RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 CCDC144AA2RUR9 1427 aa26.78■■□□□ 1.88
PCGF3-209ENST00000475288 SPATA31E1Q6ZUB1 1445 aa26.78■■□□□ 1.88
PCGF3-209ENST00000475288 ANKRD30BQ9BXX2 1392 aa26.77■■□□□ 1.88
PCGF3-209ENST00000475288 NPHP3Q7Z494 1330 aa26.77■■□□□ 1.88
PCGF3-209ENST00000475288 ADAMTS2O95450 1211 aa26.77■■□□□ 1.88
PCGF3-209ENST00000475288 FNBP4Q8N3X1 1017 aaPredicted RBP26.76■■□□□ 1.87
PCGF3-209ENST00000475288 KNDC1Q76NI1 1749 aa26.76■■□□□ 1.87
PCGF3-209ENST00000475288 MYOM2P54296 1465 aa26.75■■□□□ 1.87
PCGF3-209ENST00000475288 PXDNQ92626 1479 aa26.74■■□□□ 1.87
PCGF3-209ENST00000475288 LRPPRCP42704 1394 aaKnown RBP26.73■■□□□ 1.87
PCGF3-209ENST00000475288 ADGRF5Q8IZF2 1346 aa26.73■■□□□ 1.87
PCGF3-209ENST00000475288 ABCC11Q96J66 1382 aa26.72■■□□□ 1.87
PCGF3-209ENST00000475288 USP21Q9UK80 565 aa26.72■■□□□ 1.87
PCGF3-209ENST00000475288 TRPC5Q9UL62 973 aaPredicted RBP26.72■■□□□ 1.87
PCGF3-209ENST00000475288 ATRNO75882 1429 aa26.71■■□□□ 1.87
PCGF3-209ENST00000475288 FOXD1Q16676 465 aa26.7■■□□□ 1.86
PCGF3-209ENST00000475288 ESCO1Q5FWF5 840 aa26.7■■□□□ 1.86
PCGF3-209ENST00000475288 PIK3C2GO75747 1445 aa26.7■■□□□ 1.86
PCGF3-209ENST00000475288 MARF1Q9Y4F3 1742 aaKnown RBP26.7■■□□□ 1.86
PCGF3-209ENST00000475288 ATAD2Q6PL18 1390 aa26.68■■□□□ 1.86
PCGF3-209ENST00000475288 ACIN1Q9UKV3 1341 aaKnown RBP26.67■■□□□ 1.86
PCGF3-209ENST00000475288 FMN2Q9NZ56 1722 aa26.66■■□□□ 1.86
PCGF3-209ENST00000475288 MPHOSPH9Q99550 1183 aa26.66■■□□□ 1.86
PCGF3-209ENST00000475288 KIF1AQ12756 1690 aa26.65■■□□□ 1.86
PCGF3-209ENST00000475288 RGL3Q3MIN7 710 aa26.64■■□□□ 1.86
PCGF3-209ENST00000475288 BCL9LQ86UU0 1499 aa26.63■■□□□ 1.85
PCGF3-209ENST00000475288 FOXO3O43524 673 aa26.63■■□□□ 1.85
PCGF3-209ENST00000475288 WAPLQ7Z5K2 1190 aa26.63■■□□□ 1.85
PCGF3-209ENST00000475288 SIRT1Q96EB6 747 aa26.63■■□□□ 1.85
PCGF3-209ENST00000475288 YTHDC2Q9H6S0 1430 aaKnown RBP26.63■■□□□ 1.85
PCGF3-209ENST00000475288 STK26Q9P289 416 aa26.62■■□□□ 1.85
PCGF3-209ENST00000475288 EP400Q96L91 3159 aa26.62■■□□□ 1.85
PCGF3-209ENST00000475288 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.62■■□□□ 1.85
PCGF3-209ENST00000475288 PLEKHH1Q9ULM0 1364 aa26.6■■□□□ 1.85
PCGF3-209ENST00000475288 NRXN1Q9ULB1 1477 aa26.6■■□□□ 1.85
PCGF3-209ENST00000475288 TMEM132EQ6IEE7 984 aa26.58■■□□□ 1.85
PCGF3-209ENST00000475288 C14orf93Q9H972 538 aaKnown RBP26.56■■□□□ 1.84
PCGF3-209ENST00000475288 SPATA31A3Q5VYP0 1347 aa26.56■■□□□ 1.84
PCGF3-209ENST00000475288 XPCQ01831 940 aaPredicted RBP26.55■■□□□ 1.84
PCGF3-209ENST00000475288 SLIT2O94813 1529 aa26.55■■□□□ 1.84
PCGF3-209ENST00000475288 SRCAPQ6ZRS2 3230 aa26.54■■□□□ 1.84
PCGF3-209ENST00000475288 NUTM2FA1L443 756 aa26.53■■□□□ 1.84
PCGF3-209ENST00000475288 GJD4Q96KN9 370 aaPredicted RBP26.53■■□□□ 1.84
PCGF3-209ENST00000475288 CCDC125Q86Z20 511 aa26.52■■□□□ 1.84
PCGF3-209ENST00000475288 USP32Q8NFA0 1604 aa26.52■■□□□ 1.84
PCGF3-209ENST00000475288 DHX57Q6P158 1386 aaKnown RBP26.5■■□□□ 1.83
PCGF3-209ENST00000475288 UNC5CLQ8IV45 518 aa26.49■■□□□ 1.83
PCGF3-209ENST00000475288 DLC1Q96QB1 1528 aa26.49■■□□□ 1.83
PCGF3-209ENST00000475288 TNS3Q68CZ2 1445 aa26.48■■□□□ 1.83
PCGF3-209ENST00000475288 KRT28Q7Z3Y7 464 aa26.48■■□□□ 1.83
PCGF3-209ENST00000475288 RGPD8O14715 1765 aaPredicted RBP26.48■■□□□ 1.83
PCGF3-209ENST00000475288 GLI3P10071 1580 aa26.47■■□□□ 1.83
PCGF3-209ENST00000475288 SBNO1A3KN83 1393 aa26.46■■□□□ 1.83
PCGF3-209ENST00000475288 PHF8Q9UPP1 1060 aa26.46■■□□□ 1.83
PCGF3-209ENST00000475288 RALGAPBQ86X10 1494 aa26.46■■□□□ 1.83
PCGF3-209ENST00000475288 PSME1Q06323 249 aa26.45■■□□□ 1.82
PCGF3-209ENST00000475288 ADGRB2O60241 1585 aa26.45■■□□□ 1.82
PCGF3-209ENST00000475288 CFAP70Q5T0N1 1121 aa26.44■■□□□ 1.82
PCGF3-209ENST00000475288 ANKARQ7Z5J8 1434 aa26.44■■□□□ 1.82
PCGF3-209ENST00000475288 NWD2Q9ULI1 1742 aa26.44■■□□□ 1.82
PCGF3-209ENST00000475288 ARHGEF10O15013 1369 aa26.42■■□□□ 1.82
PCGF3-209ENST00000475288 ABCA3Q99758 1704 aa26.42■■□□□ 1.82
PCGF3-209ENST00000475288 PRAM1Q96QH2 718 aa26.4■■□□□ 1.82
PCGF3-209ENST00000475288 ZRANB1Q9UGI0 708 aa26.4■■□□□ 1.82
PCGF3-209ENST00000475288 ADGRB1O14514 1584 aa26.4■■□□□ 1.82
PCGF3-209ENST00000475288 PLCH1Q4KWH8 1693 aa26.39■■□□□ 1.82
PCGF3-209ENST00000475288 BLMP54132 1417 aaPredicted RBP26.38■■□□□ 1.81
PCGF3-209ENST00000475288 VPS72Q15906 364 aa26.37■■□□□ 1.81
PCGF3-209ENST00000475288 BRWD3Q6RI45 1802 aa26.35■■□□□ 1.81
PCGF3-209ENST00000475288 HAP1P54257 671 aaPredicted RBP26.35■■□□□ 1.81
PCGF3-209ENST00000475288 EIF3AQ14152 1382 aaKnown RBP26.34■■□□□ 1.81
PCGF3-209ENST00000475288 ONECUT3O60422 494 aaPredicted RBP26.34■■□□□ 1.81
PCGF3-209ENST00000475288 POGKQ9P215 609 aa26.34■■□□□ 1.81
PCGF3-209ENST00000475288 TRPM3Q9HCF6 1732 aaPredicted RBP26.34■■□□□ 1.81
PCGF3-209ENST00000475288 RAB3GAP2Q9H2M9 1393 aa26.33■■□□□ 1.81
PCGF3-209ENST00000475288 STAC3Q96MF2 364 aa26.32■■□□□ 1.8
PCGF3-209ENST00000475288 SAFB2Q14151 953 aaKnown RBP eCLIP26.31■■□□□ 1.8
PCGF3-209ENST00000475288 CABLES1Q8TDN4 633 aa26.31■■□□□ 1.8
PCGF3-209ENST00000475288 ALS2Q96Q42 1657 aa26.3■■□□□ 1.8
PCGF3-209ENST00000475288 TULP4Q9NRJ4 1543 aa26.29■■□□□ 1.8
PCGF3-209ENST00000475288 NRAPQ86VF7 1730 aa26.29■■□□□ 1.8
PCGF3-209ENST00000475288 SEPT12Q8IYM1 358 aa26.29■■□□□ 1.8
PCGF3-209ENST00000475288 PMFBP1Q8TBY8 1022 aa26.27■■□□□ 1.8
PCGF3-209ENST00000475288 LMOD2Q6P5Q4 547 aa26.26■■□□□ 1.79
PCGF3-209ENST00000475288 GPRASP1Q5JY77 1395 aa26.25■■□□□ 1.79
PCGF3-209ENST00000475288 FAM83GA6ND36 823 aa26.25■■□□□ 1.79
PCGF3-209ENST00000475288 COL14A1Q05707 1796 aaKnown RBP26.25■■□□□ 1.79
PCGF3-209ENST00000475288 PRR36Q9H6K5 1346 aa26.23■■□□□ 1.79
PCGF3-209ENST00000475288 TRAK1Q9UPV9 953 aa26.23■■□□□ 1.79
PCGF3-209ENST00000475288 CRYBG1Q9Y4K1 1723 aa26.22■■□□□ 1.79
PCGF3-209ENST00000475288 WASLO00401 505 aaPredicted RBP26.22■■□□□ 1.79
PCGF3-209ENST00000475288 KRT27Q7Z3Y8 459 aa26.22■■□□□ 1.79
PCGF3-209ENST00000475288 SF3B2Q13435 895 aaKnown RBP26.21■■□□□ 1.79
PCGF3-209ENST00000475288 CCDC9Q9Y3X0 531 aaKnown RBP26.21■■□□□ 1.79
PCGF3-209ENST00000475288 HRCP23327 699 aa26.2■■□□□ 1.78
PCGF3-209ENST00000475288 HIRIP3Q9BW71 556 aaPredicted RBP26.2■■□□□ 1.78
PCGF3-209ENST00000475288 MINK1Q8N4C8 1332 aaPredicted RBP26.19■■□□□ 1.78
PCGF3-209ENST00000475288 DCAF11Q8TEB1 546 aa26.19■■□□□ 1.78
PCGF3-209ENST00000475288 ITSN1Q15811 1721 aa26.19■■□□□ 1.78
PCGF3-209ENST00000475288 ARHGEF28Q8N1W1 1705 aaKnown RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms