RNA–Protein interactions for RNA: ENST00000475325.1

FRMD4A-205, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 875 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-205ENST00000475325 PTCH1Q13635 1447 aa13.12□□□□□ -0.31
FRMD4A-205ENST00000475325 MINK1Q8N4C8 1332 aaPredicted RBP13.12□□□□□ -0.31
FRMD4A-205ENST00000475325 WAPLQ7Z5K2 1190 aa13.11□□□□□ -0.31
FRMD4A-205ENST00000475325 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
FRMD4A-205ENST00000475325 ADGRB2O60241 1585 aa13.1□□□□□ -0.31
FRMD4A-205ENST00000475325 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
FRMD4A-205ENST00000475325 NCKAP5LQ9HCH0 1330 aa13.1□□□□□ -0.31
FRMD4A-205ENST00000475325 LMTK3Q96Q04 1460 aa13.1□□□□□ -0.31
FRMD4A-205ENST00000475325 PANK3Q9H999 370 aa13.09□□□□□ -0.31
FRMD4A-205ENST00000475325 AMOTL2Q9Y2J4 779 aa13.09□□□□□ -0.31
FRMD4A-205ENST00000475325 ATAD2Q6PL18 1390 aa13.07□□□□□ -0.32
FRMD4A-205ENST00000475325 PRKRIP1Q9H875 184 aaPredicted RBP13.07□□□□□ -0.32
FRMD4A-205ENST00000475325 NWD1Q149M9 1564 aa13.07□□□□□ -0.32
FRMD4A-205ENST00000475325 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
FRMD4A-205ENST00000475325 CCER2I3L3R5 266 aa13.06□□□□□ -0.32
FRMD4A-205ENST00000475325 PER1O15534 1290 aaPredicted RBP13.06□□□□□ -0.32
FRMD4A-205ENST00000475325 SRPK2P78362 688 aaKnown RBP13.06□□□□□ -0.32
FRMD4A-205ENST00000475325 CDK19Q9BWU1 502 aa13.06□□□□□ -0.32
FRMD4A-205ENST00000475325 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
FRMD4A-205ENST00000475325 STRCQ7RTU9 1775 aa13.05□□□□□ -0.32
FRMD4A-205ENST00000475325 WASLO00401 505 aaPredicted RBP13.04□□□□□ -0.32
FRMD4A-205ENST00000475325 KCNA6P17658 529 aa13.04□□□□□ -0.32
FRMD4A-205ENST00000475325 HSPA2P54652 639 aa13.04□□□□□ -0.32
FRMD4A-205ENST00000475325 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
FRMD4A-205ENST00000475325 KTN1Q86UP2 1357 aaKnown RBP13.04□□□□□ -0.32
FRMD4A-205ENST00000475325 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
FRMD4A-205ENST00000475325 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
FRMD4A-205ENST00000475325 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.32
FRMD4A-205ENST00000475325 NALCNQ8IZF0 1738 aa13.02□□□□□ -0.32
FRMD4A-205ENST00000475325 KNSTRNQ9Y448 316 aa13.02□□□□□ -0.33
FRMD4A-205ENST00000475325 ANKRD36BQ8N2N9 1353 aa13.02□□□□□ -0.33
FRMD4A-205ENST00000475325 ITSN1Q15811 1721 aa13.02□□□□□ -0.33
FRMD4A-205ENST00000475325 RALBP1Q15311 655 aa13.01□□□□□ -0.33
FRMD4A-205ENST00000475325 NPC1L1Q9UHC9 1359 aa13.01□□□□□ -0.33
FRMD4A-205ENST00000475325 AKAP12Q02952 1782 aa13□□□□□ -0.33
FRMD4A-205ENST00000475325 FMN2Q9NZ56 1722 aa13□□□□□ -0.33
FRMD4A-205ENST00000475325 NKTRP30414 1462 aaKnown RBP13□□□□□ -0.33
FRMD4A-205ENST00000475325 ATP7BP35670 1465 aa13□□□□□ -0.33
FRMD4A-205ENST00000475325 NSD3Q9BZ95 1437 aa13□□□□□ -0.33
FRMD4A-205ENST00000475325 PARD3Q8TEW0 1356 aa13□□□□□ -0.33
FRMD4A-205ENST00000475325 STRCP1A6NGW2 1772 aa12.99□□□□□ -0.33
FRMD4A-205ENST00000475325 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
FRMD4A-205ENST00000475325 CNGB1Q14028 1251 aaPredicted RBP12.99□□□□□ -0.33
FRMD4A-205ENST00000475325 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
FRMD4A-205ENST00000475325 CARD14Q9BXL6 1004 aa12.99□□□□□ -0.33
FRMD4A-205ENST00000475325 RGPD8O14715 1765 aaPredicted RBP12.99□□□□□ -0.33
FRMD4A-205ENST00000475325 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
FRMD4A-205ENST00000475325 PPIP5K1Q6PFW1 1433 aa12.98□□□□□ -0.33
FRMD4A-205ENST00000475325 A0A1W2PP64 1363 aa12.98□□□□□ -0.33
FRMD4A-205ENST00000475325 CC2D1BQ5T0F9 858 aaKnown RBP12.98□□□□□ -0.33
FRMD4A-205ENST00000475325 NUDT16Q96DE0 195 aaKnown RBP12.98□□□□□ -0.33
FRMD4A-205ENST00000475325 TERF2IPQ9NYB0 399 aa12.98□□□□□ -0.33
FRMD4A-205ENST00000475325 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
FRMD4A-205ENST00000475325 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
FRMD4A-205ENST00000475325 MYBBP1AQ9BQG0 1328 aaKnown RBP12.97□□□□□ -0.33
FRMD4A-205ENST00000475325 CABP1Q9NZU7 370 aa12.97□□□□□ -0.33
FRMD4A-205ENST00000475325 KIF20BQ96Q89 1820 aa12.97□□□□□ -0.33
FRMD4A-205ENST00000475325 ADGRL3Q9HAR2 1447 aa12.96□□□□□ -0.33
FRMD4A-205ENST00000475325 PRR36Q9H6K5 1346 aa12.96□□□□□ -0.33
FRMD4A-205ENST00000475325 HDGFL2Q7Z4V5 671 aaPredicted RBP12.96□□□□□ -0.33
FRMD4A-205ENST00000475325 CCDC61Q9Y6R9 512 aa12.96□□□□□ -0.33
FRMD4A-205ENST00000475325 ANKARQ7Z5J8 1434 aa12.96□□□□□ -0.34
FRMD4A-205ENST00000475325 MRS2Q9HD23 443 aa12.94□□□□□ -0.34
FRMD4A-205ENST00000475325 CPSF1Q10570 1443 aaKnown RBP12.94□□□□□ -0.34
FRMD4A-205ENST00000475325 BRD4O60885 1362 aaPredicted RBP12.94□□□□□ -0.34
FRMD4A-205ENST00000475325 NSD2O96028 1365 aa12.94□□□□□ -0.34
FRMD4A-205ENST00000475325 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
FRMD4A-205ENST00000475325 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
FRMD4A-205ENST00000475325 PROSER2Q86WR7 435 aaPredicted RBP12.93□□□□□ -0.34
FRMD4A-205ENST00000475325 NLRP13Q86W25 1043 aa12.92□□□□□ -0.34
FRMD4A-205ENST00000475325 XIRP1Q702N8 1843 aaKnown RBP12.92□□□□□ -0.34
FRMD4A-205ENST00000475325 NRKQ7Z2Y5 1582 aa12.91□□□□□ -0.34
FRMD4A-205ENST00000475325 EDC4Q6P2E9 1401 aaKnown RBP12.91□□□□□ -0.34
FRMD4A-205ENST00000475325 NCOA3Q9Y6Q9 1424 aa12.91□□□□□ -0.34
FRMD4A-205ENST00000475325 PLEKHG3A1L390 1219 aa12.91□□□□□ -0.34
FRMD4A-205ENST00000475325 NUTM2FA1L443 756 aa12.91□□□□□ -0.34
FRMD4A-205ENST00000475325 C14orf37Q86TY3 774 aa12.91□□□□□ -0.34
FRMD4A-205ENST00000475325 RBM33Q96EV2 1170 aaKnown RBP12.91□□□□□ -0.34
FRMD4A-205ENST00000475325 YTHDC1Q96MU7 727 aaKnown RBP12.91□□□□□ -0.34
FRMD4A-205ENST00000475325 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
FRMD4A-205ENST00000475325 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
FRMD4A-205ENST00000475325 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
FRMD4A-205ENST00000475325 TMEM94Q12767 1356 aa12.89□□□□□ -0.35
FRMD4A-205ENST00000475325 MORC1Q86VD1 984 aa12.88□□□□□ -0.35
FRMD4A-205ENST00000475325 POLR3AO14802 1390 aaPredicted RBP12.88□□□□□ -0.35
FRMD4A-205ENST00000475325 DCCP43146 1447 aa12.88□□□□□ -0.35
FRMD4A-205ENST00000475325 ACEP12821 1306 aa12.88□□□□□ -0.35
FRMD4A-205ENST00000475325 USP6P35125 1406 aa12.87□□□□□ -0.35
FRMD4A-205ENST00000475325 FYB1O15117 783 aa12.86□□□□□ -0.35
FRMD4A-205ENST00000475325 C19orf44Q9H6X5 657 aa12.86□□□□□ -0.35
FRMD4A-205ENST00000475325 LRRC7Q96NW7 1537 aa12.86□□□□□ -0.35
FRMD4A-205ENST00000475325 KIF1AQ12756 1690 aa12.86□□□□□ -0.35
FRMD4A-205ENST00000475325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.85□□□□□ -0.35
FRMD4A-205ENST00000475325 PMFBP1Q8TBY8 1022 aa12.85□□□□□ -0.35
FRMD4A-205ENST00000475325 GGNBP2Q9H3C7 697 aa12.85□□□□□ -0.35
FRMD4A-205ENST00000475325 ZNF335Q9H4Z2 1342 aaPredicted RBP12.85□□□□□ -0.35
FRMD4A-205ENST00000475325 FAM9BQ8IZU0 186 aa12.84□□□□□ -0.35
FRMD4A-205ENST00000475325 NGDNQ8NEJ9 315 aaKnown RBP12.84□□□□□ -0.35
FRMD4A-205ENST00000475325 PNISRQ8TF01 805 aaKnown RBP12.84□□□□□ -0.35
FRMD4A-205ENST00000475325 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms