RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 NEXMIFQ5QGS0 1516 aa21.44■■□□□ 1.02
FAM3A-218ENST00000475657 HFM1A2PYH4 1435 aa21.41■■□□□ 1.02
FAM3A-218ENST00000475657 UNC5CLQ8IV45 518 aa21.41■■□□□ 1.02
FAM3A-218ENST00000475657 SPHKAPQ2M3C7 1700 aa21.41■■□□□ 1.02
FAM3A-218ENST00000475657 VGFO15240 615 aaPredicted RBP21.4■■□□□ 1.02
FAM3A-218ENST00000475657 PXDNQ92626 1479 aa21.39■■□□□ 1.02
FAM3A-218ENST00000475657 DEFB132Q7Z7B7 95 aa21.39■■□□□ 1.01
FAM3A-218ENST00000475657 LRP5O75197 1615 aa21.39■■□□□ 1.01
FAM3A-218ENST00000475657 SF3B2Q13435 895 aaKnown RBP21.38■■□□□ 1.01
FAM3A-218ENST00000475657 ESCO1Q5FWF5 840 aa21.38■■□□□ 1.01
FAM3A-218ENST00000475657 RALGAPBQ86X10 1494 aa21.38■■□□□ 1.01
FAM3A-218ENST00000475657 LRPPRCP42704 1394 aaKnown RBP21.37■■□□□ 1.01
FAM3A-218ENST00000475657 SLIT2O94813 1529 aa21.37■■□□□ 1.01
FAM3A-218ENST00000475657 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.37■■□□□ 1.01
FAM3A-218ENST00000475657 MARF1Q9Y4F3 1742 aaKnown RBP21.37■■□□□ 1.01
FAM3A-218ENST00000475657 FOXO3O43524 673 aa21.36■■□□□ 1.01
FAM3A-218ENST00000475657 GLI3P10071 1580 aa21.35■■□□□ 1.01
FAM3A-218ENST00000475657 CDC42BPGQ6DT37 1551 aa21.33■■□□□ 1.01
FAM3A-218ENST00000475657 ONECUT3O60422 494 aaPredicted RBP21.33■■□□□ 1.01
FAM3A-218ENST00000475657 RPGRIP1LQ68CZ1 1315 aa21.32■■□□□ 1
FAM3A-218ENST00000475657 SEPT12Q8IYM1 358 aa21.32■■□□□ 1
FAM3A-218ENST00000475657 CLTCL1P53675 1640 aa21.32■■□□□ 1
FAM3A-218ENST00000475657 XPCQ01831 940 aaPredicted RBP21.3■■□□□ 1
FAM3A-218ENST00000475657 SPATA31A3Q5VYP0 1347 aa21.29■■□□□ 1
FAM3A-218ENST00000475657 VPS72Q15906 364 aa21.29■■□□□ 1
FAM3A-218ENST00000475657 HRCP23327 699 aa21.28■■□□□ 1
FAM3A-218ENST00000475657 KRT27Q7Z3Y8 459 aa21.27■■□□□ 1
FAM3A-218ENST00000475657 KIF1BO60333 1816 aa21.26■□□□□ 0.99
FAM3A-218ENST00000475657 BRWD3Q6RI45 1802 aa21.25■□□□□ 0.99
FAM3A-218ENST00000475657 BAG6P46379 1132 aa21.25■□□□□ 0.99
FAM3A-218ENST00000475657 NAIPQ13075 1403 aa21.24■□□□□ 0.99
FAM3A-218ENST00000475657 CCDC144AA2RUR9 1427 aa21.23■□□□□ 0.99
FAM3A-218ENST00000475657 PSDA5PKW4 1024 aaPredicted RBP21.23■□□□□ 0.99
FAM3A-218ENST00000475657 ITGAEP38570 1179 aa21.22■□□□□ 0.99
FAM3A-218ENST00000475657 USP32Q8NFA0 1604 aa21.22■□□□□ 0.99
FAM3A-218ENST00000475657 TECPR2O15040 1411 aa21.21■□□□□ 0.99
FAM3A-218ENST00000475657 KRT28Q7Z3Y7 464 aa21.2■□□□□ 0.98
FAM3A-218ENST00000475657 NUTM2FA1L443 756 aa21.18■□□□□ 0.98
FAM3A-218ENST00000475657 HAP1P54257 671 aaPredicted RBP21.17■□□□□ 0.98
FAM3A-218ENST00000475657 WAPLQ7Z5K2 1190 aa21.17■□□□□ 0.98
FAM3A-218ENST00000475657 CCDC9Q9Y3X0 531 aaKnown RBP21.17■□□□□ 0.98
FAM3A-218ENST00000475657 ABCC11Q96J66 1382 aa21.17■□□□□ 0.98
FAM3A-218ENST00000475657 NWD2Q9ULI1 1742 aa21.16■□□□□ 0.98
FAM3A-218ENST00000475657 PSME1Q06323 249 aa21.16■□□□□ 0.98
FAM3A-218ENST00000475657 KIF1AQ12756 1690 aa21.15■□□□□ 0.98
FAM3A-218ENST00000475657 TNS3Q68CZ2 1445 aa21.15■□□□□ 0.98
FAM3A-218ENST00000475657 SBNO1A3KN83 1393 aa21.13■□□□□ 0.97
FAM3A-218ENST00000475657 CABLES1Q8TDN4 633 aa21.13■□□□□ 0.97
FAM3A-218ENST00000475657 STK26Q9P289 416 aa21.13■□□□□ 0.97
FAM3A-218ENST00000475657 PPLO60437 1756 aa21.13■□□□□ 0.97
FAM3A-218ENST00000475657 FAM83GA6ND36 823 aa21.12■□□□□ 0.97
FAM3A-218ENST00000475657 EN1Q05925 392 aaPredicted RBP21.12■□□□□ 0.97
FAM3A-218ENST00000475657 PPARGC1BQ86YN6 1023 aaKnown RBP21.12■□□□□ 0.97
FAM3A-218ENST00000475657 DISP2A7MBM2 1401 aa21.12■□□□□ 0.97
FAM3A-218ENST00000475657 ARHGEF10O15013 1369 aa21.11■□□□□ 0.97
FAM3A-218ENST00000475657 R3HDM1Q15032 1099 aaKnown RBP21.11■□□□□ 0.97
FAM3A-218ENST00000475657 SIRT1Q96EB6 747 aa21.11■□□□□ 0.97
FAM3A-218ENST00000475657 PHF8Q9UPP1 1060 aa21.11■□□□□ 0.97
FAM3A-218ENST00000475657 ADGRF5Q8IZF2 1346 aa21.1■□□□□ 0.97
FAM3A-218ENST00000475657 FMN2Q9NZ56 1722 aa21.1■□□□□ 0.97
FAM3A-218ENST00000475657 PLEKHH1Q9ULM0 1364 aa21.1■□□□□ 0.97
FAM3A-218ENST00000475657 PLCH1Q4KWH8 1693 aa21.09■□□□□ 0.97
FAM3A-218ENST00000475657 A0A0G2JS52 829 aa21.09■□□□□ 0.97
FAM3A-218ENST00000475657 MYT1Q01538 1121 aa21.09■□□□□ 0.97
FAM3A-218ENST00000475657 FAM98CQ17RN3 349 aaKnown RBP21.09■□□□□ 0.97
FAM3A-218ENST00000475657 RRBP1Q9P2E9 1410 aaKnown RBP21.07■□□□□ 0.96
FAM3A-218ENST00000475657 ANKRD30BQ9BXX2 1392 aa21.06■□□□□ 0.96
FAM3A-218ENST00000475657 NRXN1Q9ULB1 1477 aa21.05■□□□□ 0.96
FAM3A-218ENST00000475657 RGPD1P0DJD0 1748 aa21.04■□□□□ 0.96
FAM3A-218ENST00000475657 KNDC1Q76NI1 1749 aa21.04■□□□□ 0.96
FAM3A-218ENST00000475657 YY1P25490 414 aa21.04■□□□□ 0.96
FAM3A-218ENST00000475657 TMEM132EQ6IEE7 984 aa21.04■□□□□ 0.96
FAM3A-218ENST00000475657 SLC4A1APQ9BWU0 796 aaKnown RBP21.04■□□□□ 0.96
FAM3A-218ENST00000475657 BTG4Q9NY30 223 aa21.04■□□□□ 0.96
FAM3A-218ENST00000475657 LMOD2Q6P5Q4 547 aa21.03■□□□□ 0.96
FAM3A-218ENST00000475657 YTHDC2Q9H6S0 1430 aaKnown RBP21.03■□□□□ 0.96
FAM3A-218ENST00000475657 SPATA31A5Q5VU36 1347 aa21.02■□□□□ 0.95
FAM3A-218ENST00000475657 SPATA31A7Q8IWB4 1347 aa21.02■□□□□ 0.95
FAM3A-218ENST00000475657 ABCA3Q99758 1704 aa21.01■□□□□ 0.95
FAM3A-218ENST00000475657 PARD3Q8TEW0 1356 aa21.01■□□□□ 0.95
FAM3A-218ENST00000475657 CAMKK2Q96RR4 588 aa21.01■□□□□ 0.95
FAM3A-218ENST00000475657 PLEKHG5O94827 1062 aa21■□□□□ 0.95
FAM3A-218ENST00000475657 EZH2Q15910 746 aaKnown RBP21■□□□□ 0.95
FAM3A-218ENST00000475657 NRAPQ86VF7 1730 aa21■□□□□ 0.95
FAM3A-218ENST00000475657 PIK3C2GO75747 1445 aa20.99■□□□□ 0.95
FAM3A-218ENST00000475657 SPATA31E1Q6ZUB1 1445 aa20.99■□□□□ 0.95
FAM3A-218ENST00000475657 FAM182BQ5T319 152 aa20.99■□□□□ 0.95
FAM3A-218ENST00000475657 RGL3Q3MIN7 710 aa20.97■□□□□ 0.95
FAM3A-218ENST00000475657 FAM196AQ6ZSG2 479 aa20.97■□□□□ 0.95
FAM3A-218ENST00000475657 ANKARQ7Z5J8 1434 aa20.95■□□□□ 0.95
FAM3A-218ENST00000475657 TNS1Q9HBL0 1735 aaKnown RBP20.95■□□□□ 0.94
FAM3A-218ENST00000475657 COL14A1Q05707 1796 aaKnown RBP20.95■□□□□ 0.94
FAM3A-218ENST00000475657 C14orf93Q9H972 538 aaKnown RBP20.95■□□□□ 0.94
FAM3A-218ENST00000475657 THSD7AQ9UPZ6 1657 aa20.95■□□□□ 0.94
FAM3A-218ENST00000475657 RGPD8O14715 1765 aaPredicted RBP20.95■□□□□ 0.94
FAM3A-218ENST00000475657 ADGRB2O60241 1585 aa20.94■□□□□ 0.94
FAM3A-218ENST00000475657 IFT172Q9UG01 1749 aa20.94■□□□□ 0.94
FAM3A-218ENST00000475657 TRIM37O94972 964 aa20.92■□□□□ 0.94
FAM3A-218ENST00000475657 PMFBP1Q8TBY8 1022 aa20.92■□□□□ 0.94
FAM3A-218ENST00000475657 DHX57Q6P158 1386 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms