RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 RBM6P78332 1123 aaKnown RBP18.62■□□□□ 0.57
CCDC57-208ENST00000475635 NGLY1Q96IV0 654 aa18.62■□□□□ 0.57
CCDC57-208ENST00000475635 CCDC144AA2RUR9 1427 aa18.62■□□□□ 0.57
CCDC57-208ENST00000475635 KNDC1Q76NI1 1749 aa18.62■□□□□ 0.57
CCDC57-208ENST00000475635 ADGRF5Q8IZF2 1346 aa18.61■□□□□ 0.57
CCDC57-208ENST00000475635 SPATA31E1Q6ZUB1 1445 aa18.59■□□□□ 0.57
CCDC57-208ENST00000475635 RGL3Q3MIN7 710 aa18.58■□□□□ 0.56
CCDC57-208ENST00000475635 ESCO1Q5FWF5 840 aa18.58■□□□□ 0.56
CCDC57-208ENST00000475635 RGPD8O14715 1765 aaPredicted RBP18.58■□□□□ 0.56
CCDC57-208ENST00000475635 STK26Q9P289 416 aa18.57■□□□□ 0.56
CCDC57-208ENST00000475635 PXDNQ92626 1479 aa18.57■□□□□ 0.56
CCDC57-208ENST00000475635 FMN2Q9NZ56 1722 aa18.57■□□□□ 0.56
CCDC57-208ENST00000475635 TECPR2O15040 1411 aa18.57■□□□□ 0.56
CCDC57-208ENST00000475635 ANKRD30BQ9BXX2 1392 aa18.56■□□□□ 0.56
CCDC57-208ENST00000475635 NPHP3Q7Z494 1330 aa18.56■□□□□ 0.56
CCDC57-208ENST00000475635 MPHOSPH9Q99550 1183 aa18.56■□□□□ 0.56
CCDC57-208ENST00000475635 USP21Q9UK80 565 aa18.56■□□□□ 0.56
CCDC57-208ENST00000475635 MYOM2P54296 1465 aa18.55■□□□□ 0.56
CCDC57-208ENST00000475635 WAPLQ7Z5K2 1190 aa18.55■□□□□ 0.56
CCDC57-208ENST00000475635 LRPPRCP42704 1394 aaKnown RBP18.55■□□□□ 0.56
CCDC57-208ENST00000475635 PIK3C2GO75747 1445 aa18.54■□□□□ 0.56
CCDC57-208ENST00000475635 FOXO3O43524 673 aa18.53■□□□□ 0.56
CCDC57-208ENST00000475635 TMEM132EQ6IEE7 984 aa18.53■□□□□ 0.56
CCDC57-208ENST00000475635 FNBP4Q8N3X1 1017 aaPredicted RBP18.53■□□□□ 0.56
CCDC57-208ENST00000475635 TRPC5Q9UL62 973 aaPredicted RBP18.53■□□□□ 0.56
CCDC57-208ENST00000475635 KIF1AQ12756 1690 aa18.53■□□□□ 0.56
CCDC57-208ENST00000475635 NUTM2FA1L443 756 aa18.52■□□□□ 0.56
CCDC57-208ENST00000475635 XPCQ01831 940 aaPredicted RBP18.52■□□□□ 0.56
CCDC57-208ENST00000475635 ABCC11Q96J66 1382 aa18.52■□□□□ 0.55
CCDC57-208ENST00000475635 PLEKHH1Q9ULM0 1364 aa18.52■□□□□ 0.55
CCDC57-208ENST00000475635 EP400Q96L91 3159 aa18.51■□□□□ 0.55
CCDC57-208ENST00000475635 ATRNO75882 1429 aa18.51■□□□□ 0.55
CCDC57-208ENST00000475635 YTHDC2Q9H6S0 1430 aaKnown RBP18.5■□□□□ 0.55
CCDC57-208ENST00000475635 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.5■□□□□ 0.55
CCDC57-208ENST00000475635 ATAD2Q6PL18 1390 aa18.49■□□□□ 0.55
CCDC57-208ENST00000475635 BCL9LQ86UU0 1499 aa18.47■□□□□ 0.55
CCDC57-208ENST00000475635 NRXN1Q9ULB1 1477 aa18.45■□□□□ 0.54
CCDC57-208ENST00000475635 C14orf93Q9H972 538 aaKnown RBP18.44■□□□□ 0.54
CCDC57-208ENST00000475635 USP32Q8NFA0 1604 aa18.44■□□□□ 0.54
CCDC57-208ENST00000475635 BRWD3Q6RI45 1802 aa18.44■□□□□ 0.54
CCDC57-208ENST00000475635 SIRT1Q96EB6 747 aa18.43■□□□□ 0.54
CCDC57-208ENST00000475635 SPATA31A3Q5VYP0 1347 aa18.43■□□□□ 0.54
CCDC57-208ENST00000475635 ABCA3Q99758 1704 aa18.42■□□□□ 0.54
CCDC57-208ENST00000475635 ACIN1Q9UKV3 1341 aaKnown RBP18.42■□□□□ 0.54
CCDC57-208ENST00000475635 SRCAPQ6ZRS2 3230 aa18.42■□□□□ 0.54
CCDC57-208ENST00000475635 CFAP70Q5T0N1 1121 aa18.41■□□□□ 0.54
CCDC57-208ENST00000475635 GJD4Q96KN9 370 aaPredicted RBP18.41■□□□□ 0.54
CCDC57-208ENST00000475635 DHX57Q6P158 1386 aaKnown RBP18.41■□□□□ 0.54
CCDC57-208ENST00000475635 SLIT2O94813 1529 aa18.4■□□□□ 0.54
CCDC57-208ENST00000475635 GLI3P10071 1580 aa18.4■□□□□ 0.54
CCDC57-208ENST00000475635 KRT28Q7Z3Y7 464 aa18.4■□□□□ 0.54
CCDC57-208ENST00000475635 PLCH1Q4KWH8 1693 aa18.4■□□□□ 0.54
CCDC57-208ENST00000475635 NWD2Q9ULI1 1742 aa18.39■□□□□ 0.53
CCDC57-208ENST00000475635 UNC5CLQ8IV45 518 aa18.38■□□□□ 0.53
CCDC57-208ENST00000475635 PRAM1Q96QH2 718 aa18.38■□□□□ 0.53
CCDC57-208ENST00000475635 PHF8Q9UPP1 1060 aa18.38■□□□□ 0.53
CCDC57-208ENST00000475635 TNS3Q68CZ2 1445 aa18.38■□□□□ 0.53
CCDC57-208ENST00000475635 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
CCDC57-208ENST00000475635 RALGAPBQ86X10 1494 aa18.37■□□□□ 0.53
CCDC57-208ENST00000475635 DLC1Q96QB1 1528 aa18.37■□□□□ 0.53
CCDC57-208ENST00000475635 ADGRB2O60241 1585 aa18.36■□□□□ 0.53
CCDC57-208ENST00000475635 PSME1Q06323 249 aa18.36■□□□□ 0.53
CCDC57-208ENST00000475635 RAB3GAP2Q9H2M9 1393 aa18.35■□□□□ 0.53
CCDC57-208ENST00000475635 HAP1P54257 671 aaPredicted RBP18.35■□□□□ 0.53
CCDC57-208ENST00000475635 ADGRB1O14514 1584 aa18.34■□□□□ 0.53
CCDC57-208ENST00000475635 CABLES1Q8TDN4 633 aa18.34■□□□□ 0.53
CCDC57-208ENST00000475635 POGKQ9P215 609 aa18.34■□□□□ 0.53
CCDC57-208ENST00000475635 TRPM3Q9HCF6 1732 aaPredicted RBP18.34■□□□□ 0.53
CCDC57-208ENST00000475635 SBNO1A3KN83 1393 aa18.33■□□□□ 0.53
CCDC57-208ENST00000475635 PLEKHG5O94827 1062 aa18.33■□□□□ 0.52
CCDC57-208ENST00000475635 CCDC125Q86Z20 511 aa18.33■□□□□ 0.52
CCDC57-208ENST00000475635 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
CCDC57-208ENST00000475635 LMOD2Q6P5Q4 547 aa18.32■□□□□ 0.52
CCDC57-208ENST00000475635 ARHGEF10O15013 1369 aa18.31■□□□□ 0.52
CCDC57-208ENST00000475635 ALS2Q96Q42 1657 aa18.31■□□□□ 0.52
CCDC57-208ENST00000475635 PMFBP1Q8TBY8 1022 aa18.3■□□□□ 0.52
CCDC57-208ENST00000475635 ZRANB1Q9UGI0 708 aa18.3■□□□□ 0.52
CCDC57-208ENST00000475635 NRAPQ86VF7 1730 aa18.29■□□□□ 0.52
CCDC57-208ENST00000475635 TRAK1Q9UPV9 953 aa18.29■□□□□ 0.52
CCDC57-208ENST00000475635 VPS72Q15906 364 aa18.28■□□□□ 0.52
CCDC57-208ENST00000475635 HIRIP3Q9BW71 556 aaPredicted RBP18.28■□□□□ 0.52
CCDC57-208ENST00000475635 ARHGEF28Q8N1W1 1705 aaKnown RBP18.28■□□□□ 0.52
CCDC57-208ENST00000475635 ITSN1Q15811 1721 aa18.27■□□□□ 0.52
CCDC57-208ENST00000475635 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.52
CCDC57-208ENST00000475635 SEPT12Q8IYM1 358 aa18.27■□□□□ 0.52
CCDC57-208ENST00000475635 KDM2AQ9Y2K7 1162 aa18.27■□□□□ 0.52
CCDC57-208ENST00000475635 TULP4Q9NRJ4 1543 aa18.27■□□□□ 0.51
CCDC57-208ENST00000475635 CRYBG1Q9Y4K1 1723 aa18.26■□□□□ 0.51
CCDC57-208ENST00000475635 MINK1Q8N4C8 1332 aaPredicted RBP18.26■□□□□ 0.51
CCDC57-208ENST00000475635 CCDC9Q9Y3X0 531 aaKnown RBP18.26■□□□□ 0.51
CCDC57-208ENST00000475635 COL14A1Q05707 1796 aaKnown RBP18.26■□□□□ 0.51
CCDC57-208ENST00000475635 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
CCDC57-208ENST00000475635 DCAF11Q8TEB1 546 aa18.25■□□□□ 0.51
CCDC57-208ENST00000475635 EIF3AQ14152 1382 aaKnown RBP18.25■□□□□ 0.51
CCDC57-208ENST00000475635 GPRASP1Q5JY77 1395 aa18.24■□□□□ 0.51
CCDC57-208ENST00000475635 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
CCDC57-208ENST00000475635 ONECUT3O60422 494 aaPredicted RBP18.23■□□□□ 0.51
CCDC57-208ENST00000475635 WASLO00401 505 aaPredicted RBP18.21■□□□□ 0.51
CCDC57-208ENST00000475635 DEFB132Q7Z7B7 95 aa18.21■□□□□ 0.51
CCDC57-208ENST00000475635 SF3B2Q13435 895 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms