RNA–Protein interactions for RNA: ENST00000475464.1

PTP4A2-204, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-204ENST00000475464 FOXO3O43524 673 aa15.31■□□□□ 0.04
PTP4A2-204ENST00000475464 XPCQ01831 940 aaPredicted RBP15.31■□□□□ 0.04
PTP4A2-204ENST00000475464 FOXD1Q16676 465 aa15.31■□□□□ 0.04
PTP4A2-204ENST00000475464 NUTM2FA1L443 756 aa15.3■□□□□ 0.04
PTP4A2-204ENST00000475464 RRBP1Q9P2E9 1410 aaKnown RBP15.29■□□□□ 0.04
PTP4A2-204ENST00000475464 RGL3Q3MIN7 710 aa15.29■□□□□ 0.04
PTP4A2-204ENST00000475464 WAPLQ7Z5K2 1190 aa15.28■□□□□ 0.04
PTP4A2-204ENST00000475464 KIF1BO60333 1816 aa15.28■□□□□ 0.04
PTP4A2-204ENST00000475464 ADGRF5Q8IZF2 1346 aa15.27■□□□□ 0.04
PTP4A2-204ENST00000475464 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
PTP4A2-204ENST00000475464 LRPPRCP42704 1394 aaKnown RBP15.26■□□□□ 0.03
PTP4A2-204ENST00000475464 ATRNO75882 1429 aa15.26■□□□□ 0.03
PTP4A2-204ENST00000475464 TMEM132EQ6IEE7 984 aa15.25■□□□□ 0.03
PTP4A2-204ENST00000475464 GJD4Q96KN9 370 aaPredicted RBP15.25■□□□□ 0.03
PTP4A2-204ENST00000475464 PRAG1Q86YV5 1406 aa15.25■□□□□ 0.03
PTP4A2-204ENST00000475464 CCDC125Q86Z20 511 aa15.23■□□□□ 0.03
PTP4A2-204ENST00000475464 LAMC1P11047 1609 aa15.23■□□□□ 0.03
PTP4A2-204ENST00000475464 MYOM2P54296 1465 aa15.22■□□□□ 0.03
PTP4A2-204ENST00000475464 HAP1P54257 671 aaPredicted RBP15.22■□□□□ 0.03
PTP4A2-204ENST00000475464 CCDC144AA2RUR9 1427 aa15.22■□□□□ 0.03
PTP4A2-204ENST00000475464 BCL9LQ86UU0 1499 aa15.21■□□□□ 0.03
PTP4A2-204ENST00000475464 PLEKHG5O94827 1062 aa15.21■□□□□ 0.03
PTP4A2-204ENST00000475464 KRT28Q7Z3Y7 464 aa15.21■□□□□ 0.03
PTP4A2-204ENST00000475464 UNC5CLQ8IV45 518 aa15.21■□□□□ 0.03
PTP4A2-204ENST00000475464 PXDNQ92626 1479 aa15.2■□□□□ 0.02
PTP4A2-204ENST00000475464 EP400Q96L91 3159 aa15.2■□□□□ 0.02
PTP4A2-204ENST00000475464 MPHOSPH9Q99550 1183 aa15.2■□□□□ 0.02
PTP4A2-204ENST00000475464 ABCC11Q96J66 1382 aa15.2■□□□□ 0.02
PTP4A2-204ENST00000475464 ANKRD30BQ9BXX2 1392 aa15.2■□□□□ 0.02
PTP4A2-204ENST00000475464 SPATA31A3Q5VYP0 1347 aa15.19■□□□□ 0.02
PTP4A2-204ENST00000475464 PLEKHH1Q9ULM0 1364 aa15.19■□□□□ 0.02
PTP4A2-204ENST00000475464 CDC42BPGQ6DT37 1551 aa15.19■□□□□ 0.02
PTP4A2-204ENST00000475464 PSME1Q06323 249 aa15.18■□□□□ 0.02
PTP4A2-204ENST00000475464 LMOD2Q6P5Q4 547 aa15.17■□□□□ 0.02
PTP4A2-204ENST00000475464 CCDC9Q9Y3X0 531 aaKnown RBP15.17■□□□□ 0.02
PTP4A2-204ENST00000475464 COL22A1Q8NFW1 1626 aaPredicted RBP15.17■□□□□ 0.02
PTP4A2-204ENST00000475464 TECPR2O15040 1411 aa15.17■□□□□ 0.02
PTP4A2-204ENST00000475464 PHF8Q9UPP1 1060 aa15.16■□□□□ 0.02
PTP4A2-204ENST00000475464 PPLO60437 1756 aa15.16■□□□□ 0.02
PTP4A2-204ENST00000475464 SF3B2Q13435 895 aaKnown RBP15.15■□□□□ 0.02
PTP4A2-204ENST00000475464 SAFB2Q14151 953 aaKnown RBP eCLIP15.15■□□□□ 0.029e-10■□□□□ 9.7
PTP4A2-204ENST00000475464 CABLES1Q8TDN4 633 aa15.15■□□□□ 0.02
PTP4A2-204ENST00000475464 SIRT1Q96EB6 747 aa15.15■□□□□ 0.02
PTP4A2-204ENST00000475464 SPATA31E1Q6ZUB1 1445 aa15.15■□□□□ 0.02
PTP4A2-204ENST00000475464 SEPT12Q8IYM1 358 aa15.14■□□□□ 0.01
PTP4A2-204ENST00000475464 C14orf93Q9H972 538 aaKnown RBP15.14■□□□□ 0.01
PTP4A2-204ENST00000475464 YTHDC2Q9H6S0 1430 aaKnown RBP15.14■□□□□ 0.01
PTP4A2-204ENST00000475464 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
PTP4A2-204ENST00000475464 CFAP70Q5T0N1 1121 aa15.13■□□□□ 0.01
PTP4A2-204ENST00000475464 DHX57Q6P158 1386 aaKnown RBP15.12■□□□□ 0.01
PTP4A2-204ENST00000475464 PIK3C2GO75747 1445 aa15.12■□□□□ 0.01
PTP4A2-204ENST00000475464 VPS72Q15906 364 aa15.12■□□□□ 0.01
PTP4A2-204ENST00000475464 DEFB132Q7Z7B7 95 aa15.12■□□□□ 0.01
PTP4A2-204ENST00000475464 PRAM1Q96QH2 718 aa15.12■□□□□ 0.01
PTP4A2-204ENST00000475464 POGKQ9P215 609 aa15.12■□□□□ 0.01
PTP4A2-204ENST00000475464 SLIT2O94813 1529 aa15.12■□□□□ 0.01
PTP4A2-204ENST00000475464 BLMP54132 1417 aaPredicted RBP15.11■□□□□ 0.01
PTP4A2-204ENST00000475464 A0A0G2JS52 829 aa15.11■□□□□ 0.01
PTP4A2-204ENST00000475464 MYT1Q01538 1121 aa15.11■□□□□ 0.01
PTP4A2-204ENST00000475464 PMFBP1Q8TBY8 1022 aa15.1■□□□□ 0.01
PTP4A2-204ENST00000475464 TNS3Q68CZ2 1445 aa15.09■□□□□ 0.01
PTP4A2-204ENST00000475464 KRT27Q7Z3Y8 459 aa15.09■□□□□ 0.01
PTP4A2-204ENST00000475464 FAM83GA6ND36 823 aa15.08■□□□□ 0
PTP4A2-204ENST00000475464 SBNO1A3KN83 1393 aa15.08■□□□□ 0
PTP4A2-204ENST00000475464 ONECUT3O60422 494 aaPredicted RBP15.07■□□□□ 0
PTP4A2-204ENST00000475464 ARHGEF10O15013 1369 aa15.07■□□□□ 0
PTP4A2-204ENST00000475464 ACIN1Q9UKV3 1341 aaKnown RBP15.06■□□□□ 0
PTP4A2-204ENST00000475464 GLI3P10071 1580 aa15.06■□□□□ 0
PTP4A2-204ENST00000475464 HIRIP3Q9BW71 556 aaPredicted RBP15.05■□□□□ -0
PTP4A2-204ENST00000475464 KIF1AQ12756 1690 aa15.05■□□□□ -0
PTP4A2-204ENST00000475464 FMN2Q9NZ56 1722 aa15.05■□□□□ -0
PTP4A2-204ENST00000475464 MARF1Q9Y4F3 1742 aaKnown RBP15.05■□□□□ -0
PTP4A2-204ENST00000475464 USP32Q8NFA0 1604 aa15.04■□□□□ -0
PTP4A2-204ENST00000475464 FAM98CQ17RN3 349 aaKnown RBP15.04■□□□□ -0
PTP4A2-204ENST00000475464 BTG4Q9NY30 223 aa15.04■□□□□ -0
PTP4A2-204ENST00000475464 TRAK1Q9UPV9 953 aa15.04■□□□□ -0
PTP4A2-204ENST00000475464 NRXN1Q9ULB1 1477 aa15.03■□□□□ -0
PTP4A2-204ENST00000475464 GPRASP1Q5JY77 1395 aa15.03■□□□□ -0
PTP4A2-204ENST00000475464 KNDC1Q76NI1 1749 aa15.03■□□□□ -0
PTP4A2-204ENST00000475464 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.03■□□□□ -0
PTP4A2-204ENST00000475464 MINK1Q8N4C8 1332 aaPredicted RBP15.02■□□□□ -0
PTP4A2-204ENST00000475464 PAK3O75914 559 aaPredicted RBP15.02■□□□□ -0
PTP4A2-204ENST00000475464 BAG6P46379 1132 aa15.02■□□□□ -0
PTP4A2-204ENST00000475464 KDM2AQ9Y2K7 1162 aa15.02■□□□□ -0
PTP4A2-204ENST00000475464 NGDNQ8NEJ9 315 aaKnown RBP15.01□□□□□ -0.01
PTP4A2-204ENST00000475464 ANKARQ7Z5J8 1434 aa15□□□□□ -0.01
PTP4A2-204ENST00000475464 PSDA5PKW4 1024 aaPredicted RBP15□□□□□ -0.01
PTP4A2-204ENST00000475464 IFT172Q9UG01 1749 aa15□□□□□ -0.01
PTP4A2-204ENST00000475464 WASLO00401 505 aaPredicted RBP14.98□□□□□ -0.01
PTP4A2-204ENST00000475464 FAM182BQ5T319 152 aa14.98□□□□□ -0.01
PTP4A2-204ENST00000475464 DCAF11Q8TEB1 546 aa14.98□□□□□ -0.01
PTP4A2-204ENST00000475464 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
PTP4A2-204ENST00000475464 EN1Q05925 392 aaPredicted RBP14.97□□□□□ -0.01
PTP4A2-204ENST00000475464 PRDM11Q9NQV5 511 aa14.97□□□□□ -0.01
PTP4A2-204ENST00000475464 PRR36Q9H6K5 1346 aa14.96□□□□□ -0.01
PTP4A2-204ENST00000475464 RGPD8O14715 1765 aaPredicted RBP14.96□□□□□ -0.02
PTP4A2-204ENST00000475464 SPATA31A5Q5VU36 1347 aa14.95□□□□□ -0.02
PTP4A2-204ENST00000475464 SPATA31A7Q8IWB4 1347 aa14.95□□□□□ -0.02
PTP4A2-204ENST00000475464 BRWD3Q6RI45 1802 aa14.95□□□□□ -0.02
PTP4A2-204ENST00000475464 HRCP23327 699 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms