q15906 364 aa22.38■■□□□ 1.17
CSNK2B-207ENST00000475875 KRT27Q7Z3Y8 459 aa22.38■■□□□ 1.17
CSNK2B-207ENST00000475875 FOXO3O43524 673 aa22.37■■□□□ 1.17
CSNK2B-207ENST00000475875 VGFO15240 615 aaPredicted RBP22.35■■□□□ 1.17
CSNK2B-207ENST00000475875 USP32Q8NFA0 1604 aa22.33■■□□□ 1.17
CSNK2B-207ENST00000475875 SPATA31A3Q5VYP0 1347 aa22.32■■□□□ 1.16
CSNK2B-207ENST00000475875 XPCQ01831 940 aaPredicted RBP22.32■■□□□ 1.16
CSNK2B-207ENST00000475875 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
CSNK2B-207ENST00000475875 CCDC144AA2RUR9 1427 aa22.3■■□□□ 1.16
CSNK2B-207ENST00000475875 YY1P25490 414 aa22.29■■□□□ 1.16
CSNK2B-207ENST00000475875 CLTCL1P53675 1640 aa22.28■■□□□ 1.16
CSNK2B-207ENST00000475875 NWD2Q9ULI1 1742 aa22.28■■□□□ 1.16
CSNK2B-207ENST00000475875 DISP2A7MBM2 1401 aa22.27■■□□□ 1.16
CSNK2B-207ENST00000475875 RPGRIP1LQ68CZ1 1315 aa22.26■■□□□ 1.15
CSNK2B-207ENST00000475875 NAIPQ13075 1403 aa22.25■■□□□ 1.15
CSNK2B-207ENST00000475875 R3HDM1Q15032 1099 aaKnown RBP22.25■■□□□ 1.15
CSNK2B-207ENST00000475875 CCDC9Q9Y3X0 531 aaKnown RBP22.25■■□□□ 1.15
CSNK2B-207ENST00000475875 KIF1BO60333 1816 aa22.23■■□□□ 1.15
CSNK2B-207ENST00000475875 HAP1P54257 671 aaPredicted RBP22.23■■□□□ 1.15
CSNK2B-207ENST00000475875 EN1Q05925 392 aaPredicted RBP22.23■■□□□ 1.15
CSNK2B-207ENST00000475875 KIF1AQ12756 1690 aa22.23■■□□□ 1.15
CSNK2B-207ENST00000475875 RGPD1P0DJD0 1748 aa22.22■■□□□ 1.15
CSNK2B-207ENST00000475875 TNS3Q68CZ2 1445 aa22.21■■□□□ 1.15
CSNK2B-207ENST00000475875 PLCH1Q4KWH8 1693 aa22.2■■□□□ 1.15
CSNK2B-207ENST00000475875 KRT28Q7Z3Y7 464 aa22.2■■□□□ 1.14
CSNK2B-207ENST00000475875 TECPR2O15040 1411 aa22.2■■□□□ 1.14
CSNK2B-207ENST00000475875 A0A0G2JS52 829 aa22.19■■□□□ 1.14
CSNK2B-207ENST00000475875 MYT1Q01538 1121 aa22.19■■□□□ 1.14
CSNK2B-207ENST00000475875 PSME1Q06323 249 aa22.18■■□□□ 1.14
CSNK2B-207ENST00000475875 ARHGEF10O15013 1369 aa22.16■■□□□ 1.14
CSNK2B-207ENST00000475875 SBNO1A3KN83 1393 aa22.15■■□□□ 1.14
CSNK2B-207ENST00000475875 PARD3Q8TEW0 1356 aa22.15■■□□□ 1.14
CSNK2B-207ENST00000475875 NUTM2FA1L443 756 aa22.15■■□□□ 1.14
CSNK2B-207ENST00000475875 FAM98CQ17RN3 349 aaKnown RBP22.15■■□□□ 1.14
CSNK2B-207ENST00000475875 CABLES1Q8TDN4 633 aa22.13■■□□□ 1.13
CSNK2B-207ENST00000475875 FMN2Q9NZ56 1722 aa22.13■■□□□ 1.13
CSNK2B-207ENST00000475875 ABCC11Q96J66 1382 aa22.12■■□□□ 1.13
CSNK2B-207ENST00000475875 ADGRB2O60241 1585 aa22.12■■□□□ 1.13
CSNK2B-207ENST00000475875 FAM83GA6ND36 823 aa22.12■■□□□ 1.13
CSNK2B-207ENST00000475875 DCAF8L1A6NGE4 600 aa22.11■■□□□ 1.13
CSNK2B-207ENST00000475875 EZH2Q15910 746 aaKnown RBP22.11■■□□□ 1.13
CSNK2B-207ENST00000475875 WAPLQ7Z5K2 1190 aa22.11■■□□□ 1.13
CSNK2B-207ENST00000475875 NRAPQ86VF7 1730 aa22.1■■□□□ 1.13
CSNK2B-207ENST00000475875 CAMKK2Q96RR4 588 aa22.1■■□□□ 1.13
CSNK2B-207ENST00000475875 ABCA3Q99758 1704 aa22.1■■□□□ 1.13
CSNK2B-207ENST00000475875 TNS1Q9HBL0 1735 aaKnown RBP22.1■■□□□ 1.13
CSNK2B-207ENST00000475875 PHF8Q9UPP1 1060 aa22.1■■□□□ 1.13
CSNK2B-207ENST00000475875 PPLO60437 1756 aa22.1■■□□□ 1.13
CSNK2B-207ENST00000475875 BTG4Q9NY30 223 aa22.07■■□□□ 1.12
CSNK2B-207ENST00000475875 NRXN1Q9ULB1 1477 aa22.07■■□□□ 1.12
CSNK2B-207ENST00000475875 SPATA31A5Q5VU36 1347 aa22.06■■□□□ 1.12
CSNK2B-207ENST00000475875 SPATA31A7Q8IWB4 1347 aa22.06■■□□□ 1.12
CSNK2B-207ENST00000475875 KNDC1Q76NI1 1749 aa22.06■■□□□ 1.12
CSNK2B-207ENST00000475875 STK26Q9P289 416 aa22.06■■□□□ 1.12
CSNK2B-207ENST00000475875 NINLQ9Y2I6 1382 aa22.06■■□□□ 1.12
CSNK2B-207ENST00000475875 THSD7AQ9UPZ6 1657 aa22.05■■□□□ 1.12
CSNK2B-207ENST00000475875 PLEKHH1Q9ULM0 1364 aa22.05■■□□□ 1.12
CSNK2B-207ENST00000475875 SIRT1Q96EB6 747 aa22.05■■□□□ 1.12
CSNK2B-207ENST00000475875 FAM182BQ5T319 152 aa22.04■■□□□ 1.12
CSNK2B-207ENST00000475875 LMOD2Q6P5Q4 547 aa22.04■■□□□ 1.12
CSNK2B-207ENST00000475875 FAM196AQ6ZSG2 479 aa22.04■■□□□ 1.12
CSNK2B-207ENST00000475875 RRBP1Q9P2E9 1410 aaKnown RBP22.04■■□□□ 1.12
CSNK2B-207ENST00000475875 COL14A1Q05707 1796 aaKnown RBP22.02■■□□□ 1.12
CSNK2B-207ENST00000475875 ITGAEP38570 1179 aa22.02■■□□□ 1.12
CSNK2B-207ENST00000475875 NBPF8Q3BBV2 869 aa22.02■■□□□ 1.12
CSNK2B-207ENST00000475875 NBPF14Q5TI25 921 aa22.02■■□□□ 1.12
CSNK2B-207ENST00000475875 SPON1Q9HCB6 807 aa22.01■■□□□ 1.11
CSNK2B-207ENST00000475875 ADGRF5Q8IZF2 1346 aa22.01■■□□□ 1.11
CSNK2B-207ENST00000475875 TRIM37O94972 964 aa22■■□□□ 1.11
CSNK2B-207ENST00000475875 PPP1R1BQ9UD71 204 aaPredicted RBP22■■□□□ 1.11
CSNK2B-207ENST00000475875 PLEKHG5O94827 1062 aa21.99■■□□□ 1.11
CSNK2B-207ENST00000475875 APBA3O96018 575 aa21.99■■□□□ 1.11
CSNK2B-207ENST00000475875 ANKRD30BQ9BXX2 1392 aa21.98■■□□□ 1.11
CSNK2B-207ENST00000475875 RREB1Q92766 1687 aa21.98■■□□□ 1.11
CSNK2B-207ENST00000475875 YTHDC2Q9H6S0 1430 aaKnown RBP21.97■■□□□ 1.11
CSNK2B-207ENST00000475875 KCNQ2O43526 872 aa21.96■■□□□ 1.11
CSNK2B-207ENST00000475875 IFT172Q9UG01 1749 aa21.96■■□□□ 1.11
CSNK2B-207ENST00000475875 ANKARQ7Z5J8 1434 aa21.96■■□□□ 1.11
CSNK2B-207ENST00000475875 IFFO2Q5TF58 517 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms