RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 CENPJQ9HC77 1338 aaPredicted RBP16.91■□□□□ 0.3
MRPL55-227ENST00000475832 METP08581 1390 aa16.9■□□□□ 0.3
MRPL55-227ENST00000475832 TMEM94Q12767 1356 aa16.9■□□□□ 0.3
MRPL55-227ENST00000475832 FAM135BQ49AJ0 1406 aa16.9■□□□□ 0.3
MRPL55-227ENST00000475832 PTPRUQ92729 1446 aa16.9■□□□□ 0.3
MRPL55-227ENST00000475832 ADGRB1O14514 1584 aa16.89■□□□□ 0.3
MRPL55-227ENST00000475832 NCOA3Q9Y6Q9 1424 aa16.89■□□□□ 0.29
MRPL55-227ENST00000475832 C11orf95C9JLR9 678 aaPredicted RBP16.89■□□□□ 0.29
MRPL55-227ENST00000475832 PROSER2Q86WR7 435 aaPredicted RBP16.89■□□□□ 0.29
MRPL55-227ENST00000475832 TESK2Q96S53 571 aa16.89■□□□□ 0.29
MRPL55-227ENST00000475832 ANP32CO43423 234 aa16.88■□□□□ 0.29
MRPL55-227ENST00000475832 XRN1Q8IZH2 1706 aaKnown RBP16.87■□□□□ 0.29
MRPL55-227ENST00000475832 STK26Q9P289 416 aa16.87■□□□□ 0.29
MRPL55-227ENST00000475832 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
MRPL55-227ENST00000475832 SBNO2Q9Y2G9 1366 aa16.87■□□□□ 0.29
MRPL55-227ENST00000475832 POGKQ9P215 609 aa16.86■□□□□ 0.29
MRPL55-227ENST00000475832 YTHDC2Q9H6S0 1430 aaKnown RBP16.86■□□□□ 0.29
MRPL55-227ENST00000475832 RBM33Q96EV2 1170 aaKnown RBP16.84■□□□□ 0.29
MRPL55-227ENST00000475832 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
MRPL55-227ENST00000475832 MIER1Q8N108 512 aa16.83■□□□□ 0.28
MRPL55-227ENST00000475832 ZNF772Q68DY9 489 aaPredicted RBP16.82■□□□□ 0.28
MRPL55-227ENST00000475832 MSH6P52701 1360 aa16.81■□□□□ 0.28
MRPL55-227ENST00000475832 ABCC11Q96J66 1382 aa16.81■□□□□ 0.28
MRPL55-227ENST00000475832 MEX3CQ5U5Q3 659 aaKnown RBP16.81■□□□□ 0.28
MRPL55-227ENST00000475832 SRCAPQ6ZRS2 3230 aa16.81■□□□□ 0.28
MRPL55-227ENST00000475832 PTCH1Q13635 1447 aa16.8■□□□□ 0.28
MRPL55-227ENST00000475832 EVC2Q86UK5 1308 aa16.8■□□□□ 0.28
MRPL55-227ENST00000475832 SIRT1Q96EB6 747 aa16.8■□□□□ 0.28
MRPL55-227ENST00000475832 ASXL1Q8IXJ9 1541 aa16.8■□□□□ 0.28
MRPL55-227ENST00000475832 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
MRPL55-227ENST00000475832 PRAM1Q96QH2 718 aa16.79■□□□□ 0.28
MRPL55-227ENST00000475832 DLC1Q96QB1 1528 aa16.79■□□□□ 0.28
MRPL55-227ENST00000475832 JCADQ9P266 1359 aa16.78■□□□□ 0.28
MRPL55-227ENST00000475832 C19orf44Q9H6X5 657 aa16.78■□□□□ 0.28
MRPL55-227ENST00000475832 RXRBP28702 533 aa16.77■□□□□ 0.28
MRPL55-227ENST00000475832 TECPR2O15040 1411 aa16.77■□□□□ 0.27
MRPL55-227ENST00000475832 DCCP43146 1447 aa16.77■□□□□ 0.27
MRPL55-227ENST00000475832 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.27
MRPL55-227ENST00000475832 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.76■□□□□ 0.27
MRPL55-227ENST00000475832 QRICH2Q9H0J4 1663 aa16.75■□□□□ 0.27
MRPL55-227ENST00000475832 SAFB2Q14151 953 aaKnown RBP eCLIP16.75■□□□□ 0.27
MRPL55-227ENST00000475832 ARHGEF28Q8N1W1 1705 aaKnown RBP16.75■□□□□ 0.27
MRPL55-227ENST00000475832 ROBO1Q9Y6N7 1651 aa16.75■□□□□ 0.27
MRPL55-227ENST00000475832 CADPS2Q86UW7 1296 aa16.74■□□□□ 0.27
MRPL55-227ENST00000475832 SLAIN2Q9P270 581 aa16.74■□□□□ 0.27
MRPL55-227ENST00000475832 ADGRL3Q9HAR2 1447 aa16.73■□□□□ 0.27
MRPL55-227ENST00000475832 MINK1Q8N4C8 1332 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-227ENST00000475832 CCER2I3L3R5 266 aa16.72■□□□□ 0.27
MRPL55-227ENST00000475832 SRPK2P78362 688 aaKnown RBP16.72■□□□□ 0.27
MRPL55-227ENST00000475832 C14orf37Q86TY3 774 aa16.72■□□□□ 0.27
MRPL55-227ENST00000475832 KNDC1Q76NI1 1749 aa16.71■□□□□ 0.27
MRPL55-227ENST00000475832 ATF3P18847 181 aa16.71■□□□□ 0.27
MRPL55-227ENST00000475832 PANK3Q9H999 370 aa16.71■□□□□ 0.27
MRPL55-227ENST00000475832 NALCNQ8IZF0 1738 aa16.7■□□□□ 0.26
MRPL55-227ENST00000475832 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
MRPL55-227ENST00000475832 ATAD2Q6PL18 1390 aa16.69■□□□□ 0.26
MRPL55-227ENST00000475832 KTN1Q86UP2 1357 aaKnown RBP16.69■□□□□ 0.26
MRPL55-227ENST00000475832 NINLQ9Y2I6 1382 aa16.69■□□□□ 0.26
MRPL55-227ENST00000475832 WAPLQ7Z5K2 1190 aa16.69■□□□□ 0.26
MRPL55-227ENST00000475832 TMC1Q8TDI8 760 aa16.69■□□□□ 0.26
MRPL55-227ENST00000475832 KNSTRNQ9Y448 316 aa16.69■□□□□ 0.26
MRPL55-227ENST00000475832 PRKRIP1Q9H875 184 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-227ENST00000475832 MST1RQ04912 1400 aa16.67■□□□□ 0.26
MRPL55-227ENST00000475832 PHLPP1O60346 1717 aa16.67■□□□□ 0.26
MRPL55-227ENST00000475832 RALBP1Q15311 655 aa16.66■□□□□ 0.26
MRPL55-227ENST00000475832 CDK19Q9BWU1 502 aa16.66■□□□□ 0.26
MRPL55-227ENST00000475832 CABP2Q9NPB3 220 aa16.66■□□□□ 0.26
MRPL55-227ENST00000475832 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
MRPL55-227ENST00000475832 TULP4Q9NRJ4 1543 aa16.65■□□□□ 0.26
MRPL55-227ENST00000475832 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.26
MRPL55-227ENST00000475832 WASLO00401 505 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-227ENST00000475832 CDK12Q9NYV4 1490 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-227ENST00000475832 CDC42BPGQ6DT37 1551 aa16.64■□□□□ 0.25
MRPL55-227ENST00000475832 LRP6O75581 1613 aa16.63■□□□□ 0.25
MRPL55-227ENST00000475832 BRINP3Q76B58 766 aa16.63■□□□□ 0.25
MRPL55-227ENST00000475832 TERF2IPQ9NYB0 399 aa16.63■□□□□ 0.25
MRPL55-227ENST00000475832 NUTM2BA6NNL0 878 aaPredicted RBP16.62■□□□□ 0.25
MRPL55-227ENST00000475832 NUTM2EB1AL46 878 aaPredicted RBP16.62■□□□□ 0.25
MRPL55-227ENST00000475832 PER1O15534 1290 aaPredicted RBP16.62■□□□□ 0.25
MRPL55-227ENST00000475832 NUTM2AQ8IVF1 878 aaPredicted RBP16.62■□□□□ 0.25
MRPL55-227ENST00000475832 C1orf167Q5SNV9 1468 aa16.61■□□□□ 0.25
MRPL55-227ENST00000475832 AHDC1Q5TGY3 1603 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-227ENST00000475832 HDGFL2Q7Z4V5 671 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-227ENST00000475832 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
MRPL55-227ENST00000475832 SLC12A5Q9H2X9 1139 aa16.6■□□□□ 0.25
MRPL55-227ENST00000475832 ANKRD36BQ8N2N9 1353 aa16.6■□□□□ 0.25
MRPL55-227ENST00000475832 NPC1L1Q9UHC9 1359 aa16.58■□□□□ 0.24
MRPL55-227ENST00000475832 COL16A1Q07092 1604 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-227ENST00000475832 MYOM1P52179 1685 aa16.58■□□□□ 0.24
MRPL55-227ENST00000475832 MYBBP1AQ9BQG0 1328 aaKnown RBP16.57■□□□□ 0.24
MRPL55-227ENST00000475832 CC2D1BQ5T0F9 858 aaKnown RBP16.57■□□□□ 0.24
MRPL55-227ENST00000475832 ADGRB2O60241 1585 aa16.56■□□□□ 0.24
MRPL55-227ENST00000475832 AFF2P51816 1311 aa16.56■□□□□ 0.24
MRPL55-227ENST00000475832 NUDT16Q96DE0 195 aaKnown RBP16.56■□□□□ 0.24
MRPL55-227ENST00000475832 CCDC61Q9Y6R9 512 aa16.56■□□□□ 0.24
MRPL55-227ENST00000475832 NHSL1Q5SYE7 1610 aa16.56■□□□□ 0.24
MRPL55-227ENST00000475832 CGNL1Q0VF96 1302 aa16.55■□□□□ 0.24
MRPL55-227ENST00000475832 RBM6P78332 1123 aaKnown RBP16.55■□□□□ 0.24
MRPL55-227ENST00000475832 MRS2Q9HD23 443 aa16.55■□□□□ 0.24
MRPL55-227ENST00000475832 NSD3Q9BZ95 1437 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms