RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 NRXN1Q9ULB1 1477 aa18.02■□□□□ 0.48
SSR1-205ENST00000475213 TMEM132EQ6IEE7 984 aa18.02■□□□□ 0.48
SSR1-205ENST00000475213 KNDC1Q76NI1 1749 aa18.02■□□□□ 0.48
SSR1-205ENST00000475213 STK26Q9P289 416 aa18.02■□□□□ 0.48
SSR1-205ENST00000475213 SHPRHQ149N8 1683 aa18.02■□□□□ 0.47
SSR1-205ENST00000475213 LRPPRCP42704 1394 aaKnown RBP18.02■□□□□ 0.47
SSR1-205ENST00000475213 C1orf167Q5SNV9 1468 aa18.01■□□□□ 0.47
SSR1-205ENST00000475213 TECPR2O15040 1411 aa18.01■□□□□ 0.47
SSR1-205ENST00000475213 SLC4A2P04920 1241 aa18■□□□□ 0.47
SSR1-205ENST00000475213 C14orf93Q9H972 538 aaKnown RBP18■□□□□ 0.47
SSR1-205ENST00000475213 ABCC11Q96J66 1382 aa18■□□□□ 0.47
SSR1-205ENST00000475213 YTHDC2Q9H6S0 1430 aaKnown RBP17.98■□□□□ 0.47
SSR1-205ENST00000475213 LAMC1P11047 1609 aa17.98■□□□□ 0.47
SSR1-205ENST00000475213 WAPLQ7Z5K2 1190 aa17.98■□□□□ 0.47
SSR1-205ENST00000475213 DDX17Q92841 729 aaKnown RBP17.98■□□□□ 0.47
SSR1-205ENST00000475213 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
SSR1-205ENST00000475213 SPATA31A6Q5VVP1 1343 aa17.98■□□□□ 0.47
SSR1-205ENST00000475213 CDC42BPGQ6DT37 1551 aa17.97■□□□□ 0.47
SSR1-205ENST00000475213 CFAP70Q5T0N1 1121 aa17.97■□□□□ 0.47
SSR1-205ENST00000475213 PLEKHH1Q9ULM0 1364 aa17.96■□□□□ 0.47
SSR1-205ENST00000475213 LRP6O75581 1613 aa17.96■□□□□ 0.47
SSR1-205ENST00000475213 ORAI2Q96SN7 254 aa17.95■□□□□ 0.46
SSR1-205ENST00000475213 LRRC59Q96AG4 307 aaKnown RBP17.94■□□□□ 0.46
SSR1-205ENST00000475213 DHX57Q6P158 1386 aaKnown RBP17.93■□□□□ 0.46
SSR1-205ENST00000475213 POTEAQ6S8J7 498 aa17.93■□□□□ 0.46
SSR1-205ENST00000475213 SIRT1Q96EB6 747 aa17.93■□□□□ 0.46
SSR1-205ENST00000475213 KDM2AQ9Y2K7 1162 aa17.93■□□□□ 0.46
SSR1-205ENST00000475213 DCAF11Q8TEB1 546 aa17.92■□□□□ 0.46
SSR1-205ENST00000475213 MEX3CQ5U5Q3 659 aaKnown RBP17.91■□□□□ 0.46
SSR1-205ENST00000475213 FMN2Q9NZ56 1722 aa17.89■□□□□ 0.46
SSR1-205ENST00000475213 ADGRB1O14514 1584 aa17.89■□□□□ 0.45
SSR1-205ENST00000475213 NUTM2BA6NNL0 878 aaPredicted RBP17.89■□□□□ 0.45
SSR1-205ENST00000475213 NUTM2EB1AL46 878 aaPredicted RBP17.89■□□□□ 0.45
SSR1-205ENST00000475213 ESCO1Q5FWF5 840 aa17.89■□□□□ 0.45
SSR1-205ENST00000475213 NUTM2AQ8IVF1 878 aaPredicted RBP17.89■□□□□ 0.45
SSR1-205ENST00000475213 STAC3Q96MF2 364 aa17.89■□□□□ 0.45
SSR1-205ENST00000475213 SOS2Q07890 1332 aaPredicted RBP17.89■□□□□ 0.45
SSR1-205ENST00000475213 PNPLA6Q8IY17 1366 aa17.89■□□□□ 0.45
SSR1-205ENST00000475213 NUTM2FA1L443 756 aa17.88■□□□□ 0.45
SSR1-205ENST00000475213 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
SSR1-205ENST00000475213 PRAM1Q96QH2 718 aa17.87■□□□□ 0.45
SSR1-205ENST00000475213 RGPD8O14715 1765 aaPredicted RBP17.86■□□□□ 0.45
SSR1-205ENST00000475213 SAFB2Q14151 953 aaKnown RBP eCLIP17.85■□□□□ 0.45
SSR1-205ENST00000475213 NPHP3Q7Z494 1330 aa17.85■□□□□ 0.45
SSR1-205ENST00000475213 POGKQ9P215 609 aa17.84■□□□□ 0.45
SSR1-205ENST00000475213 TRAK1Q9UPV9 953 aa17.84■□□□□ 0.45
SSR1-205ENST00000475213 PXDNQ92626 1479 aa17.83■□□□□ 0.45
SSR1-205ENST00000475213 FOXO3O43524 673 aa17.83■□□□□ 0.44
SSR1-205ENST00000475213 ZNF772Q68DY9 489 aaPredicted RBP17.83■□□□□ 0.44
SSR1-205ENST00000475213 KIF1AQ12756 1690 aa17.82■□□□□ 0.44
SSR1-205ENST00000475213 COL22A1Q8NFW1 1626 aaPredicted RBP17.81■□□□□ 0.44
SSR1-205ENST00000475213 XPCQ01831 940 aaPredicted RBP17.81■□□□□ 0.44
SSR1-205ENST00000475213 AFF2P51816 1311 aa17.8■□□□□ 0.44
SSR1-205ENST00000475213 ADGRB2O60241 1585 aa17.8■□□□□ 0.44
SSR1-205ENST00000475213 C8orf37Q96NL8 207 aa17.79■□□□□ 0.44
SSR1-205ENST00000475213 ARHGEF28Q8N1W1 1705 aaKnown RBP17.78■□□□□ 0.44
SSR1-205ENST00000475213 KIAA1210Q9ULL0 1709 aa17.78■□□□□ 0.44
SSR1-205ENST00000475213 ADAMTS2O95450 1211 aa17.78■□□□□ 0.44
SSR1-205ENST00000475213 USP32Q8NFA0 1604 aa17.78■□□□□ 0.44
SSR1-205ENST00000475213 HIRIP3Q9BW71 556 aaPredicted RBP17.77■□□□□ 0.44
SSR1-205ENST00000475213 PHF8Q9UPP1 1060 aa17.77■□□□□ 0.44
SSR1-205ENST00000475213 MINK1Q8N4C8 1332 aaPredicted RBP17.76■□□□□ 0.43
SSR1-205ENST00000475213 ANKARQ7Z5J8 1434 aa17.75■□□□□ 0.43
SSR1-205ENST00000475213 KRT28Q7Z3Y7 464 aa17.74■□□□□ 0.43
SSR1-205ENST00000475213 NGLY1Q96IV0 654 aa17.74■□□□□ 0.43
SSR1-205ENST00000475213 MARF1Q9Y4F3 1742 aaKnown RBP17.74■□□□□ 0.43
SSR1-205ENST00000475213 SPATA31A3Q5VYP0 1347 aa17.73■□□□□ 0.43
SSR1-205ENST00000475213 RXRBP28702 533 aa17.73■□□□□ 0.43
SSR1-205ENST00000475213 SIN3AQ96ST3 1273 aa17.73■□□□□ 0.43
SSR1-205ENST00000475213 WASLO00401 505 aaPredicted RBP17.72■□□□□ 0.43
SSR1-205ENST00000475213 NBPF1Q3BBV0 1214 aa17.72■□□□□ 0.43
SSR1-205ENST00000475213 TULP4Q9NRJ4 1543 aa17.72■□□□□ 0.43
SSR1-205ENST00000475213 PMFBP1Q8TBY8 1022 aa17.71■□□□□ 0.43
SSR1-205ENST00000475213 QTRT2Q9H974 415 aaKnown RBP17.71■□□□□ 0.43
SSR1-205ENST00000475213 PRR36Q9H6K5 1346 aa17.71■□□□□ 0.42
SSR1-205ENST00000475213 EIF3AQ14152 1382 aaKnown RBP17.7■□□□□ 0.42
SSR1-205ENST00000475213 PSME1Q06323 249 aa17.7■□□□□ 0.42
SSR1-205ENST00000475213 L3MBTL2Q969R5 705 aa17.7■□□□□ 0.42
SSR1-205ENST00000475213 TNS3Q68CZ2 1445 aa17.7■□□□□ 0.42
SSR1-205ENST00000475213 SBNO1A3KN83 1393 aa17.68■□□□□ 0.42
SSR1-205ENST00000475213 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
SSR1-205ENST00000475213 FNBP4Q8N3X1 1017 aaPredicted RBP17.68■□□□□ 0.42
SSR1-205ENST00000475213 USP21Q9UK80 565 aa17.68■□□□□ 0.42
SSR1-205ENST00000475213 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
SSR1-205ENST00000475213 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
SSR1-205ENST00000475213 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
SSR1-205ENST00000475213 TRPM3Q9HCF6 1732 aaPredicted RBP17.67■□□□□ 0.42
SSR1-205ENST00000475213 RBM6P78332 1123 aaKnown RBP17.66■□□□□ 0.42
SSR1-205ENST00000475213 ATP7BP35670 1465 aa17.65■□□□□ 0.42
SSR1-205ENST00000475213 LMOD2Q6P5Q4 547 aa17.64■□□□□ 0.41
SSR1-205ENST00000475213 NUDT16Q96DE0 195 aaKnown RBP17.64■□□□□ 0.41
SSR1-205ENST00000475213 CDK19Q9BWU1 502 aa17.64■□□□□ 0.41
SSR1-205ENST00000475213 TRPM1Q7Z4N2 1603 aa17.64■□□□□ 0.41
SSR1-205ENST00000475213 ARHGEF10O15013 1369 aa17.64■□□□□ 0.41
SSR1-205ENST00000475213 ABCA3Q99758 1704 aa17.64■□□□□ 0.41
SSR1-205ENST00000475213 BCL9LQ86UU0 1499 aa17.63■□□□□ 0.41
SSR1-205ENST00000475213 TRIM26Q12899 539 aaPredicted RBP17.63■□□□□ 0.41
SSR1-205ENST00000475213 CABLES1Q8TDN4 633 aa17.63■□□□□ 0.41
SSR1-205ENST00000475213 TRPC5Q9UL62 973 aaPredicted RBP17.63■□□□□ 0.41
SSR1-205ENST00000475213 ALS2Q96Q42 1657 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms